RNA–Protein interactions for RNA: ENST00000533064.1

TRIM3-212, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 1,654 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-212ENST00000533064 ZFAND2AQ8N6M9 145 aa10.46□□□□□ -0.74
TRIM3-212ENST00000533064 C1QTNF4Q9BXJ3 329 aa10.46□□□□□ -0.74
TRIM3-212ENST00000533064 GFRA4Q9GZZ7 299 aa10.46□□□□□ -0.74
TRIM3-212ENST00000533064 NAT8BQ9UHF3 227 aa10.46□□□□□ -0.74
TRIM3-212ENST00000533064 FABP5P3A8MUU1 101 aa10.45□□□□□ -0.74
TRIM3-212ENST00000533064 KLLNB2CW77 178 aa10.45□□□□□ -0.74
TRIM3-212ENST00000533064 IGHV4-30-4P0DP06 118 aa10.45□□□□□ -0.74
TRIM3-212ENST00000533064 OR2D3Q8NGH3 330 aa10.45□□□□□ -0.74
TRIM3-212ENST00000533064 NEU1Q99519 415 aa10.45□□□□□ -0.74
TRIM3-212ENST00000533064 TRAV12-2A0A075B6T6 113 aa10.44□□□□□ -0.74
TRIM3-212ENST00000533064 C7orf71A4D174 169 aa10.44□□□□□ -0.74
TRIM3-212ENST00000533064 PHOX2AO14813 284 aa10.44□□□□□ -0.74
TRIM3-212ENST00000533064 SH2D1AO60880 128 aa10.44□□□□□ -0.74
TRIM3-212ENST00000533064 NUP35Q8NFH5 326 aa10.44□□□□□ -0.74
TRIM3-212ENST00000533064 TRAV21A0A0B4J279 112 aa10.44□□□□□ -0.74
TRIM3-212ENST00000533064 HIGD1CA8MV81 97 aa10.44□□□□□ -0.74
TRIM3-212ENST00000533064 INSP01308 110 aa10.44□□□□□ -0.74
TRIM3-212ENST00000533064 APOC4P55056 127 aa10.44□□□□□ -0.74
TRIM3-212ENST00000533064 COX19Q49B96 90 aa10.44□□□□□ -0.74
TRIM3-212ENST00000533064 GFI1BQ5VTD9 330 aa10.44□□□□□ -0.74
TRIM3-212ENST00000533064 CSTL1Q9H114 145 aa10.44□□□□□ -0.74
TRIM3-212ENST00000533064 XCL2Q9UBD3 114 aa10.44□□□□□ -0.74
TRIM3-212ENST00000533064 DNHD1Q96M86 4753 aa10.43□□□□□ -0.74
TRIM3-212ENST00000533064 TRAV12-3A0A0B4J271 114 aa10.43□□□□□ -0.74
TRIM3-212ENST00000533064 ZNF80P51504 273 aaPredicted RBP10.43□□□□□ -0.74
TRIM3-212ENST00000533064 KIR3DS1Q14943 382 aa10.43□□□□□ -0.74
TRIM3-212ENST00000533064 PRR9Q5T870 116 aa10.43□□□□□ -0.74
TRIM3-212ENST00000533064 Q6AWC8 147 aa10.43□□□□□ -0.74
TRIM3-212ENST00000533064 KIR2DL5BA0A0G2JN68 375 aa10.42□□□□□ -0.74
TRIM3-212ENST00000533064 KIR2DL5BA0A0G2JPC4 375 aa10.42□□□□□ -0.74
TRIM3-212ENST00000533064 XKRY2A2RUG3 117 aa10.42□□□□□ -0.74
TRIM3-212ENST00000533064 A8MZ25 164 aa10.42□□□□□ -0.74
TRIM3-212ENST00000533064 FOXA3P55318 350 aaPredicted RBP10.42□□□□□ -0.74
TRIM3-212ENST00000533064 WDR73Q6P4I2 378 aa10.42□□□□□ -0.74
TRIM3-212ENST00000533064 RASL11AQ6T310 242 aa10.42□□□□□ -0.74
TRIM3-212ENST00000533064 KIR2DL5AQ8N109 375 aa10.42□□□□□ -0.74
TRIM3-212ENST00000533064 KIR2DL5BQ8NHK3 375 aa10.42□□□□□ -0.74
TRIM3-212ENST00000533064 GTSF1Q8WW33 167 aa10.42□□□□□ -0.74
TRIM3-212ENST00000533064 FRZBQ92765 325 aa10.42□□□□□ -0.74
TRIM3-212ENST00000533064 C20orf144Q9BQM9 153 aa10.42□□□□□ -0.74
TRIM3-212ENST00000533064 GNB1LQ9BYB4 327 aa10.42□□□□□ -0.74
TRIM3-212ENST00000533064 TRAPPC1Q9Y5R8 145 aa10.42□□□□□ -0.74
TRIM3-212ENST00000533064 TMEM189A5PLL7 270 aa10.41□□□□□ -0.74
TRIM3-212ENST00000533064 SPINK4O60575 86 aa10.41□□□□□ -0.74
TRIM3-212ENST00000533064 HIST1H2BKO60814 126 aa10.41□□□□□ -0.74
TRIM3-212ENST00000533064 HIST1H2BJP06899 126 aa10.41□□□□□ -0.74
TRIM3-212ENST00000533064 HIST1H2BOP23527 126 aa10.41□□□□□ -0.74
TRIM3-212ENST00000533064 HIST1H2BBP33778 126 aa10.41□□□□□ -0.74
TRIM3-212ENST00000533064 HIST1H2BDP58876 126 aa10.41□□□□□ -0.74
TRIM3-212ENST00000533064 HIST1H2BCP62807 126 aa10.41□□□□□ -0.74
TRIM3-212ENST00000533064 HIST2H2BEQ16778 126 aa10.41□□□□□ -0.74
TRIM3-212ENST00000533064 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.41□□□□□ -0.74
TRIM3-212ENST00000533064 MRPL54Q6P161 138 aaKnown RBP10.41□□□□□ -0.74
TRIM3-212ENST00000533064 ATP5L2Q7Z4Y8 100 aa10.41□□□□□ -0.74
TRIM3-212ENST00000533064 HIST1H2BHQ93079 126 aa10.41□□□□□ -0.74
TRIM3-212ENST00000533064 HIST1H2BNQ99877 126 aa10.41□□□□□ -0.74
TRIM3-212ENST00000533064 HIST1H2BMQ99879 126 aa10.41□□□□□ -0.74
TRIM3-212ENST00000533064 TMEM208Q9BTX3 173 aa10.41□□□□□ -0.74
TRIM3-212ENST00000533064 CRXO43186 299 aaPredicted RBP10.41□□□□□ -0.74
TRIM3-212ENST00000533064 ORM1P02763 201 aa10.41□□□□□ -0.74
TRIM3-212ENST00000533064 MT-ND6P03923 174 aa10.41□□□□□ -0.74
TRIM3-212ENST00000533064 S100A6P06703 90 aa10.41□□□□□ -0.74
TRIM3-212ENST00000533064 TRGC1P0CF51 173 aa10.41□□□□□ -0.74
TRIM3-212ENST00000533064 RPS20P60866 119 aaKnown RBP10.41□□□□□ -0.74
TRIM3-212ENST00000533064 FABP9Q0Z7S8 132 aa10.41□□□□□ -0.74
TRIM3-212ENST00000533064 TMEM256Q8N2U0 113 aa10.41□□□□□ -0.74
TRIM3-212ENST00000533064 NAGKQ9UJ70 344 aa10.41□□□□□ -0.74
TRIM3-212ENST00000533064 PRB2P02812 416 aaPredicted RBP10.4□□□□□ -0.74
TRIM3-212ENST00000533064 GZMBP10144 247 aa10.4□□□□□ -0.74
TRIM3-212ENST00000533064 FAM159AQ6UWV7 190 aa10.4□□□□□ -0.74
TRIM3-212ENST00000533064 GOLT1BQ9Y3E0 138 aa10.4□□□□□ -0.74
TRIM3-212ENST00000533064 SNURFLB1AK76 121 aa10.39□□□□□ -0.75
TRIM3-212ENST00000533064 UBE2CO00762 179 aa10.39□□□□□ -0.75
TRIM3-212ENST00000533064 ZNF324O75467 553 aaPredicted RBP10.39□□□□□ -0.75
TRIM3-212ENST00000533064 FRMD6-AS1P0C7T7 363 aa10.39□□□□□ -0.75
TRIM3-212ENST00000533064 LINC01559Q495D7 138 aa10.39□□□□□ -0.75
TRIM3-212ENST00000533064 TMEM136Q6ZRR5 245 aa10.39□□□□□ -0.75
TRIM3-212ENST00000533064 KCNS1Q96KK3 526 aa10.39□□□□□ -0.75
TRIM3-212ENST00000533064 PGLYRP4Q96LB8 373 aa10.39□□□□□ -0.75
TRIM3-212ENST00000533064 A0A1B0GXF2 115 aa10.38□□□□□ -0.75
TRIM3-212ENST00000533064 HLA-DQA1P01909 254 aa10.38□□□□□ -0.75
TRIM3-212ENST00000533064 DEFB121Q5J5C9 76 aa10.38□□□□□ -0.75
TRIM3-212ENST00000533064 MUC21Q5SSG8 566 aa10.38□□□□□ -0.75
TRIM3-212ENST00000533064 LINC00518Q8N0U6 118 aa10.38□□□□□ -0.75
TRIM3-212ENST00000533064 LINC01587Q99440 93 aa10.38□□□□□ -0.75
TRIM3-212ENST00000533064 MRPL18Q9H0U6 180 aaKnown RBP10.38□□□□□ -0.75
TRIM3-212ENST00000533064 NBEAL2Q6ZNJ1 2754 aa10.38□□□□□ -0.75
TRIM3-212ENST00000533064 IGHV3OR16-12A0A075B7B8 117 aa10.38□□□□□ -0.75
TRIM3-212ENST00000533064 C5orf52A6NGY3 159 aa10.38□□□□□ -0.75
TRIM3-212ENST00000533064 K7EIL1 84 aa10.38□□□□□ -0.75
TRIM3-212ENST00000533064 GIG44P09565 113 aaPredicted RBP10.38□□□□□ -0.75
TRIM3-212ENST00000533064 IGHV1OR15-1A0A075B7D0 117 aa10.37□□□□□ -0.75
TRIM3-212ENST00000533064 RAB4BP61018 213 aa10.37□□□□□ -0.75
TRIM3-212ENST00000533064 SNRPEP62304 92 aaKnown RBP10.37□□□□□ -0.75
TRIM3-212ENST00000533064 HBBP68871 147 aa10.37□□□□□ -0.75
TRIM3-212ENST00000533064 Q6ZQT7 251 aa10.37□□□□□ -0.75
TRIM3-212ENST00000533064 TMSB15BA0A087X1C1 80 aa10.36□□□□□ -0.75
TRIM3-212ENST00000533064 A0A1B0GUT8 65 aa10.36□□□□□ -0.75
TRIM3-212ENST00000533064 RBMY1A1P0DJD3 496 aaKnown RBP10.36□□□□□ -0.75
TRIM3-212ENST00000533064 RBMY1CP0DJD4 496 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 232.1 ms