RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 RANP62826 216 aaKnown RBP5.51□□□□□ -1.53
CASP4-212ENST00000533730 BAP18Q8IXM2 172 aa5.51□□□□□ -1.53
CASP4-212ENST00000533730 TMEM256Q8N2U0 113 aa5.51□□□□□ -1.53
CASP4-212ENST00000533730 EXOC3-AS1Q8N2X6 119 aa5.51□□□□□ -1.53
CASP4-212ENST00000533730 STOML3Q8TAV4 291 aa5.51□□□□□ -1.53
CASP4-212ENST00000533730 MUC7Q8TAX7 377 aa5.51□□□□□ -1.53
CASP4-212ENST00000533730 PHYHIPLQ96FC7 376 aa5.51□□□□□ -1.53
CASP4-212ENST00000533730 LINC00477Q96M19 166 aa5.51□□□□□ -1.53
CASP4-212ENST00000533730 C20orf144Q9BQM9 153 aa5.51□□□□□ -1.53
CASP4-212ENST00000533730 SLC35B3Q9H1N7 401 aa5.51□□□□□ -1.53
CASP4-212ENST00000533730 Q9H3A6 140 aa5.51□□□□□ -1.53
CASP4-212ENST00000533730 OTORQ9NRC9 128 aa5.51□□□□□ -1.53
CASP4-212ENST00000533730 TRBV7-9A0A0J9YWB2 115 aa5.5□□□□□ -1.53
CASP4-212ENST00000533730 A0A0J9YWU9 116 aa5.5□□□□□ -1.53
CASP4-212ENST00000533730 TMEM189A5PLL7 270 aa5.5□□□□□ -1.53
CASP4-212ENST00000533730 RBAKDNA6NC62 111 aa5.5□□□□□ -1.53
CASP4-212ENST00000533730 PCP4L1A6NKN8 68 aa5.5□□□□□ -1.53
CASP4-212ENST00000533730 M0R3E3 92 aa5.5□□□□□ -1.53
CASP4-212ENST00000533730 SLC25A5P05141 298 aaKnown RBP5.5□□□□□ -1.53
CASP4-212ENST00000533730 NMBP08949 121 aa5.5□□□□□ -1.53
CASP4-212ENST00000533730 ZNF705DP0CH99 300 aaPredicted RBP5.5□□□□□ -1.53
CASP4-212ENST00000533730 ZNF705BP0CI00 300 aaPredicted RBP5.5□□□□□ -1.53
CASP4-212ENST00000533730 CDKN1BP46527 198 aa5.5□□□□□ -1.53
CASP4-212ENST00000533730 FXYD7P58549 80 aa5.5□□□□□ -1.53
CASP4-212ENST00000533730 SPINK13Q1W4C9 94 aa5.5□□□□□ -1.53
CASP4-212ENST00000533730 ZFP69Q49AA0 526 aa5.5□□□□□ -1.53
CASP4-212ENST00000533730 TMEM78Q5T7P6 136 aa5.5□□□□□ -1.53
CASP4-212ENST00000533730 DPPA3Q6W0C5 159 aa5.5□□□□□ -1.53
CASP4-212ENST00000533730 ZNF705AQ6ZN79 300 aaPredicted RBP5.5□□□□□ -1.53
CASP4-212ENST00000533730 C9orf47Q6ZRZ4 202 aa5.5□□□□□ -1.53
CASP4-212ENST00000533730 STPG4Q8N801 248 aa5.5□□□□□ -1.53
CASP4-212ENST00000533730 OR10G8Q8NGN5 311 aa5.5□□□□□ -1.53
CASP4-212ENST00000533730 CMTM2Q8TAZ6 248 aa5.5□□□□□ -1.53
CASP4-212ENST00000533730 SUN5Q8TC36 379 aa5.5□□□□□ -1.53
CASP4-212ENST00000533730 ZNF479Q96JC4 524 aa5.5□□□□□ -1.53
CASP4-212ENST00000533730 TMEM208Q9BTX3 173 aa5.5□□□□□ -1.53
CASP4-212ENST00000533730 AGRNO00468 2067 aa5.5□□□□□ -1.53
CASP4-212ENST00000533730 PRKDCP78527 4128 aaKnown RBP5.5□□□□□ -1.53
CASP4-212ENST00000533730 TEX48A0A1B0GUV7 120 aa5.49□□□□□ -1.53
CASP4-212ENST00000533730 MAP1LC3B2A6NCE7 125 aa5.49□□□□□ -1.53
CASP4-212ENST00000533730 FAM74A7A6NL05 159 aa5.49□□□□□ -1.53
CASP4-212ENST00000533730 M0R2Z0 102 aa5.49□□□□□ -1.53
CASP4-212ENST00000533730 HMGB3O15347 200 aaKnown RBP5.49□□□□□ -1.53
CASP4-212ENST00000533730 HBE1P02100 147 aa5.49□□□□□ -1.53
CASP4-212ENST00000533730 RAB5CP51148 216 aa5.49□□□□□ -1.53
CASP4-212ENST00000533730 KIAA1644Q3SXP7 199 aa5.49□□□□□ -1.53
CASP4-212ENST00000533730 LGALSLQ3ZCW2 172 aaPredicted RBP5.49□□□□□ -1.53
CASP4-212ENST00000533730 FAM74A3Q4VXF1 159 aa5.49□□□□□ -1.53
CASP4-212ENST00000533730 SLC51BQ86UW2 128 aa5.49□□□□□ -1.53
CASP4-212ENST00000533730 IQCF2Q8IXL9 164 aa5.49□□□□□ -1.53
CASP4-212ENST00000533730 Q8NAQ8 132 aa5.49□□□□□ -1.53
CASP4-212ENST00000533730 NKX6-2Q9C056 277 aaPredicted RBP5.49□□□□□ -1.53
CASP4-212ENST00000533730 MAP1LC3BQ9GZQ8 125 aa5.49□□□□□ -1.53
CASP4-212ENST00000533730 RPH3ALQ9UNE2 315 aa5.49□□□□□ -1.53
CASP4-212ENST00000533730 LENEPQ9Y5L5 61 aa5.49□□□□□ -1.53
CASP4-212ENST00000533730 IGHV3OR16-12A0A075B7B8 117 aa5.48□□□□□ -1.53
CASP4-212ENST00000533730 A0A1W2PRE2 83 aa5.48□□□□□ -1.53
CASP4-212ENST00000533730 PGPA6NDG6 321 aa5.48□□□□□ -1.53
CASP4-212ENST00000533730 H7BYZ3 331 aa5.48□□□□□ -1.53
CASP4-212ENST00000533730 CRXO43186 299 aaPredicted RBP5.48□□□□□ -1.53
CASP4-212ENST00000533730 CT45A10P0DMU9 189 aa5.48□□□□□ -1.53
CASP4-212ENST00000533730 CRISP2P16562 243 aa5.48□□□□□ -1.53
CASP4-212ENST00000533730 ZNF138P52744 262 aa5.48□□□□□ -1.53
CASP4-212ENST00000533730 ZNF726P1Q15940 193 aa5.48□□□□□ -1.53
CASP4-212ENST00000533730 RRN3P1Q2M238 152 aa5.48□□□□□ -1.53
CASP4-212ENST00000533730 C1orf158Q8N1D5 194 aa5.48□□□□□ -1.53
CASP4-212ENST00000533730 C5orf17Q8NAS9 161 aa5.48□□□□□ -1.53
CASP4-212ENST00000533730 AGPAT4-IT1Q9H0P7 198 aa5.48□□□□□ -1.53
CASP4-212ENST00000533730 ARL2-SNX15V9GYD0 113 aa5.48□□□□□ -1.53
CASP4-212ENST00000533730 COL7A1Q02388 2944 aa5.47□□□□□ -1.53
CASP4-212ENST00000533730 TRAV12-2A0A075B6T6 113 aa5.47□□□□□ -1.53
CASP4-212ENST00000533730 IGKV2-40A0A087WW87 121 aaPredicted RBP5.47□□□□□ -1.53
CASP4-212ENST00000533730 A0A1B0GVG6 124 aa5.47□□□□□ -1.53
CASP4-212ENST00000533730 TEX46H3BTG2 121 aa5.47□□□□□ -1.53
CASP4-212ENST00000533730 EIF3GO75821 320 aaKnown RBP eCLIP5.47□□□□□ -1.53
CASP4-212ENST00000533730 IGKV2D-40P01614 121 aaPredicted RBP5.47□□□□□ -1.53
CASP4-212ENST00000533730 TAS2R60P59551 318 aa5.47□□□□□ -1.53
CASP4-212ENST00000533730 ATRAIDQ6UW56 229 aa5.47□□□□□ -1.53
CASP4-212ENST00000533730 SSX7Q7RTT5 188 aa5.47□□□□□ -1.53
CASP4-212ENST00000533730 C9orf62Q8N4C0 152 aa5.47□□□□□ -1.53
CASP4-212ENST00000533730 C11orf45Q8TAV5 145 aa5.47□□□□□ -1.53
CASP4-212ENST00000533730 FAM213BQ8TBF2 198 aa5.47□□□□□ -1.53
CASP4-212ENST00000533730 MBD3L1Q8WWY6 194 aa5.47□□□□□ -1.53
CASP4-212ENST00000533730 LINC01587Q99440 93 aa5.47□□□□□ -1.53
CASP4-212ENST00000533730 TCEAL7Q9BRU2 100 aa5.47□□□□□ -1.53
CASP4-212ENST00000533730 NIPSNAP3BQ9BS92 247 aa5.47□□□□□ -1.53
CASP4-212ENST00000533730 ZNF492Q9P255 531 aa5.47□□□□□ -1.53
CASP4-212ENST00000533730 STAB2Q8WWQ8 2551 aa5.46□□□□□ -1.54
CASP4-212ENST00000533730 C7orf71A4D174 169 aa5.46□□□□□ -1.54
CASP4-212ENST00000533730 KLLNB2CW77 178 aa5.46□□□□□ -1.54
CASP4-212ENST00000533730 IFNA7P01567 189 aa5.46□□□□□ -1.54
CASP4-212ENST00000533730 GPX1P07203 203 aa5.46□□□□□ -1.54
CASP4-212ENST00000533730 RBMY1A1P0DJD3 496 aaKnown RBP5.46□□□□□ -1.54
CASP4-212ENST00000533730 RBMY1CP0DJD4 496 aa5.46□□□□□ -1.54
CASP4-212ENST00000533730 ERCC8Q13216 396 aa5.46□□□□□ -1.54
CASP4-212ENST00000533730 RBMY1FQ15415 496 aaKnown RBP5.46□□□□□ -1.54
CASP4-212ENST00000533730 GFI1BQ5VTD9 330 aa5.46□□□□□ -1.54
CASP4-212ENST00000533730 ZNF493Q6ZR52 646 aa5.46□□□□□ -1.54
CASP4-212ENST00000533730 GOLT1AQ6ZVE7 132 aa5.46□□□□□ -1.54
CASP4-212ENST00000533730 CYB561D1Q8N8Q1 229 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms