RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 GTSCR1Q86UQ5 136 aa13.75□□□□□ -0.21
UBXN1-213ENST00000532904 SELENOKQ9Y6D0 94 aa13.75□□□□□ -0.21
UBXN1-213ENST00000532904 TRBV25-1A0A075B6N4 114 aa13.74□□□□□ -0.21
UBXN1-213ENST00000532904 IGHV3-66A0A0C4DH42 116 aa13.74□□□□□ -0.21
UBXN1-213ENST00000532904 ATP6V0E1O15342 81 aa13.74□□□□□ -0.21
UBXN1-213ENST00000532904 MSMBP08118 114 aa13.74□□□□□ -0.21
UBXN1-213ENST00000532904 SLC25A16P16260 332 aa13.74□□□□□ -0.21
UBXN1-213ENST00000532904 TMEM78Q5T7P6 136 aa13.74□□□□□ -0.21
UBXN1-213ENST00000532904 ZC2HC1BQ5TFG8 222 aa13.74□□□□□ -0.21
UBXN1-213ENST00000532904 CCDC140Q96MF4 163 aa13.74□□□□□ -0.21
UBXN1-213ENST00000532904 HIF1ANQ9NWT6 349 aa13.74□□□□□ -0.21
UBXN1-213ENST00000532904 IGHV4-4A0A075B6R2 117 aa13.73□□□□□ -0.21
UBXN1-213ENST00000532904 LAGE3Q14657 143 aa13.73□□□□□ -0.21
UBXN1-213ENST00000532904 ZNF462Q96JM2 2506 aa13.73□□□□□ -0.21
UBXN1-213ENST00000532904 ZFYVE26Q68DK2 2539 aa13.73□□□□□ -0.21
UBXN1-213ENST00000532904 CLEC19AQ6UXS0 136 aa13.73□□□□□ -0.21
UBXN1-213ENST00000532904 MYOZ3Q8TDC0 251 aa13.73□□□□□ -0.21
UBXN1-213ENST00000532904 PHLDA1Q8WV24 401 aaPredicted RBP13.73□□□□□ -0.21
UBXN1-213ENST00000532904 TM2D2Q9BX73 214 aa13.73□□□□□ -0.21
UBXN1-213ENST00000532904 B4DSR2 109 aa13.72□□□□□ -0.21
UBXN1-213ENST00000532904 GATA3P23771 443 aa13.72□□□□□ -0.21
UBXN1-213ENST00000532904 C9orf47Q6ZRZ4 202 aa13.72□□□□□ -0.21
UBXN1-213ENST00000532904 C5orf56Q8N8D9 126 aa13.72□□□□□ -0.21
UBXN1-213ENST00000532904 TRAV40A0A0B4J280 105 aa13.71□□□□□ -0.21
UBXN1-213ENST00000532904 C8orf86Q6ZUL3 223 aa13.71□□□□□ -0.21
UBXN1-213ENST00000532904 CEND1Q8N111 149 aa13.71□□□□□ -0.21
UBXN1-213ENST00000532904 MRPL35Q9NZE8 188 aaKnown RBP13.71□□□□□ -0.21
UBXN1-213ENST00000532904 COL12A1Q99715 3063 aa13.71□□□□□ -0.21
UBXN1-213ENST00000532904 EEF1AKMT3Q96AZ1 226 aa13.71□□□□□ -0.21
UBXN1-213ENST00000532904 METTL26Q96S19 204 aa13.71□□□□□ -0.21
UBXN1-213ENST00000532904 TMEM160Q9NX00 188 aa13.71□□□□□ -0.21
UBXN1-213ENST00000532904 MOB4Q9Y3A3 225 aa13.71□□□□□ -0.21
UBXN1-213ENST00000532904 SPG11Q96JI7 2443 aa13.7□□□□□ -0.22
UBXN1-213ENST00000532904 IGHV3OR16-13A0A075B7E8 117 aa13.7□□□□□ -0.22
UBXN1-213ENST00000532904 A0A087WX48 190 aa13.7□□□□□ -0.22
UBXN1-213ENST00000532904 IGHV3-74A0A0B4J1X5 117 aa13.7□□□□□ -0.22
UBXN1-213ENST00000532904 RIPPLY3P57055 190 aa13.7□□□□□ -0.22
UBXN1-213ENST00000532904 U3KQE9 123 aa13.7□□□□□ -0.22
UBXN1-213ENST00000532904 TRBV7-1A0A0A6YYK4 115 aa13.7□□□□□ -0.22
UBXN1-213ENST00000532904 TRAV26-2A0A0B4J265 109 aa13.7□□□□□ -0.22
UBXN1-213ENST00000532904 UFC1Q9Y3C8 167 aa13.7□□□□□ -0.22
UBXN1-213ENST00000532904 CRIP2P52943 208 aaPredicted RBP13.69□□□□□ -0.22
UBXN1-213ENST00000532904 UBR5O95071 2799 aaPredicted RBP13.69□□□□□ -0.22
UBXN1-213ENST00000532904 G3V318 75 aa13.68□□□□□ -0.22
UBXN1-213ENST00000532904 K7ERJ3 54 aa13.68□□□□□ -0.22
UBXN1-213ENST00000532904 TAL2Q16559 108 aa13.68□□□□□ -0.22
UBXN1-213ENST00000532904 SPANXN1Q5VSR9 72 aa13.68□□□□□ -0.22
UBXN1-213ENST00000532904 MRAP2Q96G30 205 aa13.68□□□□□ -0.22
UBXN1-213ENST00000532904 IGHV3-49A0A0A0MS15 119 aa13.68□□□□□ -0.22
UBXN1-213ENST00000532904 BRD3OSQ6XYD6 125 aa13.68□□□□□ -0.22
UBXN1-213ENST00000532904 MAPKAPK5-AS1Q8N8E1 139 aa13.68□□□□□ -0.22
UBXN1-213ENST00000532904 NRGNQ92686 78 aa13.68□□□□□ -0.22
UBXN1-213ENST00000532904 IGHV3OR16-10A0A075B7F0 116 aa13.67□□□□□ -0.22
UBXN1-213ENST00000532904 LINC01548A6NM66 108 aa13.67□□□□□ -0.22
UBXN1-213ENST00000532904 ZNF207O43670 478 aaKnown RBP13.67□□□□□ -0.22
UBXN1-213ENST00000532904 IGHV4-38-2P0DP08 117 aa13.67□□□□□ -0.22
UBXN1-213ENST00000532904 PLNP26678 52 aa13.67□□□□□ -0.22
UBXN1-213ENST00000532904 Q6ZQT7 251 aa13.67□□□□□ -0.22
UBXN1-213ENST00000532904 NHP2Q9NX24 153 aaKnown RBP13.67□□□□□ -0.22
UBXN1-213ENST00000532904 A0A096LNT2 108 aa13.67□□□□□ -0.22
UBXN1-213ENST00000532904 ASH1LQ9NR48 2969 aaKnown RBP13.66□□□□□ -0.22
UBXN1-213ENST00000532904 LENEPQ9Y5L5 61 aa13.66□□□□□ -0.22
UBXN1-213ENST00000532904 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.66□□□□□ -0.222e-6■■■□□ 17.7
UBXN1-213ENST00000532904 TRAV12-1A0A0B4J245 112 aa13.65□□□□□ -0.22
UBXN1-213ENST00000532904 E9PLD3 99 aa13.65□□□□□ -0.22
UBXN1-213ENST00000532904 C19orf54Q5BKX5 351 aa13.65□□□□□ -0.22
UBXN1-213ENST00000532904 ATP6V0BQ99437 205 aa13.65□□□□□ -0.22
UBXN1-213ENST00000532904 SMIM2Q9BVW6 85 aa13.65□□□□□ -0.22
UBXN1-213ENST00000532904 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.65□□□□□ -0.22
UBXN1-213ENST00000532904 H3BVH4 76 aa13.65□□□□□ -0.22
UBXN1-213ENST00000532904 PRR9Q5T870 116 aa13.65□□□□□ -0.22
UBXN1-213ENST00000532904 LINC01356Q8N9X3 169 aa13.65□□□□□ -0.22
UBXN1-213ENST00000532904 FAM208BQ5VWN6 2430 aa13.64□□□□□ -0.23
UBXN1-213ENST00000532904 H7C1H1 209 aa13.64□□□□□ -0.23
UBXN1-213ENST00000532904 TMEM219Q86XT9 240 aa13.64□□□□□ -0.23
UBXN1-213ENST00000532904 C16orf92Q96LL3 132 aa13.64□□□□□ -0.23
UBXN1-213ENST00000532904 A6NDX4 124 aa13.63□□□□□ -0.23
UBXN1-213ENST00000532904 IGLL5B9A064 214 aa13.63□□□□□ -0.23
UBXN1-213ENST00000532904 J3QLI3 93 aa13.63□□□□□ -0.23
UBXN1-213ENST00000532904 ATP5G2Q06055 141 aa13.63□□□□□ -0.23
UBXN1-213ENST00000532904 C9orf139Q6ZV77 190 aa13.63□□□□□ -0.23
UBXN1-213ENST00000532904 F8VRH5 84 aa13.63□□□□□ -0.23
UBXN1-213ENST00000532904 GLMPQ8WWB7 406 aa13.63□□□□□ -0.23
UBXN1-213ENST00000532904 BEX4Q9NWD9 120 aaPredicted RBP13.63□□□□□ -0.23
UBXN1-213ENST00000532904 EPG5Q9HCE0 2579 aa13.62□□□□□ -0.23
UBXN1-213ENST00000532904 LINC01619G3V211 115 aa13.62□□□□□ -0.23
UBXN1-213ENST00000532904 ORMDL2Q53FV1 153 aa13.62□□□□□ -0.23
UBXN1-213ENST00000532904 C20orf173Q96LM9 149 aa13.62□□□□□ -0.23
UBXN1-213ENST00000532904 LRRK2Q5S007 2527 aa13.62□□□□□ -0.23
UBXN1-213ENST00000532904 TRAV41A0A0B4J266 112 aa13.62□□□□□ -0.23
UBXN1-213ENST00000532904 BRI3O95415 125 aa13.62□□□□□ -0.23
UBXN1-213ENST00000532904 IGF1P05019 195 aa13.62□□□□□ -0.23
UBXN1-213ENST00000532904 C12orf74Q32Q52 190 aa13.62□□□□□ -0.23
UBXN1-213ENST00000532904 TOMM6Q96B49 74 aa13.62□□□□□ -0.23
UBXN1-213ENST00000532904 FOXI2Q6ZQN5 318 aa13.61□□□□□ -0.23
UBXN1-213ENST00000532904 LRRC75A-AS1Q8N1F1 130 aa13.61□□□□□ -0.23
UBXN1-213ENST00000532904 LINC00477Q96M19 166 aa13.61□□□□□ -0.23
UBXN1-213ENST00000532904 C20orf78Q9BR46 151 aa13.61□□□□□ -0.23
UBXN1-213ENST00000532904 TEX48A0A1B0GUV7 120 aa13.6□□□□□ -0.23
UBXN1-213ENST00000532904 FAM223BA6NKX1 122 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms