RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 TCRAP04437 139 aa9.79□□□□□ -0.84
RTN3P1-201ENST00000536295 GYPEP15421 78 aa9.79□□□□□ -0.84
RTN3P1-201ENST00000536295 SRIP30626 198 aa9.79□□□□□ -0.84
RTN3P1-201ENST00000536295 LINC00315P59091 139 aa9.79□□□□□ -0.84
RTN3P1-201ENST00000536295 SERF2P84101 59 aa9.79□□□□□ -0.84
RTN3P1-201ENST00000536295 RPL7L1Q6DKI1 246 aaKnown RBP9.79□□□□□ -0.84
RTN3P1-201ENST00000536295 NEGR1Q7Z3B1 354 aa9.79□□□□□ -0.84
RTN3P1-201ENST00000536295 C5orf17Q8NAS9 161 aa9.79□□□□□ -0.84
RTN3P1-201ENST00000536295 OR4C5Q8NGB2 326 aa9.79□□□□□ -0.84
RTN3P1-201ENST00000536295 PCNPQ8WW12 178 aaKnown RBP9.79□□□□□ -0.84
RTN3P1-201ENST00000536295 ACTR3CQ9C0K3 210 aaPredicted RBP9.79□□□□□ -0.84
RTN3P1-201ENST00000536295 TRAV4A0A0B4J268 109 aa9.78□□□□□ -0.84
RTN3P1-201ENST00000536295 SERTM2A0A1B0GWG4 89 aa9.78□□□□□ -0.84
RTN3P1-201ENST00000536295 K7EQD1 137 aa9.78□□□□□ -0.84
RTN3P1-201ENST00000536295 K7EQM0 130 aa9.78□□□□□ -0.84
RTN3P1-201ENST00000536295 M0R2P5 195 aa9.78□□□□□ -0.84
RTN3P1-201ENST00000536295 CXorf1O96002 111 aa9.78□□□□□ -0.84
RTN3P1-201ENST00000536295 SUMO1P63165 101 aaKnown RBP9.78□□□□□ -0.84
RTN3P1-201ENST00000536295 ASB13Q8WXK3 278 aa9.78□□□□□ -0.84
RTN3P1-201ENST00000536295 TMEM167BQ9NRX6 74 aa9.78□□□□□ -0.84
RTN3P1-201ENST00000536295 ABCA13Q86UQ4 5058 aa9.77□□□□□ -0.84
RTN3P1-201ENST00000536295 BORCS7-ASMTA0A0B4J1R7 106 aa9.77□□□□□ -0.85
RTN3P1-201ENST00000536295 RNF222A6NCQ9 220 aa9.77□□□□□ -0.85
RTN3P1-201ENST00000536295 GGTLC3B5MD39 225 aa9.77□□□□□ -0.85
RTN3P1-201ENST00000536295 ZNF80P51504 273 aaPredicted RBP9.77□□□□□ -0.85
RTN3P1-201ENST00000536295 PRNTQ86SH4 94 aa9.77□□□□□ -0.85
RTN3P1-201ENST00000536295 OR2T35Q8NGX2 323 aa9.77□□□□□ -0.85
RTN3P1-201ENST00000536295 SUN5Q8TC36 379 aa9.77□□□□□ -0.85
RTN3P1-201ENST00000536295 KCNS1Q96KK3 526 aa9.77□□□□□ -0.85
RTN3P1-201ENST00000536295 TNFSF18Q9UNG2 199 aa9.77□□□□□ -0.85
RTN3P1-201ENST00000536295 PSG8Q9UQ74 426 aa9.77□□□□□ -0.85
RTN3P1-201ENST00000536295 LOC100131303A0A0U1RQF7 123 aa9.76□□□□□ -0.85
RTN3P1-201ENST00000536295 C9JCJ5 164 aa9.76□□□□□ -0.85
RTN3P1-201ENST00000536295 GCGP01275 180 aa9.76□□□□□ -0.85
RTN3P1-201ENST00000536295 ORM1P02763 201 aa9.76□□□□□ -0.85
RTN3P1-201ENST00000536295 FLI1Q01543 452 aaPredicted RBP9.76□□□□□ -0.85
RTN3P1-201ENST00000536295 C11orf21Q9P2W6 132 aa9.76□□□□□ -0.85
RTN3P1-201ENST00000536295 EPDR1Q9UM22 224 aa9.76□□□□□ -0.85
RTN3P1-201ENST00000536295 TNFRSF18Q9Y5U5 241 aa9.76□□□□□ -0.85
RTN3P1-201ENST00000536295 LRP1BQ9NZR2 4599 aa9.76□□□□□ -0.85
RTN3P1-201ENST00000536295 TAAR5O14804 337 aa9.75□□□□□ -0.85
RTN3P1-201ENST00000536295 IGLV2-11P01706 119 aa9.75□□□□□ -0.85
RTN3P1-201ENST00000536295 BTF3P20290 206 aaKnown RBP9.75□□□□□ -0.85
RTN3P1-201ENST00000536295 KRTAP10-2P60368 255 aa9.75□□□□□ -0.85
RTN3P1-201ENST00000536295 ZFP69Q49AA0 526 aa9.75□□□□□ -0.85
RTN3P1-201ENST00000536295 WFDC10BQ8IUB3 73 aa9.75□□□□□ -0.85
RTN3P1-201ENST00000536295 CYB561D1Q8N8Q1 229 aa9.75□□□□□ -0.85
RTN3P1-201ENST00000536295 TMEM75Q8N9X5 138 aa9.75□□□□□ -0.85
RTN3P1-201ENST00000536295 PFN1P07737 140 aaKnown RBP9.74□□□□□ -0.85
RTN3P1-201ENST00000536295 UBE2G2P60604 165 aa9.74□□□□□ -0.85
RTN3P1-201ENST00000536295 ZNF726P1Q15940 193 aa9.74□□□□□ -0.85
RTN3P1-201ENST00000536295 SMUG1Q53HV7 270 aa9.74□□□□□ -0.85
RTN3P1-201ENST00000536295 Q6ZRN7 208 aaPredicted RBP9.74□□□□□ -0.85
RTN3P1-201ENST00000536295 NHLRC2Q8NBF2 726 aa9.74□□□□□ -0.85
RTN3P1-201ENST00000536295 TXNDC17Q9BRA2 123 aa9.74□□□□□ -0.85
RTN3P1-201ENST00000536295 LY96Q9Y6Y9 160 aa9.74□□□□□ -0.85
RTN3P1-201ENST00000536295 IGHV3-73A0A0B4J1V6 119 aa9.73□□□□□ -0.85
RTN3P1-201ENST00000536295 TRAV34A0A0B4J273 112 aa9.73□□□□□ -0.85
RTN3P1-201ENST00000536295 CTXND1A0A1B0GTU2 59 aa9.73□□□□□ -0.85
RTN3P1-201ENST00000536295 FBLL1A6NHQ2 334 aaKnown RBP9.73□□□□□ -0.85
RTN3P1-201ENST00000536295 IFNA7P01567 189 aa9.73□□□□□ -0.85
RTN3P1-201ENST00000536295 FGF8P55075 233 aaPredicted RBP9.73□□□□□ -0.85
RTN3P1-201ENST00000536295 RGS21Q2M5E4 152 aa9.73□□□□□ -0.85
RTN3P1-201ENST00000536295 ZNF876PQ49A33 203 aa9.73□□□□□ -0.85
RTN3P1-201ENST00000536295 LINC00479Q96M42 142 aa9.73□□□□□ -0.85
RTN3P1-201ENST00000536295 HSPG2P98160 4391 aa9.73□□□□□ -0.85
RTN3P1-201ENST00000536295 TRAV9-2A0A087WT02 112 aa9.72□□□□□ -0.85
RTN3P1-201ENST00000536295 A0A1W2PRE2 83 aa9.72□□□□□ -0.85
RTN3P1-201ENST00000536295 ARPC5O15511 151 aa9.72□□□□□ -0.85
RTN3P1-201ENST00000536295 CDK2AP2O75956 126 aa9.72□□□□□ -0.85
RTN3P1-201ENST00000536295 GATA1P15976 413 aaPredicted RBP9.72□□□□□ -0.85
RTN3P1-201ENST00000536295 SAPCD1Q5SSQ6 148 aa9.72□□□□□ -0.85
RTN3P1-201ENST00000536295 AKR1C8PQ5T2L2 129 aa9.72□□□□□ -0.85
RTN3P1-201ENST00000536295 DPPA3Q6W0C5 159 aa9.72□□□□□ -0.85
RTN3P1-201ENST00000536295 KRTAP4-5Q9BYR2 181 aa9.72□□□□□ -0.85
RTN3P1-201ENST00000536295 G3V3Q6 166 aa9.71□□□□□ -0.86
RTN3P1-201ENST00000536295 FUSP35637 526 aaKnown RBP eCLIP9.71□□□□□ -0.86
RTN3P1-201ENST00000536295 PPT1P50897 306 aa9.71□□□□□ -0.86
RTN3P1-201ENST00000536295 CFAP126Q5VTH2 177 aa9.71□□□□□ -0.86
RTN3P1-201ENST00000536295 MAPKAPK5-AS1Q8N8E1 139 aa9.71□□□□□ -0.86
RTN3P1-201ENST00000536295 C9orf85Q96MD7 179 aa9.71□□□□□ -0.86
RTN3P1-201ENST00000536295 ARL2-SNX15V9GYD0 113 aa9.71□□□□□ -0.86
RTN3P1-201ENST00000536295 PGPEP1LA6NFU8 196 aa9.7□□□□□ -0.86
RTN3P1-201ENST00000536295 SMLR1H3BR10 107 aa9.7□□□□□ -0.86
RTN3P1-201ENST00000536295 PEX7O00628 323 aa9.7□□□□□ -0.86
RTN3P1-201ENST00000536295 RS1O15537 224 aa9.7□□□□□ -0.86
RTN3P1-201ENST00000536295 EVI2AP22794 236 aa9.7□□□□□ -0.86
RTN3P1-201ENST00000536295 ZNF506Q5JVG8 444 aa9.7□□□□□ -0.86
RTN3P1-201ENST00000536295 NFE4Q86UQ8 179 aa9.7□□□□□ -0.86
RTN3P1-201ENST00000536295 SLC25A29Q8N8R3 303 aa9.7□□□□□ -0.86
RTN3P1-201ENST00000536295 DNAH5Q8TE73 4624 aa9.7□□□□□ -0.86
RTN3P1-201ENST00000536295 EREGO14944 169 aa9.69□□□□□ -0.86
RTN3P1-201ENST00000536295 RNASE3P12724 160 aaKnown RBP9.69□□□□□ -0.86
RTN3P1-201ENST00000536295 S100A4P26447 101 aaKnown RBP9.69□□□□□ -0.86
RTN3P1-201ENST00000536295 ERVFC1-1P60608 527 aa9.69□□□□□ -0.86
RTN3P1-201ENST00000536295 SH2D6Q7Z4S9 175 aa9.69□□□□□ -0.86
RTN3P1-201ENST00000536295 PRADC1Q9BSG0 188 aa9.69□□□□□ -0.86
RTN3P1-201ENST00000536295 CYTL1Q9NRR1 136 aa9.69□□□□□ -0.86
RTN3P1-201ENST00000536295 MSRB1Q9NZV6 116 aa9.69□□□□□ -0.86
RTN3P1-201ENST00000536295 APOBP04114 4563 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms