RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 CD3EP07766 207 aa14.87□□□□□ -0.03
SMPD1-210ENST00000534405 GRNP28799 593 aaKnown RBP14.87□□□□□ -0.03
SMPD1-210ENST00000534405 ATP5J2P56134 94 aa14.87□□□□□ -0.03
SMPD1-210ENST00000534405 ABCA4P78363 2273 aa14.87□□□□□ -0.03
SMPD1-210ENST00000534405 TMSB15BA0A087X1C1 80 aa14.86□□□□□ -0.03
SMPD1-210ENST00000534405 PLNP26678 52 aa14.86□□□□□ -0.03
SMPD1-210ENST00000534405 ASCL2Q99929 193 aa14.86□□□□□ -0.03
SMPD1-210ENST00000534405 DCHS2Q6V1P9 2916 aa14.85□□□□□ -0.03
SMPD1-210ENST00000534405 NRGNQ92686 78 aa14.85□□□□□ -0.03
SMPD1-210ENST00000534405 FOXC1Q12948 553 aa14.85□□□□□ -0.03
SMPD1-210ENST00000534405 SFTA2Q6UW10 78 aa14.85□□□□□ -0.03
SMPD1-210ENST00000534405 RNF185Q96GF1 192 aa14.85□□□□□ -0.03
SMPD1-210ENST00000534405 SCGB2A1O75556 95 aa14.84□□□□□ -0.03
SMPD1-210ENST00000534405 LGALS1P09382 135 aaKnown RBP14.84□□□□□ -0.03
SMPD1-210ENST00000534405 C5orf47Q569G3 176 aa14.84□□□□□ -0.03
SMPD1-210ENST00000534405 OR10J6PQ8NGY7 276 aa14.84□□□□□ -0.03
SMPD1-210ENST00000534405 VKORC1Q9BQB6 163 aa14.84□□□□□ -0.03
SMPD1-210ENST00000534405 ARHGAP32A7KAX9 2087 aa14.84□□□□□ -0.03
SMPD1-210ENST00000534405 TRAV8-2A0A0B4J237 113 aa14.84□□□□□ -0.03
SMPD1-210ENST00000534405 H3BVH4 76 aa14.84□□□□□ -0.03
SMPD1-210ENST00000534405 IGFBPL1Q8WX77 278 aa14.84□□□□□ -0.03
SMPD1-210ENST00000534405 LRBAP50851 2863 aa14.84□□□□□ -0.03
SMPD1-210ENST00000534405 SCGB1C2P0DMR2 95 aa14.83□□□□□ -0.04
SMPD1-210ENST00000534405 OR11H6Q8NGC7 330 aa14.83□□□□□ -0.04
SMPD1-210ENST00000534405 CSDC2Q9Y534 153 aaKnown RBP14.83□□□□□ -0.04
SMPD1-210ENST00000534405 K7ENP7 123 aa14.83□□□□□ -0.04
SMPD1-210ENST00000534405 ANKHD1Q8IWZ3 2542 aaKnown RBP14.82□□□□□ -0.04
SMPD1-210ENST00000534405 TNFRSF6BO95407 300 aa14.82□□□□□ -0.04
SMPD1-210ENST00000534405 HIGD1AQ9Y241 93 aa14.82□□□□□ -0.04
SMPD1-210ENST00000534405 LY6HO94772 140 aa14.82□□□□□ -0.04
SMPD1-210ENST00000534405 CD7P09564 240 aa14.82□□□□□ -0.04
SMPD1-210ENST00000534405 LY6LH3BQJ8 138 aa14.81□□□□□ -0.04
SMPD1-210ENST00000534405 I3L2K1 104 aa14.81□□□□□ -0.04
SMPD1-210ENST00000534405 NDUFA3O95167 84 aa14.81□□□□□ -0.04
SMPD1-210ENST00000534405 LYZP61626 148 aa14.81□□□□□ -0.04
SMPD1-210ENST00000534405 Q6ZQT7 251 aa14.81□□□□□ -0.04
SMPD1-210ENST00000534405 Q8N8P6 123 aa14.81□□□□□ -0.04
SMPD1-210ENST00000534405 MYOZ3Q8TDC0 251 aa14.81□□□□□ -0.04
SMPD1-210ENST00000534405 C8orf49Q96NF6 230 aa14.81□□□□□ -0.04
SMPD1-210ENST00000534405 SCNM1Q9BWG6 230 aa14.81□□□□□ -0.04
SMPD1-210ENST00000534405 SPTA1P02549 2419 aa14.81□□□□□ -0.04
SMPD1-210ENST00000534405 ZNF672Q499Z4 452 aaPredicted RBP14.81□□□□□ -0.04
SMPD1-210ENST00000534405 IGLV2-18A0A075B6J9 118 aa14.8□□□□□ -0.04
SMPD1-210ENST00000534405 GAS8-AS1O95177 125 aa14.8□□□□□ -0.04
SMPD1-210ENST00000534405 TMEM78Q5T7P6 136 aa14.8□□□□□ -0.04
SMPD1-210ENST00000534405 CSMD1Q96PZ7 3565 aa14.8□□□□□ -0.04
SMPD1-210ENST00000534405 SH2D1AO60880 128 aa14.8□□□□□ -0.04
SMPD1-210ENST00000534405 ONECUT1Q9UBC0 465 aa14.8□□□□□ -0.04
SMPD1-210ENST00000534405 TRBV19A0A075B6N1 114 aa14.79□□□□□ -0.04
SMPD1-210ENST00000534405 TIMM23O14925 209 aa14.79□□□□□ -0.04
SMPD1-210ENST00000534405 SLC25A20O43772 301 aa14.79□□□□□ -0.04
SMPD1-210ENST00000534405 CDSNQ15517 529 aa14.79□□□□□ -0.04
SMPD1-210ENST00000534405 NDUFA11Q86Y39 141 aa14.79□□□□□ -0.04
SMPD1-210ENST00000534405 LINC01587Q99440 93 aa14.79□□□□□ -0.04
SMPD1-210ENST00000534405 IGKV1-17P01599 117 aa14.78□□□□□ -0.04
SMPD1-210ENST00000534405 PLGLAQ15195 96 aa14.78□□□□□ -0.04
SMPD1-210ENST00000534405 ODF3Q96PU9 254 aa14.78□□□□□ -0.04
SMPD1-210ENST00000534405 PRB4P10163 310 aaPredicted RBP14.78□□□□□ -0.04
SMPD1-210ENST00000534405 SIGLEC15Q6ZMC9 328 aa14.78□□□□□ -0.04
SMPD1-210ENST00000534405 LYPD1Q8N2G4 141 aa14.78□□□□□ -0.04
SMPD1-210ENST00000534405 AAMDCQ9H7C9 122 aa14.78□□□□□ -0.04
SMPD1-210ENST00000534405 NBASA2RRP1 2371 aa14.78□□□□□ -0.04
SMPD1-210ENST00000534405 TRAV12-1A0A0B4J245 112 aa14.77□□□□□ -0.04
SMPD1-210ENST00000534405 F8VRH5 84 aa14.77□□□□□ -0.04
SMPD1-210ENST00000534405 IGLC6P0CF74 106 aa14.77□□□□□ -0.04
SMPD1-210ENST00000534405 DNAJC30Q96LL9 226 aa14.77□□□□□ -0.04
SMPD1-210ENST00000534405 H7C1H1 209 aa14.77□□□□□ -0.05
SMPD1-210ENST00000534405 K7EIM0 57 aa14.76□□□□□ -0.05
SMPD1-210ENST00000534405 C15orf53Q8NAA6 179 aa14.76□□□□□ -0.05
SMPD1-210ENST00000534405 COX8CQ7Z4L0 72 aa14.75□□□□□ -0.05
SMPD1-210ENST00000534405 LY6G5BQ8NDX9 201 aa14.75□□□□□ -0.05
SMPD1-210ENST00000534405 C17orf77Q96MU5 243 aa14.75□□□□□ -0.05
SMPD1-210ENST00000534405 RAXQ9Y2V3 346 aa14.75□□□□□ -0.05
SMPD1-210ENST00000534405 SRSF9Q13242 221 aaKnown RBP eCLIP14.75□□□□□ -0.05
SMPD1-210ENST00000534405 LY6DQ14210 128 aa14.75□□□□□ -0.05
SMPD1-210ENST00000534405 CNFNQ9BYD5 112 aa14.75□□□□□ -0.05
SMPD1-210ENST00000534405 LAGE3Q14657 143 aa14.74□□□□□ -0.05
SMPD1-210ENST00000534405 Q8N1Y9 231 aa14.74□□□□□ -0.05
SMPD1-210ENST00000534405 RNF5Q99942 180 aa14.74□□□□□ -0.05
SMPD1-210ENST00000534405 S4R3C0 116 aa14.74□□□□□ -0.05
SMPD1-210ENST00000534405 CFHR4Q92496 578 aa14.73□□□□□ -0.05
SMPD1-210ENST00000534405 MSRB1Q9NZV6 116 aa14.73□□□□□ -0.05
SMPD1-210ENST00000534405 EGR2P11161 476 aaPredicted RBP14.73□□□□□ -0.05
SMPD1-210ENST00000534405 MRPL23Q16540 153 aaKnown RBP14.73□□□□□ -0.05
SMPD1-210ENST00000534405 FBXL19-AS1Q494R0 122 aa14.73□□□□□ -0.05
SMPD1-210ENST00000534405 C10orf126Q8N4M7 172 aa14.73□□□□□ -0.05
SMPD1-210ENST00000534405 LINC01600Q96MT4 127 aa14.73□□□□□ -0.05
SMPD1-210ENST00000534405 TRAV8-4A0A0B4J246 113 aa14.72□□□□□ -0.05
SMPD1-210ENST00000534405 ZNF815PA8K554 130 aa14.72□□□□□ -0.05
SMPD1-210ENST00000534405 C9JAW5 83 aa14.72□□□□□ -0.05
SMPD1-210ENST00000534405 WIPF1O43516 503 aa14.72□□□□□ -0.05
SMPD1-210ENST00000534405 TGFAP01135 160 aa14.72□□□□□ -0.05
SMPD1-210ENST00000534405 GATA1P15976 413 aaPredicted RBP14.72□□□□□ -0.05
SMPD1-210ENST00000534405 PLEKHB2Q96CS7 222 aa14.72□□□□□ -0.05
SMPD1-210ENST00000534405 CCL21O00585 134 aa14.72□□□□□ -0.05
SMPD1-210ENST00000534405 SCGB1D4Q6XE38 83 aa14.72□□□□□ -0.05
SMPD1-210ENST00000534405 HRNRQ86YZ3 2850 aaPredicted RBP14.72□□□□□ -0.05
SMPD1-210ENST00000534405 NBR2O15453 112 aa14.71□□□□□ -0.05
SMPD1-210ENST00000534405 RPL13AP40429 203 aaKnown RBP14.71□□□□□ -0.05
SMPD1-210ENST00000534405 ZNF575Q86XF7 245 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms