RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 RNF114Q9Y508 228 aa9.69□□□□□ -0.86
BDNF-218ENST00000533246 SRSF1Q07955 248 aaKnown RBP eCLIP9.68□□□□□ -0.86
BDNF-218ENST00000533246 FOXI1Q12951 378 aa9.68□□□□□ -0.86
BDNF-218ENST00000533246 FAM120AOSQ5T036 256 aa9.68□□□□□ -0.86
BDNF-218ENST00000533246 OOSP1A8MZH6 123 aa9.68□□□□□ -0.86
BDNF-218ENST00000533246 K7EMI3 77 aa9.68□□□□□ -0.86
BDNF-218ENST00000533246 PIP4P2Q8N4L2 257 aa9.68□□□□□ -0.86
BDNF-218ENST00000533246 TRAV25A0A0B4J276 109 aa9.68□□□□□ -0.86
BDNF-218ENST00000533246 RNF223E7ERA6 249 aa9.68□□□□□ -0.86
BDNF-218ENST00000533246 NDUFV3P56181 108 aaKnown RBP9.68□□□□□ -0.86
BDNF-218ENST00000533246 TRGV2A0A075B6R0 118 aa9.67□□□□□ -0.86
BDNF-218ENST00000533246 DPM2O94777 84 aa9.67□□□□□ -0.86
BDNF-218ENST00000533246 HTN3P15516 51 aa9.67□□□□□ -0.86
BDNF-218ENST00000533246 ZC2HC1BQ5TFG8 222 aa9.67□□□□□ -0.86
BDNF-218ENST00000533246 TMEM158Q8WZ71 300 aa9.67□□□□□ -0.86
BDNF-218ENST00000533246 CHAC1Q9BUX1 264 aa9.67□□□□□ -0.86
BDNF-218ENST00000533246 TMEM131Q92545 1883 aa9.67□□□□□ -0.86
BDNF-218ENST00000533246 BRWD1-AS2P59051 145 aa9.67□□□□□ -0.86
BDNF-218ENST00000533246 SPANXB1Q9NS25 103 aaPredicted RBP9.67□□□□□ -0.86
BDNF-218ENST00000533246 RNASE1P07998 156 aaKnown RBP9.67□□□□□ -0.86
BDNF-218ENST00000533246 IL17RELQ6ZVW7 336 aa9.67□□□□□ -0.86
BDNF-218ENST00000533246 VPREB3Q9UKI3 123 aa9.67□□□□□ -0.86
BDNF-218ENST00000533246 LINC00311Q8N616 119 aa9.66□□□□□ -0.86
BDNF-218ENST00000533246 ZNF491Q8N8L2 437 aa9.66□□□□□ -0.86
BDNF-218ENST00000533246 C15orf53Q8NAA6 179 aa9.66□□□□□ -0.86
BDNF-218ENST00000533246 PRRC2AP48634 2157 aaKnown RBP9.66□□□□□ -0.86
BDNF-218ENST00000533246 LINC00173Q6ZV60 143 aa9.66□□□□□ -0.86
BDNF-218ENST00000533246 KNCNA6PVL3 124 aa9.66□□□□□ -0.86
BDNF-218ENST00000533246 UBE2E1P51965 193 aa9.66□□□□□ -0.86
BDNF-218ENST00000533246 PATE2Q6UY27 113 aa9.66□□□□□ -0.86
BDNF-218ENST00000533246 FOXI2Q6ZQN5 318 aa9.66□□□□□ -0.86
BDNF-218ENST00000533246 LINC00477Q96M19 166 aa9.66□□□□□ -0.86
BDNF-218ENST00000533246 C9JAW5 83 aa9.66□□□□□ -0.86
BDNF-218ENST00000533246 PPP1R17O96001 155 aa9.66□□□□□ -0.86
BDNF-218ENST00000533246 INSL3P51460 131 aa9.66□□□□□ -0.86
BDNF-218ENST00000533246 UBE2E2Q96LR5 201 aa9.66□□□□□ -0.86
BDNF-218ENST00000533246 TRAV26-2A0A0B4J265 109 aa9.65□□□□□ -0.86
BDNF-218ENST00000533246 PMVKQ15126 192 aa9.65□□□□□ -0.86
BDNF-218ENST00000533246 ODF3L1Q8IXM7 274 aa9.65□□□□□ -0.86
BDNF-218ENST00000533246 C11orf52Q96A22 123 aa9.65□□□□□ -0.86
BDNF-218ENST00000533246 KAAG1Q9UBP8 84 aa9.65□□□□□ -0.86
BDNF-218ENST00000533246 IGHV3-53P01767 116 aa9.65□□□□□ -0.86
BDNF-218ENST00000533246 IGKCP01834 107 aa9.65□□□□□ -0.86
BDNF-218ENST00000533246 COX6CP09669 75 aa9.65□□□□□ -0.86
BDNF-218ENST00000533246 ZNF876PQ49A33 203 aa9.65□□□□□ -0.86
BDNF-218ENST00000533246 SPATA25Q9BR10 227 aa9.65□□□□□ -0.86
BDNF-218ENST00000533246 OVOL1O14753 267 aa9.65□□□□□ -0.87
BDNF-218ENST00000533246 LYPD1Q8N2G4 141 aa9.65□□□□□ -0.87
BDNF-218ENST00000533246 TRBV7-1A0A0A6YYK4 115 aa9.64□□□□□ -0.87
BDNF-218ENST00000533246 ZNF815PA8K554 130 aa9.64□□□□□ -0.87
BDNF-218ENST00000533246 IGKV1-17P01599 117 aa9.64□□□□□ -0.87
BDNF-218ENST00000533246 PRR25Q96S07 402 aa9.64□□□□□ -0.87
BDNF-218ENST00000533246 TP53TG3Q9ULZ0 132 aa9.64□□□□□ -0.87
BDNF-218ENST00000533246 F6UB75 175 aa9.64□□□□□ -0.87
BDNF-218ENST00000533246 DSCAMO60469 2012 aa9.64□□□□□ -0.87
BDNF-218ENST00000533246 H7C1H1 209 aa9.64□□□□□ -0.87
BDNF-218ENST00000533246 NBL1P41271 181 aa9.64□□□□□ -0.87
BDNF-218ENST00000533246 PAPPA-AS1Q5QFB9 102 aa9.64□□□□□ -0.87
BDNF-218ENST00000533246 C9orf139Q6ZV77 190 aa9.64□□□□□ -0.87
BDNF-218ENST00000533246 NRGNQ92686 78 aa9.64□□□□□ -0.87
BDNF-218ENST00000533246 HCFC1P51610 2035 aa9.63□□□□□ -0.87
BDNF-218ENST00000533246 IGHV4-39P01824 125 aa9.63□□□□□ -0.87
BDNF-218ENST00000533246 MSMBP08118 114 aa9.63□□□□□ -0.87
BDNF-218ENST00000533246 ZNF295-AS1Q8N0V1 137 aa9.63□□□□□ -0.87
BDNF-218ENST00000533246 SCRT2Q9NQ03 307 aa9.63□□□□□ -0.87
BDNF-218ENST00000533246 LAGE3Q14657 143 aa9.63□□□□□ -0.87
BDNF-218ENST00000533246 C1orf229Q6ZS94 237 aaPredicted RBP9.63□□□□□ -0.87
BDNF-218ENST00000533246 STHQ8IWL8 128 aa9.63□□□□□ -0.87
BDNF-218ENST00000533246 SIGLEC8Q9NYZ4 499 aa9.63□□□□□ -0.87
BDNF-218ENST00000533246 V9GYY9 64 aa9.63□□□□□ -0.87
BDNF-218ENST00000533246 TRAV12-2A0A075B6T6 113 aa9.63□□□□□ -0.87
BDNF-218ENST00000533246 XGP55808 180 aa9.63□□□□□ -0.87
BDNF-218ENST00000533246 SPINK13Q1W4C9 94 aa9.63□□□□□ -0.87
BDNF-218ENST00000533246 NSUN5P1Q3KNT7 163 aa9.63□□□□□ -0.87
BDNF-218ENST00000533246 PCP2Q8IVA1 136 aa9.63□□□□□ -0.87
BDNF-218ENST00000533246 PRO3102Q9H379 93 aa9.63□□□□□ -0.87
BDNF-218ENST00000533246 CSDC2Q9Y534 153 aaKnown RBP9.63□□□□□ -0.87
BDNF-218ENST00000533246 WDFY4Q6ZS81 3184 aa9.63□□□□□ -0.87
BDNF-218ENST00000533246 NPC2P61916 151 aa9.62□□□□□ -0.87
BDNF-218ENST00000533246 CHD9Q3L8U1 2897 aa9.62□□□□□ -0.87
BDNF-218ENST00000533246 IGHV1-69DA0A0B4J2H0 117 aa9.62□□□□□ -0.87
BDNF-218ENST00000533246 IGHV1-69P01742 117 aa9.62□□□□□ -0.87
BDNF-218ENST00000533246 FXYD2P54710 66 aa9.62□□□□□ -0.87
BDNF-218ENST00000533246 ORMDL2Q53FV1 153 aa9.62□□□□□ -0.87
BDNF-218ENST00000533246 TMEM101Q96IK0 257 aa9.62□□□□□ -0.87
BDNF-218ENST00000533246 CDH23Q9H251 3354 aa9.61□□□□□ -0.87
BDNF-218ENST00000533246 IGHV1-24A0A0C4DH33 117 aa9.61□□□□□ -0.87
BDNF-218ENST00000533246 DEFB131AP59861 70 aa9.61□□□□□ -0.87
BDNF-218ENST00000533246 PDE6HQ13956 83 aa9.61□□□□□ -0.87
BDNF-218ENST00000533246 CIRBPQ14011 172 aaKnown RBP9.61□□□□□ -0.87
BDNF-218ENST00000533246 FAM104BQ5XKR9 115 aa9.61□□□□□ -0.87
BDNF-218ENST00000533246 C11orf1Q9H5F2 150 aa9.61□□□□□ -0.87
BDNF-218ENST00000533246 DAZ1Q9NQZ3 744 aaKnown RBP9.61□□□□□ -0.87
BDNF-218ENST00000533246 SMIM27A0A1W2PRY6 76 aa9.61□□□□□ -0.87
BDNF-218ENST00000533246 IGLL5B9A064 214 aa9.61□□□□□ -0.87
BDNF-218ENST00000533246 FAM110DQ8TAY7 271 aaPredicted RBP9.61□□□□□ -0.87
BDNF-218ENST00000533246 MRPL51Q4U2R6 128 aaKnown RBP9.6□□□□□ -0.87
BDNF-218ENST00000533246 Q8NA96 180 aa9.6□□□□□ -0.87
BDNF-218ENST00000533246 PHLDA1Q8WV24 401 aaPredicted RBP9.6□□□□□ -0.87
BDNF-218ENST00000533246 THAP8Q8NA92 274 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms