RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 TMEM70Q9BUB7 260 aa12.04□□□□□ -0.48
UBXN1-216ENST00000533908 OTORQ9NRC9 128 aa12.04□□□□□ -0.48
UBXN1-216ENST00000533908 RPH3ALQ9UNE2 315 aa12.04□□□□□ -0.48
UBXN1-216ENST00000533908 DNAH8Q96JB1 4490 aa12.03□□□□□ -0.48
UBXN1-216ENST00000533908 TRAV8-1A0A0A6YYK1 113 aa12.03□□□□□ -0.48
UBXN1-216ENST00000533908 F6UZH7 168 aa12.03□□□□□ -0.48
UBXN1-216ENST00000533908 ASAH1Q13510 395 aa12.03□□□□□ -0.48
UBXN1-216ENST00000533908 Q8N814 137 aa12.03□□□□□ -0.48
UBXN1-216ENST00000533908 SLC25A29Q8N8R3 303 aa12.03□□□□□ -0.48
UBXN1-216ENST00000533908 ATP5SQ99766 215 aa12.03□□□□□ -0.48
UBXN1-216ENST00000533908 MBD2Q9UBB5 411 aa12.03□□□□□ -0.48
UBXN1-216ENST00000533908 PSCAO43653 123 aa12.02□□□□□ -0.49
UBXN1-216ENST00000533908 H2BFSP57053 126 aa12.02□□□□□ -0.49
UBXN1-216ENST00000533908 KHDC3LQ587J8 217 aa12.02□□□□□ -0.49
UBXN1-216ENST00000533908 MZT2BQ6NZ67 158 aa12.02□□□□□ -0.49
UBXN1-216ENST00000533908 DPPA3Q6W0C5 159 aa12.02□□□□□ -0.49
UBXN1-216ENST00000533908 GOLT1AQ6ZVE7 132 aa12.02□□□□□ -0.49
UBXN1-216ENST00000533908 SH2D6Q7Z4S9 175 aa12.02□□□□□ -0.49
UBXN1-216ENST00000533908 NTN5Q8WTR8 489 aaPredicted RBP12.02□□□□□ -0.49
UBXN1-216ENST00000533908 Q9HAA7 133 aa12.02□□□□□ -0.49
UBXN1-216ENST00000533908 C11orf21Q9P2W6 132 aa12.02□□□□□ -0.49
UBXN1-216ENST00000533908 TRAV21A0A0B4J279 112 aa12.01□□□□□ -0.49
UBXN1-216ENST00000533908 PPT1P50897 306 aa12.01□□□□□ -0.49
UBXN1-216ENST00000533908 GNG5P63218 68 aa12.01□□□□□ -0.49
UBXN1-216ENST00000533908 Q6ZSN1 163 aa12.01□□□□□ -0.49
UBXN1-216ENST00000533908 SMIM3Q9BZL3 60 aa12.01□□□□□ -0.49
UBXN1-216ENST00000533908 WFDC1Q9HC57 220 aa12.01□□□□□ -0.49
UBXN1-216ENST00000533908 TREM1Q9NP99 234 aa12.01□□□□□ -0.49
UBXN1-216ENST00000533908 HSPB11Q9Y547 144 aa12.01□□□□□ -0.49
UBXN1-216ENST00000533908 IGHV3-30P01768 117 aa12□□□□□ -0.49
UBXN1-216ENST00000533908 IGHV3-33P01772 117 aa12□□□□□ -0.49
UBXN1-216ENST00000533908 IGHV3-30-3P0DP02 117 aa12□□□□□ -0.49
UBXN1-216ENST00000533908 IGHV3-30-5P0DP03 117 aa12□□□□□ -0.49
UBXN1-216ENST00000533908 ZNF80P51504 273 aaPredicted RBP12□□□□□ -0.49
UBXN1-216ENST00000533908 WFDC2Q14508 124 aa12□□□□□ -0.49
UBXN1-216ENST00000533908 CFAP126Q5VTH2 177 aa12□□□□□ -0.49
UBXN1-216ENST00000533908 PPP1R1CQ8WVI7 109 aa12□□□□□ -0.49
UBXN1-216ENST00000533908 SGK494Q96LW2 274 aa12□□□□□ -0.49
UBXN1-216ENST00000533908 IGHV3-73A0A0B4J1V6 119 aa11.99□□□□□ -0.49
UBXN1-216ENST00000533908 RS1O15537 224 aa11.99□□□□□ -0.49
UBXN1-216ENST00000533908 PFN1P07737 140 aaKnown RBP11.99□□□□□ -0.49
UBXN1-216ENST00000533908 TAS2R45P59539 299 aa11.99□□□□□ -0.49
UBXN1-216ENST00000533908 ZNF876PQ49A33 203 aa11.99□□□□□ -0.49
UBXN1-216ENST00000533908 OR10J3Q5JRS4 329 aa11.99□□□□□ -0.49
UBXN1-216ENST00000533908 Q8N3U1 123 aa11.99□□□□□ -0.49
UBXN1-216ENST00000533908 CMTM2Q8TAZ6 248 aa11.99□□□□□ -0.49
UBXN1-216ENST00000533908 SDF2L1Q9HCN8 221 aa11.99□□□□□ -0.49
UBXN1-216ENST00000533908 TRAV8-6A0A0B4J262 113 aa11.98□□□□□ -0.49
UBXN1-216ENST00000533908 FBLL1A6NHQ2 334 aaKnown RBP11.98□□□□□ -0.49
UBXN1-216ENST00000533908 CYCSP99999 105 aaKnown RBP11.98□□□□□ -0.49
UBXN1-216ENST00000533908 IFITM3Q01628 133 aa11.98□□□□□ -0.49
UBXN1-216ENST00000533908 SCGB1C1Q8TD33 95 aa11.98□□□□□ -0.49
UBXN1-216ENST00000533908 ASB13Q8WXK3 278 aa11.98□□□□□ -0.49
UBXN1-216ENST00000533908 TRBV6-4A0A1B0GX49 114 aa11.97□□□□□ -0.49
UBXN1-216ENST00000533908 HMGB3O15347 200 aaKnown RBP11.97□□□□□ -0.49
UBXN1-216ENST00000533908 MPC2O95563 127 aa11.97□□□□□ -0.49
UBXN1-216ENST00000533908 ARL6IP6Q8N6S5 226 aa11.97□□□□□ -0.49
UBXN1-216ENST00000533908 KCNS1Q96KK3 526 aa11.97□□□□□ -0.49
UBXN1-216ENST00000533908 NDUFA13Q9P0J0 144 aa11.97□□□□□ -0.49
UBXN1-216ENST00000533908 PGPEP1LA6NFU8 196 aa11.96□□□□□ -0.49
UBXN1-216ENST00000533908 RPL12P30050 165 aaKnown RBP11.96□□□□□ -0.49
UBXN1-216ENST00000533908 RAB2AP61019 212 aa11.96□□□□□ -0.49
UBXN1-216ENST00000533908 FAM74A1Q5RGS3 127 aa11.96□□□□□ -0.49
UBXN1-216ENST00000533908 LELP1Q5T871 98 aa11.96□□□□□ -0.49
UBXN1-216ENST00000533908 TMEM75Q8N9X5 138 aa11.96□□□□□ -0.49
UBXN1-216ENST00000533908 ENKURQ8TC29 256 aa11.96□□□□□ -0.49
UBXN1-216ENST00000533908 INMT-MINDY4F8WBC2 141 aa11.95□□□□□ -0.5
UBXN1-216ENST00000533908 PQLC2Q6ZP29 291 aa11.95□□□□□ -0.5
UBXN1-216ENST00000533908 C9orf85Q96MD7 179 aa11.95□□□□□ -0.5
UBXN1-216ENST00000533908 PRADC1Q9BSG0 188 aa11.95□□□□□ -0.5
UBXN1-216ENST00000533908 Q9UF83 564 aa11.95□□□□□ -0.5
UBXN1-216ENST00000533908 C1QBP02746 253 aa11.94□□□□□ -0.5
UBXN1-216ENST00000533908 RHOHQ15669 191 aa11.94□□□□□ -0.5
UBXN1-216ENST00000533908 Q6ZSA8 131 aa11.94□□□□□ -0.5
UBXN1-216ENST00000533908 LINC00299Q6ZSB3 139 aa11.94□□□□□ -0.5
UBXN1-216ENST00000533908 ATP6V0E2Q8NHE4 81 aa11.94□□□□□ -0.5
UBXN1-216ENST00000533908 GTSF1LQ9H1H1 148 aa11.94□□□□□ -0.5
UBXN1-216ENST00000533908 A0A1W2PPV4 95 aa11.93□□□□□ -0.5
UBXN1-216ENST00000533908 J3QL48 77 aa11.93□□□□□ -0.5
UBXN1-216ENST00000533908 UPK1BO75841 260 aa11.93□□□□□ -0.5
UBXN1-216ENST00000533908 IGLV2-11P01706 119 aa11.93□□□□□ -0.5
UBXN1-216ENST00000533908 RNASE3P12724 160 aaKnown RBP11.93□□□□□ -0.5
UBXN1-216ENST00000533908 ACOT6Q3I5F7 207 aaPredicted RBP11.93□□□□□ -0.5
UBXN1-216ENST00000533908 ZNF506Q5JVG8 444 aa11.93□□□□□ -0.5
UBXN1-216ENST00000533908 LECT2O14960 151 aa11.92□□□□□ -0.5
UBXN1-216ENST00000533908 CIDEAO60543 219 aa11.92□□□□□ -0.5
UBXN1-216ENST00000533908 TCRAP04437 139 aa11.92□□□□□ -0.5
UBXN1-216ENST00000533908 OR10G9Q8NGN4 311 aa11.92□□□□□ -0.5
UBXN1-216ENST00000533908 OR10G7Q8NGN6 311 aa11.92□□□□□ -0.5
UBXN1-216ENST00000533908 MARVELD1Q9BSK0 173 aa11.92□□□□□ -0.5
UBXN1-216ENST00000533908 TAAR5O14804 337 aa11.91□□□□□ -0.5
UBXN1-216ENST00000533908 GCGP01275 180 aa11.91□□□□□ -0.5
UBXN1-216ENST00000533908 ARL14EPLP0DKL9 152 aa11.91□□□□□ -0.5
UBXN1-216ENST00000533908 LAGE3Q14657 143 aa11.91□□□□□ -0.5
UBXN1-216ENST00000533908 DAZ4Q86SG3 579 aaKnown RBP11.91□□□□□ -0.5
UBXN1-216ENST00000533908 S100ZQ8WXG8 99 aa11.91□□□□□ -0.5
UBXN1-216ENST00000533908 PTH2Q96A98 100 aa11.91□□□□□ -0.5
UBXN1-216ENST00000533908 DAZ3Q9NR90 486 aaKnown RBP11.91□□□□□ -0.5
UBXN1-216ENST00000533908 PSG8Q9UQ74 426 aa11.91□□□□□ -0.5
UBXN1-216ENST00000533908 BOLA1Q9Y3E2 137 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms