RNA–Protein interactions for RNA: ENST00000533632.5

TRAPPC4-214, Transcript of trafficking protein particle complex 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC4, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-214ENST00000533632 HIST1H2BBP33778 126 aa9.88□□□□□ -0.83
TRAPPC4-214ENST00000533632 HIST1H2BDP58876 126 aa9.88□□□□□ -0.83
TRAPPC4-214ENST00000533632 HIST1H2BCP62807 126 aa9.88□□□□□ -0.83
TRAPPC4-214ENST00000533632 HIST2H2BEQ16778 126 aa9.88□□□□□ -0.83
TRAPPC4-214ENST00000533632 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.88□□□□□ -0.83
TRAPPC4-214ENST00000533632 FOXI2Q6ZQN5 318 aa9.88□□□□□ -0.83
TRAPPC4-214ENST00000533632 GTSF1Q8WW33 167 aa9.88□□□□□ -0.83
TRAPPC4-214ENST00000533632 FRZBQ92765 325 aa9.88□□□□□ -0.83
TRAPPC4-214ENST00000533632 HIST1H2BHQ93079 126 aa9.88□□□□□ -0.83
TRAPPC4-214ENST00000533632 HIST1H2BNQ99877 126 aa9.88□□□□□ -0.83
TRAPPC4-214ENST00000533632 HIST1H2BMQ99879 126 aa9.88□□□□□ -0.83
TRAPPC4-214ENST00000533632 A0A1B0GW15 77 aa9.88□□□□□ -0.83
TRAPPC4-214ENST00000533632 RBMY1BA6NDE4 496 aaKnown RBP9.88□□□□□ -0.83
TRAPPC4-214ENST00000533632 RBMY1EA6NEQ0 496 aaKnown RBP9.88□□□□□ -0.83
TRAPPC4-214ENST00000533632 RBMY1DP0C7P1 496 aaKnown RBP9.88□□□□□ -0.83
TRAPPC4-214ENST00000533632 TRGC1P0CF51 173 aa9.88□□□□□ -0.83
TRAPPC4-214ENST00000533632 FABP9Q0Z7S8 132 aa9.88□□□□□ -0.83
TRAPPC4-214ENST00000533632 FAM19A4Q96LR4 140 aa9.88□□□□□ -0.83
TRAPPC4-214ENST00000533632 ODF3Q96PU9 254 aa9.88□□□□□ -0.83
TRAPPC4-214ENST00000533632 TGP01266 2768 aa9.87□□□□□ -0.83
TRAPPC4-214ENST00000533632 SNURFLB1AK76 121 aa9.87□□□□□ -0.83
TRAPPC4-214ENST00000533632 H3BMM0 161 aa9.87□□□□□ -0.83
TRAPPC4-214ENST00000533632 HLA-DRB4P13762 266 aa9.87□□□□□ -0.83
TRAPPC4-214ENST00000533632 CRISP2P16562 243 aa9.87□□□□□ -0.83
TRAPPC4-214ENST00000533632 ZNF80P51504 273 aaPredicted RBP9.87□□□□□ -0.83
TRAPPC4-214ENST00000533632 LINC01559Q495D7 138 aa9.87□□□□□ -0.83
TRAPPC4-214ENST00000533632 MRPL54Q6P161 138 aaKnown RBP9.87□□□□□ -0.83
TRAPPC4-214ENST00000533632 EBLN2Q6P2I7 272 aa9.87□□□□□ -0.83
TRAPPC4-214ENST00000533632 HLA-DRB4X5D2U9 266 aa9.87□□□□□ -0.83
TRAPPC4-214ENST00000533632 COL7A1Q02388 2944 aa9.87□□□□□ -0.83
TRAPPC4-214ENST00000533632 A0A1B0GXF2 115 aa9.86□□□□□ -0.83
TRAPPC4-214ENST00000533632 C5orf52A6NGY3 159 aa9.86□□□□□ -0.83
TRAPPC4-214ENST00000533632 DUSP14O95147 198 aaKnown RBP9.86□□□□□ -0.83
TRAPPC4-214ENST00000533632 IGKV3-20P01619 116 aa9.86□□□□□ -0.83
TRAPPC4-214ENST00000533632 S100A8P05109 93 aa9.86□□□□□ -0.83
TRAPPC4-214ENST00000533632 CMC4P56277 68 aaPredicted RBP9.86□□□□□ -0.83
TRAPPC4-214ENST00000533632 MRAPQ8TCY5 172 aa9.86□□□□□ -0.83
TRAPPC4-214ENST00000533632 BORCS7Q96B45 105 aa9.86□□□□□ -0.83
TRAPPC4-214ENST00000533632 A8MTW9 85 aa9.86□□□□□ -0.83
TRAPPC4-214ENST00000533632 SPINK4O60575 86 aa9.86□□□□□ -0.83
TRAPPC4-214ENST00000533632 HBBP68871 147 aa9.86□□□□□ -0.83
TRAPPC4-214ENST00000533632 AMTNQ6UX39 209 aa9.86□□□□□ -0.83
TRAPPC4-214ENST00000533632 TMEM136Q6ZRR5 245 aa9.86□□□□□ -0.83
TRAPPC4-214ENST00000533632 TRPT1Q86TN4 253 aaKnown RBP9.86□□□□□ -0.83
TRAPPC4-214ENST00000533632 PGLYRP4Q96LB8 373 aa9.86□□□□□ -0.83
TRAPPC4-214ENST00000533632 MRPL18Q9H0U6 180 aaKnown RBP9.86□□□□□ -0.83
TRAPPC4-214ENST00000533632 TRAV21A0A0B4J279 112 aa9.85□□□□□ -0.83
TRAPPC4-214ENST00000533632 A0A1B0GUT8 65 aa9.85□□□□□ -0.83
TRAPPC4-214ENST00000533632 ORM1P02763 201 aa9.85□□□□□ -0.83
TRAPPC4-214ENST00000533632 IGHV4-30-4P0DP06 118 aa9.85□□□□□ -0.83
TRAPPC4-214ENST00000533632 RIGQ13278 110 aa9.85□□□□□ -0.83
TRAPPC4-214ENST00000533632 ZFAND2AQ8N6M9 145 aa9.85□□□□□ -0.83
TRAPPC4-214ENST00000533632 HUWE1Q7Z6Z7 4374 aaKnown RBP9.85□□□□□ -0.83
TRAPPC4-214ENST00000533632 GPX1P07203 203 aa9.84□□□□□ -0.83
TRAPPC4-214ENST00000533632 RAB4BP61018 213 aa9.84□□□□□ -0.83
TRAPPC4-214ENST00000533632 SNRPEP62304 92 aaKnown RBP9.84□□□□□ -0.83
TRAPPC4-214ENST00000533632 F2Z2F3 143 aa9.83□□□□□ -0.84
TRAPPC4-214ENST00000533632 UBE2CO00762 179 aa9.83□□□□□ -0.84
TRAPPC4-214ENST00000533632 GZMBP10144 247 aa9.83□□□□□ -0.84
TRAPPC4-214ENST00000533632 RPL35AP18077 110 aaKnown RBP9.83□□□□□ -0.84
TRAPPC4-214ENST00000533632 LEPP41159 167 aa9.83□□□□□ -0.84
TRAPPC4-214ENST00000533632 KIR3DS1Q14943 382 aa9.83□□□□□ -0.84
TRAPPC4-214ENST00000533632 COA6Q5JTJ3 125 aaKnown RBP9.83□□□□□ -0.84
TRAPPC4-214ENST00000533632 STHQ8IWL8 128 aa9.83□□□□□ -0.84
TRAPPC4-214ENST00000533632 KLLNB2CW77 178 aa9.83□□□□□ -0.84
TRAPPC4-214ENST00000533632 APCSP02743 223 aa9.83□□□□□ -0.84
TRAPPC4-214ENST00000533632 IGLC6P0CF74 106 aa9.83□□□□□ -0.84
TRAPPC4-214ENST00000533632 TSPOP30536 169 aa9.83□□□□□ -0.84
TRAPPC4-214ENST00000533632 CTRLP40313 264 aa9.83□□□□□ -0.84
TRAPPC4-214ENST00000533632 NDUFA6P56556 154 aa9.83□□□□□ -0.84
TRAPPC4-214ENST00000533632 S100A12P80511 92 aa9.83□□□□□ -0.84
TRAPPC4-214ENST00000533632 FER1L6-AS1Q8NA97 138 aa9.83□□□□□ -0.84
TRAPPC4-214ENST00000533632 GIG44P09565 113 aaPredicted RBP9.82□□□□□ -0.84
TRAPPC4-214ENST00000533632 FRMD6-AS1P0C7T7 363 aa9.82□□□□□ -0.84
TRAPPC4-214ENST00000533632 HOXA5P20719 270 aa9.82□□□□□ -0.84
TRAPPC4-214ENST00000533632 FXYD7P58549 80 aa9.82□□□□□ -0.84
TRAPPC4-214ENST00000533632 GATD1Q8NB37 220 aa9.82□□□□□ -0.84
TRAPPC4-214ENST00000533632 TMSB15BA0A087X1C1 80 aa9.81□□□□□ -0.84
TRAPPC4-214ENST00000533632 M0R2Z0 102 aa9.81□□□□□ -0.84
TRAPPC4-214ENST00000533632 CAMPP49913 170 aa9.81□□□□□ -0.84
TRAPPC4-214ENST00000533632 DEFB121Q5J5C9 76 aa9.81□□□□□ -0.84
TRAPPC4-214ENST00000533632 PRR9Q5T870 116 aa9.81□□□□□ -0.84
TRAPPC4-214ENST00000533632 CLUHP3Q96NS8 147 aa9.81□□□□□ -0.84
TRAPPC4-214ENST00000533632 CNFNQ9BYD5 112 aa9.81□□□□□ -0.84
TRAPPC4-214ENST00000533632 IGKV3D-20A0A0C4DH25 116 aa9.8□□□□□ -0.84
TRAPPC4-214ENST00000533632 SPINK13Q1W4C9 94 aa9.8□□□□□ -0.84
TRAPPC4-214ENST00000533632 LYZL1Q6UWQ5 148 aa9.8□□□□□ -0.84
TRAPPC4-214ENST00000533632 TENM3Q9P273 2699 aa9.8□□□□□ -0.84
TRAPPC4-214ENST00000533632 A8MZ25 164 aa9.8□□□□□ -0.84
TRAPPC4-214ENST00000533632 ARMS2P0C7Q2 107 aa9.8□□□□□ -0.84
TRAPPC4-214ENST00000533632 RNASE4P34096 147 aaKnown RBP9.8□□□□□ -0.84
TRAPPC4-214ENST00000533632 Q6ZQT7 251 aa9.8□□□□□ -0.84
TRAPPC4-214ENST00000533632 ZNF575Q86XF7 245 aa9.8□□□□□ -0.84
TRAPPC4-214ENST00000533632 C11orf21Q9P2W6 132 aa9.8□□□□□ -0.84
TRAPPC4-214ENST00000533632 TRAV12-2A0A075B6T6 113 aa9.79□□□□□ -0.84
TRAPPC4-214ENST00000533632 J3KRW8 73 aa9.79□□□□□ -0.84
TRAPPC4-214ENST00000533632 CRXO43186 299 aaPredicted RBP9.79□□□□□ -0.84
TRAPPC4-214ENST00000533632 CDKN1BP46527 198 aa9.79□□□□□ -0.84
TRAPPC4-214ENST00000533632 Q0VG73 95 aa9.79□□□□□ -0.84
TRAPPC4-214ENST00000533632 ZNF493Q6ZR52 646 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms