RNA–Protein interactions for RNA: ENST00000537004.5

CLIP1-208, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 2,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-208ENST00000537004 SCGB1D1O95968 90 aa8.98□□□□□ -0.97
CLIP1-208ENST00000537004 HBBP68871 147 aa8.98□□□□□ -0.97
CLIP1-208ENST00000537004 DEFB121Q5J5C9 76 aa8.98□□□□□ -0.97
CLIP1-208ENST00000537004 FAM162BQ5T6X4 162 aa8.98□□□□□ -0.97
CLIP1-208ENST00000537004 SVIPQ8NHG7 77 aa8.98□□□□□ -0.97
CLIP1-208ENST00000537004 ERCC8Q13216 396 aa8.97□□□□□ -0.97
CLIP1-208ENST00000537004 MRPL53Q96EL3 112 aaKnown RBP8.97□□□□□ -0.97
CLIP1-208ENST00000537004 C20orf144Q9BQM9 153 aa8.97□□□□□ -0.97
CLIP1-208ENST00000537004 DAZ1Q9NQZ3 744 aaKnown RBP8.97□□□□□ -0.97
CLIP1-208ENST00000537004 TP53TG3Q9ULZ0 132 aa8.97□□□□□ -0.97
CLIP1-208ENST00000537004 NUPR1O60356 82 aa8.97□□□□□ -0.97
CLIP1-208ENST00000537004 SH2D1AO60880 128 aa8.97□□□□□ -0.97
CLIP1-208ENST00000537004 NPSP0C0P6 89 aa8.97□□□□□ -0.97
CLIP1-208ENST00000537004 FOXA3P55318 350 aaPredicted RBP8.97□□□□□ -0.97
CLIP1-208ENST00000537004 Q0VG73 95 aa8.97□□□□□ -0.97
CLIP1-208ENST00000537004 TM4SF20Q53R12 229 aa8.97□□□□□ -0.97
CLIP1-208ENST00000537004 C16orf92Q96LL3 132 aa8.97□□□□□ -0.97
CLIP1-208ENST00000537004 NDFIP1Q9BT67 221 aa8.97□□□□□ -0.97
CLIP1-208ENST00000537004 SSBP4Q9BWG4 385 aaPredicted RBP8.97□□□□□ -0.97
CLIP1-208ENST00000537004 IGHV7-4-1A0A0J9YVY3 117 aa8.96□□□□□ -0.98
CLIP1-208ENST00000537004 OVOL1O14753 267 aa8.96□□□□□ -0.98
CLIP1-208ENST00000537004 SRIP30626 198 aa8.96□□□□□ -0.98
CLIP1-208ENST00000537004 FAM106AQ4KMX7 169 aa8.96□□□□□ -0.98
CLIP1-208ENST00000537004 C9orf66Q5T8R8 295 aa8.96□□□□□ -0.98
CLIP1-208ENST00000537004 BAGE3Q86Y29 109 aa8.96□□□□□ -0.98
CLIP1-208ENST00000537004 GPHB5Q86YW7 130 aa8.96□□□□□ -0.98
CLIP1-208ENST00000537004 MIEN1Q9BRT3 115 aa8.96□□□□□ -0.98
CLIP1-208ENST00000537004 CLEC5AQ9NY25 188 aa8.96□□□□□ -0.98
CLIP1-208ENST00000537004 TMEM189A5PLL7 270 aa8.95□□□□□ -0.98
CLIP1-208ENST00000537004 F2Z2F3 143 aa8.95□□□□□ -0.98
CLIP1-208ENST00000537004 SERF1AO75920 110 aa8.95□□□□□ -0.98
CLIP1-208ENST00000537004 ZNF80P51504 273 aaPredicted RBP8.95□□□□□ -0.98
CLIP1-208ENST00000537004 LINC00310P59036 64 aa8.95□□□□□ -0.98
CLIP1-208ENST00000537004 ZNF705AQ6ZN79 300 aaPredicted RBP8.95□□□□□ -0.98
CLIP1-208ENST00000537004 RHPN1-AS1Q9BWJ2 59 aa8.95□□□□□ -0.98
CLIP1-208ENST00000537004 K7EMT4 169 aa8.95□□□□□ -0.98
CLIP1-208ENST00000537004 SAP30O75446 220 aa8.95□□□□□ -0.98
CLIP1-208ENST00000537004 C21orf62-AS1Q17RA5 79 aa8.95□□□□□ -0.98
CLIP1-208ENST00000537004 OR10J3Q5JRS4 329 aa8.95□□□□□ -0.98
CLIP1-208ENST00000537004 AGPAT4-IT1Q9H0P7 198 aa8.95□□□□□ -0.98
CLIP1-208ENST00000537004 DNAH9Q9NYC9 4486 aa8.94□□□□□ -0.98
CLIP1-208ENST00000537004 A0A1B0GUT8 65 aa8.94□□□□□ -0.98
CLIP1-208ENST00000537004 SOCS3O14543 225 aa8.94□□□□□ -0.98
CLIP1-208ENST00000537004 ESDP10768 282 aa8.94□□□□□ -0.98
CLIP1-208ENST00000537004 BMI1P35226 326 aa8.94□□□□□ -0.98
CLIP1-208ENST00000537004 RPL11P62913 178 aaKnown RBP8.94□□□□□ -0.98
CLIP1-208ENST00000537004 TMEM78Q5T7P6 136 aa8.94□□□□□ -0.98
CLIP1-208ENST00000537004 Q6AWC8 147 aa8.94□□□□□ -0.98
CLIP1-208ENST00000537004 C20orf173Q96LM9 149 aa8.94□□□□□ -0.98
CLIP1-208ENST00000537004 NRN1Q9NPD7 142 aa8.94□□□□□ -0.98
CLIP1-208ENST00000537004 SMPXQ9UHP9 88 aa8.94□□□□□ -0.98
CLIP1-208ENST00000537004 SORL1Q92673 2214 aa8.94□□□□□ -0.98
CLIP1-208ENST00000537004 TMSB15BA0A087X1C1 80 aa8.93□□□□□ -0.98
CLIP1-208ENST00000537004 ARMS2P0C7Q2 107 aa8.93□□□□□ -0.98
CLIP1-208ENST00000537004 ZNF705DP0CH99 300 aaPredicted RBP8.93□□□□□ -0.98
CLIP1-208ENST00000537004 ZNF705BP0CI00 300 aaPredicted RBP8.93□□□□□ -0.98
CLIP1-208ENST00000537004 ZNF138P52744 262 aa8.93□□□□□ -0.98
CLIP1-208ENST00000537004 C9orf47Q6ZRZ4 202 aa8.93□□□□□ -0.98
CLIP1-208ENST00000537004 ZNF738Q8NE65 137 aa8.93□□□□□ -0.98
CLIP1-208ENST00000537004 UFC1Q9Y3C8 167 aa8.93□□□□□ -0.98
CLIP1-208ENST00000537004 EDN2P20800 178 aa8.93□□□□□ -0.98
CLIP1-208ENST00000537004 SYNJ2BPP57105 145 aa8.93□□□□□ -0.98
CLIP1-208ENST00000537004 PAFAH1B2P68402 229 aa8.93□□□□□ -0.98
CLIP1-208ENST00000537004 TEX43Q6ZNM6 134 aa8.93□□□□□ -0.98
CLIP1-208ENST00000537004 TPPP3Q9BW30 176 aa8.93□□□□□ -0.98
CLIP1-208ENST00000537004 FABP5P3A8MUU1 101 aa8.92□□□□□ -0.98
CLIP1-208ENST00000537004 RIGQ13278 110 aa8.92□□□□□ -0.98
CLIP1-208ENST00000537004 C18orf32Q8TCD1 76 aa8.92□□□□□ -0.98
CLIP1-208ENST00000537004 RCHY1Q96PM5 261 aa8.92□□□□□ -0.98
CLIP1-208ENST00000537004 ALKBH7Q9BT30 221 aaPredicted RBP8.92□□□□□ -0.98
CLIP1-208ENST00000537004 SELENOKQ9Y6D0 94 aa8.92□□□□□ -0.98
CLIP1-208ENST00000537004 IGKV3-7A0A075B6H7 116 aa8.92□□□□□ -0.98
CLIP1-208ENST00000537004 RPS20P60866 119 aaKnown RBP8.92□□□□□ -0.98
CLIP1-208ENST00000537004 KLF5Q13887 457 aaPredicted RBP8.92□□□□□ -0.98
CLIP1-208ENST00000537004 COL5A1-AS1Q5SY13 56 aa8.92□□□□□ -0.98
CLIP1-208ENST00000537004 LYZL1Q6UWQ5 148 aa8.92□□□□□ -0.98
CLIP1-208ENST00000537004 BORCS7Q96B45 105 aa8.92□□□□□ -0.98
CLIP1-208ENST00000537004 A0A1B0GW15 77 aa8.91□□□□□ -0.98
CLIP1-208ENST00000537004 TMEM213A2RRL7 107 aa8.91□□□□□ -0.98
CLIP1-208ENST00000537004 ORM1P02763 201 aa8.91□□□□□ -0.98
CLIP1-208ENST00000537004 DMRTA1Q5VZB9 504 aa8.91□□□□□ -0.98
CLIP1-208ENST00000537004 ZNF256Q9Y2P7 627 aaPredicted RBP8.91□□□□□ -0.98
CLIP1-208ENST00000537004 LOC102724200A0A096LPH7 203 aaPredicted RBP8.9□□□□□ -0.98
CLIP1-208ENST00000537004 INSL3P51460 131 aa8.9□□□□□ -0.98
CLIP1-208ENST00000537004 KCNS1Q96KK3 526 aa8.9□□□□□ -0.98
CLIP1-208ENST00000537004 LINC01559Q495D7 138 aa8.9□□□□□ -0.99
CLIP1-208ENST00000537004 ZNF575Q86XF7 245 aa8.9□□□□□ -0.99
CLIP1-208ENST00000537004 OR10J6PQ8NGY7 276 aa8.9□□□□□ -0.99
CLIP1-208ENST00000537004 SAMD10Q9BYL1 202 aa8.9□□□□□ -0.99
CLIP1-208ENST00000537004 TENM3Q9P273 2699 aa8.9□□□□□ -0.99
CLIP1-208ENST00000537004 STAB2Q8WWQ8 2551 aa8.89□□□□□ -0.99
CLIP1-208ENST00000537004 AGRNO00468 2067 aa8.89□□□□□ -0.99
CLIP1-208ENST00000537004 LGALS9O00182 355 aa8.89□□□□□ -0.99
CLIP1-208ENST00000537004 CTRLP40313 264 aa8.89□□□□□ -0.99
CLIP1-208ENST00000537004 HIST1H1AQ02539 215 aaPredicted RBP8.89□□□□□ -0.99
CLIP1-208ENST00000537004 FER1L6-AS1Q8NA97 138 aa8.89□□□□□ -0.99
CLIP1-208ENST00000537004 GATD1Q8NB37 220 aa8.89□□□□□ -0.99
CLIP1-208ENST00000537004 OR9G4Q8NGQ1 327 aa8.89□□□□□ -0.99
CLIP1-208ENST00000537004 LENEPQ9Y5L5 61 aa8.89□□□□□ -0.99
CLIP1-208ENST00000537004 NBEAL2Q6ZNJ1 2754 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms