RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 TCRAP04437 139 aa10.79□□□□□ -0.68
CPSF1-210ENST00000532935 TCL1AP56279 114 aa10.79□□□□□ -0.68
CPSF1-210ENST00000532935 IBA57Q5T440 356 aaKnown RBP10.79□□□□□ -0.68
CPSF1-210ENST00000532935 TXNDC17Q9BRA2 123 aa10.79□□□□□ -0.68
CPSF1-210ENST00000532935 EIF5A2Q9GZV4 153 aaKnown RBP10.79□□□□□ -0.68
CPSF1-210ENST00000532935 MANBALQ9NQG1 85 aa10.79□□□□□ -0.68
CPSF1-210ENST00000532935 KLF12Q9Y4X4 402 aa10.79□□□□□ -0.68
CPSF1-210ENST00000532935 TRGV1A0A0A0MS02 117 aa10.78□□□□□ -0.68
CPSF1-210ENST00000532935 SUMO1P63165 101 aaKnown RBP10.78□□□□□ -0.68
CPSF1-210ENST00000532935 CCL20P78556 96 aa10.78□□□□□ -0.68
CPSF1-210ENST00000532935 MUC21Q5SSG8 566 aa10.78□□□□□ -0.68
CPSF1-210ENST00000532935 UBE2DNLQ8IWF7 75 aa10.78□□□□□ -0.68
CPSF1-210ENST00000532935 TVP23CQ96ET8 276 aa10.78□□□□□ -0.68
CPSF1-210ENST00000532935 TMPRSS5Q9H3S3 457 aa10.78□□□□□ -0.68
CPSF1-210ENST00000532935 CARHSP1Q9Y2V2 147 aaKnown RBP10.78□□□□□ -0.68
CPSF1-210ENST00000532935 A0A1W2PRE2 83 aa10.77□□□□□ -0.69
CPSF1-210ENST00000532935 F6UZH7 168 aa10.77□□□□□ -0.69
CPSF1-210ENST00000532935 K7EQM0 130 aa10.77□□□□□ -0.69
CPSF1-210ENST00000532935 SPINK4O60575 86 aa10.77□□□□□ -0.69
CPSF1-210ENST00000532935 BCL2P10415 239 aa10.77□□□□□ -0.69
CPSF1-210ENST00000532935 FGF8P55075 233 aaPredicted RBP10.77□□□□□ -0.69
CPSF1-210ENST00000532935 ZNF415Q09FC8 603 aa10.77□□□□□ -0.69
CPSF1-210ENST00000532935 OR5I1Q13606 314 aa10.77□□□□□ -0.69
CPSF1-210ENST00000532935 SGK494Q96LW2 274 aa10.77□□□□□ -0.69
CPSF1-210ENST00000532935 VAX2Q9UIW0 290 aa10.77□□□□□ -0.69
CPSF1-210ENST00000532935 EPDR1Q9UM22 224 aa10.77□□□□□ -0.69
CPSF1-210ENST00000532935 ARL2-SNX15V9GYD0 113 aa10.77□□□□□ -0.69
CPSF1-210ENST00000532935 DNAH17Q9UFH2 4485 aa10.76□□□□□ -0.69
CPSF1-210ENST00000532935 TRGV2A0A075B6R0 118 aa10.76□□□□□ -0.69
CPSF1-210ENST00000532935 NUDT3O95989 172 aa10.76□□□□□ -0.69
CPSF1-210ENST00000532935 HOXA5P20719 270 aa10.76□□□□□ -0.69
CPSF1-210ENST00000532935 SRSF3P84103 164 aaKnown RBP10.76□□□□□ -0.69
CPSF1-210ENST00000532935 RNF212Q495C1 297 aa10.76□□□□□ -0.69
CPSF1-210ENST00000532935 FAM159AQ6UWV7 190 aa10.76□□□□□ -0.69
CPSF1-210ENST00000532935 C18orf15Q96N68 181 aa10.76□□□□□ -0.69
CPSF1-210ENST00000532935 NDFIP1Q9BT67 221 aa10.76□□□□□ -0.69
CPSF1-210ENST00000532935 TRAV26-1A0A087WT03 109 aa10.75□□□□□ -0.69
CPSF1-210ENST00000532935 TRAV21A0A0B4J279 112 aa10.75□□□□□ -0.69
CPSF1-210ENST00000532935 F8W036 122 aa10.75□□□□□ -0.69
CPSF1-210ENST00000532935 UBE2G2P60604 165 aa10.75□□□□□ -0.69
CPSF1-210ENST00000532935 TMEM183BQ1AE95 376 aa10.75□□□□□ -0.69
CPSF1-210ENST00000532935 LGALS9BQ3B8N2 356 aa10.75□□□□□ -0.69
CPSF1-210ENST00000532935 TMEM183AQ8IXX5 376 aa10.75□□□□□ -0.69
CPSF1-210ENST00000532935 CYB561D1Q8N8Q1 229 aa10.75□□□□□ -0.69
CPSF1-210ENST00000532935 ATG101Q9BSB4 218 aa10.75□□□□□ -0.69
CPSF1-210ENST00000532935 MDFICQ9P1T7 246 aa10.75□□□□□ -0.69
CPSF1-210ENST00000532935 GNG13Q9P2W3 67 aa10.75□□□□□ -0.69
CPSF1-210ENST00000532935 NAGKQ9UJ70 344 aa10.75□□□□□ -0.69
CPSF1-210ENST00000532935 PSG8Q9UQ74 426 aa10.75□□□□□ -0.69
CPSF1-210ENST00000532935 TRGV11A0A075B6L2 103 aa10.74□□□□□ -0.69
CPSF1-210ENST00000532935 IGLV2-11P01706 119 aa10.74□□□□□ -0.69
CPSF1-210ENST00000532935 SFTA3P0C7M3 94 aa10.74□□□□□ -0.69
CPSF1-210ENST00000532935 TDRG1Q3Y452 100 aa10.74□□□□□ -0.69
CPSF1-210ENST00000532935 SVBPQ8N300 66 aa10.74□□□□□ -0.69
CPSF1-210ENST00000532935 TMEM75Q8N9X5 138 aa10.74□□□□□ -0.69
CPSF1-210ENST00000532935 C8orf49Q96NF6 230 aa10.74□□□□□ -0.69
CPSF1-210ENST00000532935 MRPL16Q9NX20 251 aaKnown RBP10.74□□□□□ -0.69
CPSF1-210ENST00000532935 FAT2Q9NYQ8 4349 aa10.73□□□□□ -0.69
CPSF1-210ENST00000532935 A0A0J9YY99 117 aa10.73□□□□□ -0.69
CPSF1-210ENST00000532935 A0A1B0GV50 99 aa10.73□□□□□ -0.69
CPSF1-210ENST00000532935 FBLL1A6NHQ2 334 aaKnown RBP10.73□□□□□ -0.69
CPSF1-210ENST00000532935 FAM74A7A6NL05 159 aa10.73□□□□□ -0.69
CPSF1-210ENST00000532935 TMEM250H0YL14 139 aa10.73□□□□□ -0.69
CPSF1-210ENST00000532935 SRP19P09132 144 aaKnown RBP10.73□□□□□ -0.69
CPSF1-210ENST00000532935 FLI1Q01543 452 aaPredicted RBP10.73□□□□□ -0.69
CPSF1-210ENST00000532935 PRNTQ86SH4 94 aa10.73□□□□□ -0.69
CPSF1-210ENST00000532935 NKX6-2Q9C056 277 aaPredicted RBP10.73□□□□□ -0.69
CPSF1-210ENST00000532935 HECTD4Q9Y4D8 3996 aa10.73□□□□□ -0.69
CPSF1-210ENST00000532935 C9JQL5 133 aa10.72□□□□□ -0.69
CPSF1-210ENST00000532935 MEF2BQ02080 365 aaPredicted RBP10.72□□□□□ -0.69
CPSF1-210ENST00000532935 SOHLH1Q5JUK2 328 aa10.72□□□□□ -0.69
CPSF1-210ENST00000532935 LINC00479Q96M42 142 aa10.72□□□□□ -0.69
CPSF1-210ENST00000532935 SPXQ9BT56 116 aa10.72□□□□□ -0.69
CPSF1-210ENST00000532935 TRAV34A0A0B4J273 112 aa10.71□□□□□ -0.69
CPSF1-210ENST00000532935 H3BNG1 76 aa10.71□□□□□ -0.69
CPSF1-210ENST00000532935 M0R2N4 97 aa10.71□□□□□ -0.69
CPSF1-210ENST00000532935 PEX7O00628 323 aa10.71□□□□□ -0.69
CPSF1-210ENST00000532935 GNRH2O43555 120 aa10.71□□□□□ -0.69
CPSF1-210ENST00000532935 PDE6DO43924 150 aa10.71□□□□□ -0.69
CPSF1-210ENST00000532935 SNAPINO95295 136 aa10.71□□□□□ -0.69
CPSF1-210ENST00000532935 GCGP01275 180 aa10.71□□□□□ -0.69
CPSF1-210ENST00000532935 APOC3P02656 99 aa10.71□□□□□ -0.69
CPSF1-210ENST00000532935 ZNF80P51504 273 aaPredicted RBP10.71□□□□□ -0.69
CPSF1-210ENST00000532935 FAM3BP58499 235 aaPredicted RBP10.71□□□□□ -0.69
CPSF1-210ENST00000532935 FAM74A3Q4VXF1 159 aa10.71□□□□□ -0.69
CPSF1-210ENST00000532935 SMUG1Q53HV7 270 aa10.71□□□□□ -0.69
CPSF1-210ENST00000532935 KCNS1Q96KK3 526 aa10.71□□□□□ -0.69
CPSF1-210ENST00000532935 IGLV2-18A0A075B6J9 118 aa10.7□□□□□ -0.7
CPSF1-210ENST00000532935 IGHV3-16A0A0C4DH30 117 aa10.7□□□□□ -0.7
CPSF1-210ENST00000532935 IGHV3-53P01767 116 aa10.7□□□□□ -0.7
CPSF1-210ENST00000532935 TYMSP04818 313 aa10.7□□□□□ -0.7
CPSF1-210ENST00000532935 ADCYAP1P18509 176 aa10.7□□□□□ -0.7
CPSF1-210ENST00000532935 CCL18P55774 89 aa10.7□□□□□ -0.7
CPSF1-210ENST00000532935 SAPCD1Q5SSQ6 148 aa10.7□□□□□ -0.7
CPSF1-210ENST00000532935 HIST1H2BAQ96A08 127 aa10.7□□□□□ -0.7
CPSF1-210ENST00000532935 VSIG2Q96IQ7 327 aa10.7□□□□□ -0.7
CPSF1-210ENST00000532935 SDF2L1Q9HCN8 221 aa10.7□□□□□ -0.7
CPSF1-210ENST00000532935 PFN1P07737 140 aaKnown RBP10.69□□□□□ -0.7
CPSF1-210ENST00000532935 RASL10AQ92737 203 aa10.69□□□□□ -0.7
CPSF1-210ENST00000532935 C11orf21Q9P2W6 132 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms