RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 KCNS1Q96KK3 526 aa20.96■□□□□ 0.95
SSSCA1-207ENST00000533115 C8orf49Q96NF6 230 aa20.96■□□□□ 0.95
SSSCA1-207ENST00000533115 SDF2L1Q9HCN8 221 aa20.96■□□□□ 0.95
SSSCA1-207ENST00000533115 PRO0255Q9UI72 69 aa20.96■□□□□ 0.95
SSSCA1-207ENST00000533115 TYMSP04818 313 aa20.95■□□□□ 0.94
SSSCA1-207ENST00000533115 UPK3BQ9BT76 320 aa20.95■□□□□ 0.94
SSSCA1-207ENST00000533115 HHLA3Q9XRX5 114 aa20.95■□□□□ 0.94
SSSCA1-207ENST00000533115 FBLL1A6NHQ2 334 aaKnown RBP20.94■□□□□ 0.94
SSSCA1-207ENST00000533115 ZNF80P51504 273 aaPredicted RBP20.94■□□□□ 0.94
SSSCA1-207ENST00000533115 FGF8P55075 233 aaPredicted RBP20.94■□□□□ 0.94
SSSCA1-207ENST00000533115 ZNF345Q14585 488 aa20.94■□□□□ 0.94
SSSCA1-207ENST00000533115 PRNTQ86SH4 94 aa20.94■□□□□ 0.94
SSSCA1-207ENST00000533115 KCNRGQ8N5I3 272 aa20.94■□□□□ 0.94
SSSCA1-207ENST00000533115 MRPS16Q9Y3D3 137 aaKnown RBP20.94■□□□□ 0.94
SSSCA1-207ENST00000533115 CRYBA4P53673 196 aa20.93■□□□□ 0.94
SSSCA1-207ENST00000533115 UBE2G2P60604 165 aa20.93■□□□□ 0.94
SSSCA1-207ENST00000533115 ICOSQ9Y6W8 199 aa20.93■□□□□ 0.94
SSSCA1-207ENST00000533115 PKD1P98161 4303 aa20.92■□□□□ 0.94
SSSCA1-207ENST00000533115 GCGP01275 180 aa20.92■□□□□ 0.94
SSSCA1-207ENST00000533115 ZNF479Q96JC4 524 aa20.92■□□□□ 0.94
SSSCA1-207ENST00000533115 TRGV4A0A0C4DH28 118 aa20.91■□□□□ 0.94
SSSCA1-207ENST00000533115 HMSDA8MTL9 139 aa20.91■□□□□ 0.94
SSSCA1-207ENST00000533115 M0R2P5 195 aa20.91■□□□□ 0.94
SSSCA1-207ENST00000533115 SFTA3P0C7M3 94 aa20.91■□□□□ 0.94
SSSCA1-207ENST00000533115 ZFP69Q49AA0 526 aa20.91■□□□□ 0.94
SSSCA1-207ENST00000533115 SMUG1Q53HV7 270 aa20.91■□□□□ 0.94
SSSCA1-207ENST00000533115 OR11H4Q8NGC9 324 aa20.91■□□□□ 0.94
SSSCA1-207ENST00000533115 PKHD1P08F94 4074 aa20.91■□□□□ 0.94
SSSCA1-207ENST00000533115 MAP1LC3B2A6NCE7 125 aa20.9■□□□□ 0.94
SSSCA1-207ENST00000533115 IFNA7P01567 189 aa20.9■□□□□ 0.94
SSSCA1-207ENST00000533115 PFN1P07737 140 aaKnown RBP20.9■□□□□ 0.94
SSSCA1-207ENST00000533115 SAPCD1Q5SSQ6 148 aa20.9■□□□□ 0.94
SSSCA1-207ENST00000533115 C6orf223Q8N319 242 aa20.9■□□□□ 0.94
SSSCA1-207ENST00000533115 LINC00479Q96M42 142 aa20.9■□□□□ 0.94
SSSCA1-207ENST00000533115 NKX6-2Q9C056 277 aaPredicted RBP20.9■□□□□ 0.94
SSSCA1-207ENST00000533115 MAP1LC3BQ9GZQ8 125 aa20.9■□□□□ 0.94
SSSCA1-207ENST00000533115 C11orf21Q9P2W6 132 aa20.9■□□□□ 0.94
SSSCA1-207ENST00000533115 FAM74A7A6NL05 159 aa20.89■□□□□ 0.93
SSSCA1-207ENST00000533115 TRAV4A0A0B4J268 109 aa20.88■□□□□ 0.93
SSSCA1-207ENST00000533115 TRAV34A0A0B4J273 112 aa20.88■□□□□ 0.93
SSSCA1-207ENST00000533115 A0A0D9SG52 128 aa20.87■□□□□ 0.93
SSSCA1-207ENST00000533115 PEX7O00628 323 aa20.87■□□□□ 0.93
SSSCA1-207ENST00000533115 PPT1P50897 306 aa20.87■□□□□ 0.93
SSSCA1-207ENST00000533115 MRPL23Q16540 153 aaKnown RBP20.86■□□□□ 0.93
SSSCA1-207ENST00000533115 TTC32Q5I0X7 151 aa20.86■□□□□ 0.93
SSSCA1-207ENST00000533115 OR4C5Q8NGB2 326 aa20.86■□□□□ 0.93
SSSCA1-207ENST00000533115 HIST1H2BAQ96A08 127 aa20.86■□□□□ 0.93
SSSCA1-207ENST00000533115 FHITP49789 147 aa20.85■□□□□ 0.93
SSSCA1-207ENST00000533115 STOML3Q8TAV4 291 aa20.85■□□□□ 0.93
SSSCA1-207ENST00000533115 ARL2-SNX15V9GYD0 113 aa20.85■□□□□ 0.93
SSSCA1-207ENST00000533115 SEC11BP0C7V7 166 aa20.84■□□□□ 0.93
SSSCA1-207ENST00000533115 KRTAP1-5Q9BYS1 174 aa20.84■□□□□ 0.93
SSSCA1-207ENST00000533115 KANTRA0A1W2PQU2 76 aa20.83■□□□□ 0.93
SSSCA1-207ENST00000533115 BCL2L11O43521 198 aa20.83■□□□□ 0.93
SSSCA1-207ENST00000533115 ZNF471Q9BX82 626 aaPredicted RBP20.83■□□□□ 0.93
SSSCA1-207ENST00000533115 A0A1W2PPQ1 181 aa20.82■□□□□ 0.92
SSSCA1-207ENST00000533115 K7EQD1 137 aa20.81■□□□□ 0.92
SSSCA1-207ENST00000533115 NEGR1Q7Z3B1 354 aa20.81■□□□□ 0.92
SSSCA1-207ENST00000533115 Q86TA4 180 aa20.81■□□□□ 0.92
SSSCA1-207ENST00000533115 HERC2O95714 4834 aa20.8■□□□□ 0.92
SSSCA1-207ENST00000533115 DNAH11Q96DT5 4516 aa20.8■□□□□ 0.92
SSSCA1-207ENST00000533115 UMAD1C9J7I0 102 aa20.8■□□□□ 0.92
SSSCA1-207ENST00000533115 C9JCJ5 164 aa20.8■□□□□ 0.92
SSSCA1-207ENST00000533115 ORM1P02763 201 aa20.8■□□□□ 0.92
SSSCA1-207ENST00000533115 TNP2Q05952 138 aa20.8■□□□□ 0.92
SSSCA1-207ENST00000533115 ZNF876PQ49A33 203 aa20.8■□□□□ 0.92
SSSCA1-207ENST00000533115 LYPD5Q6UWN5 251 aa20.8■□□□□ 0.92
SSSCA1-207ENST00000533115 PCNPQ8WW12 178 aaKnown RBP20.8■□□□□ 0.92
SSSCA1-207ENST00000533115 C9orf85Q96MD7 179 aa20.8■□□□□ 0.92
SSSCA1-207ENST00000533115 GYPEP15421 78 aa20.79■□□□□ 0.92
SSSCA1-207ENST00000533115 SRIP30626 198 aa20.79■□□□□ 0.92
SSSCA1-207ENST00000533115 FAM213BQ8TBF2 198 aa20.79■□□□□ 0.92
SSSCA1-207ENST00000533115 DYNC1H1Q14204 4646 aaKnown RBP20.78■□□□□ 0.92
SSSCA1-207ENST00000533115 FABP5P3A8MUU1 101 aa20.78■□□□□ 0.92
SSSCA1-207ENST00000533115 SIVA1O15304 175 aa20.78■□□□□ 0.92
SSSCA1-207ENST00000533115 NXPH4O95158 308 aa20.78■□□□□ 0.92
SSSCA1-207ENST00000533115 CST9LP1Q5W188 147 aa20.78■□□□□ 0.92
SSSCA1-207ENST00000533115 MBD3L1Q8WWY6 194 aa20.78■□□□□ 0.92
SSSCA1-207ENST00000533115 TCEAL7Q9BRU2 100 aa20.78■□□□□ 0.92
SSSCA1-207ENST00000533115 RNASE3P12724 160 aaKnown RBP20.77■□□□□ 0.92
SSSCA1-207ENST00000533115 EIF5AP63241 154 aaKnown RBP20.77■□□□□ 0.92
SSSCA1-207ENST00000533115 SFT2D1Q8WV19 159 aa20.77■□□□□ 0.92
SSSCA1-207ENST00000533115 FMC1Q96HJ9 113 aa20.77■□□□□ 0.92
SSSCA1-207ENST00000533115 KIAA1109Q2LD37 5005 aa20.76■□□□□ 0.91
SSSCA1-207ENST00000533115 IGKV3D-20A0A0C4DH25 116 aa20.76■□□□□ 0.91
SSSCA1-207ENST00000533115 TMUB2Q71RG4 321 aa20.76■□□□□ 0.91
SSSCA1-207ENST00000533115 PTH2Q96A98 100 aa20.76■□□□□ 0.91
SSSCA1-207ENST00000533115 ZFP30Q9Y2G7 519 aa20.76■□□□□ 0.91
SSSCA1-207ENST00000533115 RS1O15537 224 aa20.75■□□□□ 0.91
SSSCA1-207ENST00000533115 PFDN1O60925 122 aa20.75■□□□□ 0.91
SSSCA1-207ENST00000533115 GATA1P15976 413 aaPredicted RBP20.75■□□□□ 0.91
SSSCA1-207ENST00000533115 UBE2G1P62253 170 aa20.75■□□□□ 0.91
SSSCA1-207ENST00000533115 DPPA3Q6W0C5 159 aa20.75■□□□□ 0.91
SSSCA1-207ENST00000533115 PAGE4O60829 102 aa20.74■□□□□ 0.91
SSSCA1-207ENST00000533115 CFAP126Q5VTH2 177 aa20.74■□□□□ 0.91
SSSCA1-207ENST00000533115 COX8CQ7Z4L0 72 aa20.74■□□□□ 0.91
SSSCA1-207ENST00000533115 ZC2HC1AQ96GY0 325 aa20.74■□□□□ 0.91
SSSCA1-207ENST00000533115 TXNDC17Q9BRA2 123 aa20.74■□□□□ 0.91
SSSCA1-207ENST00000533115 PGPEP1LA6NFU8 196 aa20.73■□□□□ 0.91
SSSCA1-207ENST00000533115 CIDEAO60543 219 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms