RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 PFN1P07737 140 aaKnown RBP6.86□□□□□ -1.31
NUP98-220ENST00000533346 TPT1P13693 172 aaKnown RBP6.86□□□□□ -1.31
NUP98-220ENST00000533346 RAB5CP51148 216 aa6.86□□□□□ -1.31
NUP98-220ENST00000533346 SMUG1Q53HV7 270 aa6.86□□□□□ -1.31
NUP98-220ENST00000533346 Q6ZR54 194 aa6.86□□□□□ -1.31
NUP98-220ENST00000533346 ZNF471Q9BX82 626 aaPredicted RBP6.86□□□□□ -1.31
NUP98-220ENST00000533346 MDFICQ9P1T7 246 aa6.86□□□□□ -1.31
NUP98-220ENST00000533346 TRGV1A0A0A0MS02 117 aa6.85□□□□□ -1.31
NUP98-220ENST00000533346 TRAV1-1A0A0B4J248 108 aa6.85□□□□□ -1.31
NUP98-220ENST00000533346 IGHV3-16A0A0C4DH30 117 aa6.85□□□□□ -1.31
NUP98-220ENST00000533346 F6UZH7 168 aa6.85□□□□□ -1.31
NUP98-220ENST00000533346 TYMSP04818 313 aa6.85□□□□□ -1.31
NUP98-220ENST00000533346 PPT1P50897 306 aa6.85□□□□□ -1.31
NUP98-220ENST00000533346 ZNF80P51504 273 aaPredicted RBP6.85□□□□□ -1.31
NUP98-220ENST00000533346 FGF8P55075 233 aaPredicted RBP6.85□□□□□ -1.31
NUP98-220ENST00000533346 PIK3CD-AS1Q5SR53 167 aa6.85□□□□□ -1.31
NUP98-220ENST00000533346 MUC21Q5SSG8 566 aa6.85□□□□□ -1.31
NUP98-220ENST00000533346 DNLZQ5SXM8 178 aa6.85□□□□□ -1.31
NUP98-220ENST00000533346 EIF5AL1Q6IS14 154 aaKnown RBP6.85□□□□□ -1.31
NUP98-220ENST00000533346 VSIG2Q96IQ7 327 aa6.85□□□□□ -1.31
NUP98-220ENST00000533346 UPK3BQ9BT76 320 aa6.85□□□□□ -1.31
NUP98-220ENST00000533346 RPH3ALQ9UNE2 315 aa6.85□□□□□ -1.31
NUP98-220ENST00000533346 ZFP30Q9Y2G7 519 aa6.85□□□□□ -1.31
NUP98-220ENST00000533346 TRGV2A0A075B6R0 118 aa6.84□□□□□ -1.31
NUP98-220ENST00000533346 TRAV26-1A0A087WT03 109 aa6.84□□□□□ -1.31
NUP98-220ENST00000533346 M0R2P5 195 aa6.84□□□□□ -1.31
NUP98-220ENST00000533346 PEX7O00628 323 aa6.84□□□□□ -1.31
NUP98-220ENST00000533346 GNRH2O43555 120 aa6.84□□□□□ -1.31
NUP98-220ENST00000533346 GCGP01275 180 aa6.84□□□□□ -1.31
NUP98-220ENST00000533346 S100A9P06702 114 aaKnown RBP6.84□□□□□ -1.31
NUP98-220ENST00000533346 CCL18P55774 89 aa6.84□□□□□ -1.31
NUP98-220ENST00000533346 OR5I1Q13606 314 aa6.84□□□□□ -1.31
NUP98-220ENST00000533346 FHL2Q14192 279 aa6.84□□□□□ -1.31
NUP98-220ENST00000533346 TMEM183BQ1AE95 376 aa6.84□□□□□ -1.31
NUP98-220ENST00000533346 ZFP69Q49AA0 526 aa6.84□□□□□ -1.31
NUP98-220ENST00000533346 LINC00336Q6ZUF6 198 aa6.84□□□□□ -1.31
NUP98-220ENST00000533346 TMEM183AQ8IXX5 376 aa6.84□□□□□ -1.31
NUP98-220ENST00000533346 ZNRF2Q8NHG8 242 aa6.84□□□□□ -1.31
NUP98-220ENST00000533346 FMC1Q96HJ9 113 aa6.84□□□□□ -1.31
NUP98-220ENST00000533346 C8orf49Q96NF6 230 aa6.84□□□□□ -1.31
NUP98-220ENST00000533346 SDF2L1Q9HCN8 221 aa6.84□□□□□ -1.31
NUP98-220ENST00000533346 PRO0255Q9UI72 69 aa6.84□□□□□ -1.31
NUP98-220ENST00000533346 FABP5P3A8MUU1 101 aa6.83□□□□□ -1.32
NUP98-220ENST00000533346 PFDN1O60925 122 aa6.83□□□□□ -1.32
NUP98-220ENST00000533346 IFNA7P01567 189 aa6.83□□□□□ -1.32
NUP98-220ENST00000533346 H2AFB1P0C5Y9 115 aa6.83□□□□□ -1.32
NUP98-220ENST00000533346 BTF3P20290 206 aaKnown RBP6.83□□□□□ -1.32
NUP98-220ENST00000533346 CRYBA4P53673 196 aa6.83□□□□□ -1.32
NUP98-220ENST00000533346 PRNTQ86SH4 94 aa6.83□□□□□ -1.32
NUP98-220ENST00000533346 SLC51BQ86UW2 128 aa6.83□□□□□ -1.32
NUP98-220ENST00000533346 UBE2DNLQ8IWF7 75 aa6.83□□□□□ -1.32
NUP98-220ENST00000533346 SFT2D1Q8WV19 159 aa6.83□□□□□ -1.32
NUP98-220ENST00000533346 SGK494Q96LW2 274 aa6.83□□□□□ -1.32
NUP98-220ENST00000533346 LINC00479Q96M42 142 aa6.83□□□□□ -1.32
NUP98-220ENST00000533346 C9orf85Q96MD7 179 aa6.83□□□□□ -1.32
NUP98-220ENST00000533346 TXNDC17Q9BRA2 123 aa6.83□□□□□ -1.32
NUP98-220ENST00000533346 C11orf21Q9P2W6 132 aa6.83□□□□□ -1.32
NUP98-220ENST00000533346 LINC00588Q9Y4M8 146 aa6.83□□□□□ -1.32
NUP98-220ENST00000533346 FAT2Q9NYQ8 4349 aa6.83□□□□□ -1.32
NUP98-220ENST00000533346 A0A096LPF7 62 aa6.82□□□□□ -1.32
NUP98-220ENST00000533346 TRAV4A0A0B4J268 109 aa6.82□□□□□ -1.32
NUP98-220ENST00000533346 IGKV3D-20A0A0C4DH25 116 aa6.82□□□□□ -1.32
NUP98-220ENST00000533346 NUDT3O95989 172 aa6.82□□□□□ -1.32
NUP98-220ENST00000533346 LTAP01374 205 aa6.82□□□□□ -1.32
NUP98-220ENST00000533346 SULT1A2P50226 295 aa6.82□□□□□ -1.32
NUP98-220ENST00000533346 UBE2G2P60604 165 aa6.82□□□□□ -1.32
NUP98-220ENST00000533346 Q86TA4 180 aa6.82□□□□□ -1.32
NUP98-220ENST00000533346 FAM213BQ8TBF2 198 aa6.82□□□□□ -1.32
NUP98-220ENST00000533346 MRPL16Q9NX20 251 aaKnown RBP6.82□□□□□ -1.32
NUP98-220ENST00000533346 HHLA3Q9XRX5 114 aa6.82□□□□□ -1.32
NUP98-220ENST00000533346 PAGE4O60829 102 aa6.81□□□□□ -1.32
NUP98-220ENST00000533346 RNASE3P12724 160 aaKnown RBP6.81□□□□□ -1.32
NUP98-220ENST00000533346 CRIP1P50238 77 aa6.81□□□□□ -1.32
NUP98-220ENST00000533346 ESRGQ1W209 222 aa6.81□□□□□ -1.32
NUP98-220ENST00000533346 ZNF674Q2M3X9 581 aa6.81□□□□□ -1.32
NUP98-220ENST00000533346 ZNF575Q86XF7 245 aa6.81□□□□□ -1.32
NUP98-220ENST00000533346 MLST8Q9BVC4 326 aa6.81□□□□□ -1.32
NUP98-220ENST00000533346 MRPS16Q9Y3D3 137 aaKnown RBP6.81□□□□□ -1.32
NUP98-220ENST00000533346 TRAV34A0A0B4J273 112 aa6.8□□□□□ -1.32
NUP98-220ENST00000533346 A0A0J9YY99 117 aa6.8□□□□□ -1.32
NUP98-220ENST00000533346 A0A1W2PPQ1 181 aa6.8□□□□□ -1.32
NUP98-220ENST00000533346 TEX46H3BTG2 121 aa6.8□□□□□ -1.32
NUP98-220ENST00000533346 RS1O15537 224 aa6.8□□□□□ -1.32
NUP98-220ENST00000533346 ORM1P02763 201 aa6.8□□□□□ -1.32
NUP98-220ENST00000533346 UBE2G1P62253 170 aa6.8□□□□□ -1.32
NUP98-220ENST00000533346 MRPL23Q16540 153 aaKnown RBP6.8□□□□□ -1.32
NUP98-220ENST00000533346 CST9LP1Q5W188 147 aa6.8□□□□□ -1.32
NUP98-220ENST00000533346 AKAP14Q86UN6 197 aa6.8□□□□□ -1.32
NUP98-220ENST00000533346 ZNF479Q96JC4 524 aa6.8□□□□□ -1.32
NUP98-220ENST00000533346 MANBALQ9NQG1 85 aa6.8□□□□□ -1.32
NUP98-220ENST00000533346 IL36BQ9NZH7 164 aa6.8□□□□□ -1.32
NUP98-220ENST00000533346 NAGKQ9UJ70 344 aa6.8□□□□□ -1.32
NUP98-220ENST00000533346 ABCA13Q86UQ4 5058 aa6.8□□□□□ -1.32
NUP98-220ENST00000533346 NBDYA0A0U1RRE5 68 aa6.79□□□□□ -1.32
NUP98-220ENST00000533346 RTL8CO15255 209 aa6.79□□□□□ -1.32
NUP98-220ENST00000533346 PAX4O43316 350 aa6.79□□□□□ -1.32
NUP98-220ENST00000533346 CXCL1P09341 107 aa6.79□□□□□ -1.32
NUP98-220ENST00000533346 LINC01559Q495D7 138 aa6.79□□□□□ -1.32
NUP98-220ENST00000533346 C9orf62Q8N4C0 152 aa6.79□□□□□ -1.32
NUP98-220ENST00000533346 OR4C5Q8NGB2 326 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms