RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 AVPP01185 164 aa11.31□□□□□ -0.6
SSH3-210ENST00000532881 C10orf99Q6UWK7 81 aa11.31□□□□□ -0.6
SSH3-210ENST00000532881 ARL6IP6Q8N6S5 226 aa11.31□□□□□ -0.6
SSH3-210ENST00000532881 IGHV4-30-2A0A087WSY4 118 aa11.3□□□□□ -0.6
SSH3-210ENST00000532881 A1L4Q6 167 aa11.3□□□□□ -0.6
SSH3-210ENST00000532881 H3BUT2 72 aa11.3□□□□□ -0.6
SSH3-210ENST00000532881 SMIM17P0DL12 118 aa11.3□□□□□ -0.6
SSH3-210ENST00000532881 ADAMTSL5Q6ZMM2 481 aa11.3□□□□□ -0.6
SSH3-210ENST00000532881 C9orf47Q6ZRZ4 202 aa11.3□□□□□ -0.6
SSH3-210ENST00000532881 RPL39LQ96EH5 51 aaKnown RBP11.3□□□□□ -0.6
SSH3-210ENST00000532881 ZFYVE26Q68DK2 2539 aa11.3□□□□□ -0.6
SSH3-210ENST00000532881 MXRA5Q9NR99 2828 aa11.3□□□□□ -0.6
SSH3-210ENST00000532881 TMEM8BA6NDV4 472 aa11.3□□□□□ -0.6
SSH3-210ENST00000532881 RAB9AP51151 201 aa11.3□□□□□ -0.6
SSH3-210ENST00000532881 C19orf54Q5BKX5 351 aa11.3□□□□□ -0.6
SSH3-210ENST00000532881 C14orf178Q8N769 122 aaPredicted RBP11.3□□□□□ -0.6
SSH3-210ENST00000532881 RNASE4P34096 147 aaKnown RBP11.29□□□□□ -0.6
SSH3-210ENST00000532881 TMEM190Q8WZ59 177 aa11.29□□□□□ -0.6
SSH3-210ENST00000532881 SFTPCP11686 197 aa11.29□□□□□ -0.6
SSH3-210ENST00000532881 SRSF2Q01130 221 aaKnown RBP11.29□□□□□ -0.6
SSH3-210ENST00000532881 ZC2HC1BQ5TFG8 222 aa11.29□□□□□ -0.6
SSH3-210ENST00000532881 NEGR1Q7Z3B1 354 aa11.29□□□□□ -0.6
SSH3-210ENST00000532881 MAPK1IP1LQ8NDC0 245 aa11.29□□□□□ -0.6
SSH3-210ENST00000532881 HIF1ANQ9NWT6 349 aa11.29□□□□□ -0.6
SSH3-210ENST00000532881 MRPL35Q9NZE8 188 aaKnown RBP11.29□□□□□ -0.6
SSH3-210ENST00000532881 PPBPP02775 128 aa11.28□□□□□ -0.6
SSH3-210ENST00000532881 ZFAND2AQ8N6M9 145 aa11.28□□□□□ -0.6
SSH3-210ENST00000532881 NXT2Q9NPJ8 142 aaKnown RBP11.28□□□□□ -0.6
SSH3-210ENST00000532881 Q8N8P6 123 aa11.28□□□□□ -0.6
SSH3-210ENST00000532881 K7ERJ3 54 aa11.27□□□□□ -0.6
SSH3-210ENST00000532881 KLK9Q2XQG4 91 aa11.27□□□□□ -0.6
SSH3-210ENST00000532881 ANXA2RQ3ZCQ2 193 aa11.27□□□□□ -0.6
SSH3-210ENST00000532881 OR4X2Q8NGF9 303 aa11.27□□□□□ -0.6
SSH3-210ENST00000532881 KLK9Q9UKQ9 250 aa11.27□□□□□ -0.6
SSH3-210ENST00000532881 CACNA1AO00555 2505 aa11.27□□□□□ -0.61
SSH3-210ENST00000532881 GCSHP23434 173 aa11.27□□□□□ -0.61
SSH3-210ENST00000532881 S100A7P31151 101 aa11.27□□□□□ -0.61
SSH3-210ENST00000532881 PCP4P48539 62 aa11.27□□□□□ -0.61
SSH3-210ENST00000532881 MAPKAPK5-AS1Q8N8E1 139 aa11.27□□□□□ -0.61
SSH3-210ENST00000532881 OR1N2Q8NGR9 330 aa11.27□□□□□ -0.61
SSH3-210ENST00000532881 CCL19Q99731 98 aa11.27□□□□□ -0.61
SSH3-210ENST00000532881 GAGE12BA1L429 117 aa11.26□□□□□ -0.61
SSH3-210ENST00000532881 IGKCP01834 107 aa11.26□□□□□ -0.61
SSH3-210ENST00000532881 FXYD2P54710 66 aa11.26□□□□□ -0.61
SSH3-210ENST00000532881 JPT2Q9H910 190 aa11.26□□□□□ -0.61
SSH3-210ENST00000532881 AGRNO00468 2067 aa11.26□□□□□ -0.61
SSH3-210ENST00000532881 MGPP08493 103 aa11.26□□□□□ -0.61
SSH3-210ENST00000532881 S100A4P26447 101 aaKnown RBP11.26□□□□□ -0.61
SSH3-210ENST00000532881 ATP5J2P56134 94 aa11.26□□□□□ -0.61
SSH3-210ENST00000532881 CST9LQ9H4G1 147 aa11.26□□□□□ -0.61
SSH3-210ENST00000532881 MUC4Q99102 2169 aa11.26□□□□□ -0.61
SSH3-210ENST00000532881 SMIM15Q7Z3B0 74 aa11.25□□□□□ -0.61
SSH3-210ENST00000532881 PRORYQ9H606 182 aa11.25□□□□□ -0.61
SSH3-210ENST00000532881 PEF1Q9UBV8 284 aaKnown RBP11.25□□□□□ -0.61
SSH3-210ENST00000532881 FAM223BA6NKX1 122 aa11.25□□□□□ -0.61
SSH3-210ENST00000532881 SOCS3O14543 225 aa11.25□□□□□ -0.61
SSH3-210ENST00000532881 IGKV3-20P01619 116 aa11.25□□□□□ -0.61
SSH3-210ENST00000532881 LAGE3Q14657 143 aa11.25□□□□□ -0.61
SSH3-210ENST00000532881 FAM223AQ8IWN6 122 aa11.25□□□□□ -0.61
SSH3-210ENST00000532881 RHPN1-AS1Q9BWJ2 59 aa11.25□□□□□ -0.61
SSH3-210ENST00000532881 CBY1Q9Y3M2 126 aa11.25□□□□□ -0.61
SSH3-210ENST00000532881 ZNF469Q96JG9 3925 aaPredicted RBP11.25□□□□□ -0.61
SSH3-210ENST00000532881 LINC01546A6NGU7 62 aa11.24□□□□□ -0.61
SSH3-210ENST00000532881 ZMAT4Q9H898 229 aa11.24□□□□□ -0.61
SSH3-210ENST00000532881 PPP1R14DQ9NXH3 145 aa11.24□□□□□ -0.61
SSH3-210ENST00000532881 FAM208BQ5VWN6 2430 aa11.24□□□□□ -0.61
SSH3-210ENST00000532881 GAGE10A6NGK3 116 aa11.24□□□□□ -0.61
SSH3-210ENST00000532881 SAP30O75446 220 aa11.24□□□□□ -0.61
SSH3-210ENST00000532881 C9orf139Q6ZV77 190 aa11.24□□□□□ -0.61
SSH3-210ENST00000532881 OR10J6PQ8NGY7 276 aa11.24□□□□□ -0.61
SSH3-210ENST00000532881 C10orf105Q8TEF2 133 aa11.24□□□□□ -0.61
SSH3-210ENST00000532881 RASL10AQ92737 203 aa11.24□□□□□ -0.61
SSH3-210ENST00000532881 DPF1Q92782 380 aa11.24□□□□□ -0.61
SSH3-210ENST00000532881 PIMREGQ9BSJ6 248 aa11.24□□□□□ -0.61
SSH3-210ENST00000532881 NPFFR1Q9GZQ6 430 aa11.24□□□□□ -0.61
SSH3-210ENST00000532881 CREBBPQ92793 2442 aa11.23□□□□□ -0.61
SSH3-210ENST00000532881 A0A0G2JLM5 398 aa11.23□□□□□ -0.61
SSH3-210ENST00000532881 SEC11AP67812 179 aa11.23□□□□□ -0.61
SSH3-210ENST00000532881 HSD52Q0P140 79 aa11.23□□□□□ -0.61
SSH3-210ENST00000532881 PHLDA3Q9Y5J5 127 aa11.23□□□□□ -0.61
SSH3-210ENST00000532881 TRBV25-1A0A075B6N4 114 aa11.23□□□□□ -0.61
SSH3-210ENST00000532881 IGHG2P01859 326 aa11.23□□□□□ -0.61
SSH3-210ENST00000532881 MYOZ3Q8TDC0 251 aa11.23□□□□□ -0.61
SSH3-210ENST00000532881 DOPEY1Q5JWR5 2465 aa11.22□□□□□ -0.61
SSH3-210ENST00000532881 C9orf118A6NHY6 69 aa11.22□□□□□ -0.61
SSH3-210ENST00000532881 NDUFA4O00483 81 aa11.22□□□□□ -0.61
SSH3-210ENST00000532881 DPM2O94777 84 aa11.22□□□□□ -0.61
SSH3-210ENST00000532881 HIST2H2BDQ6DRA6 164 aa11.22□□□□□ -0.61
SSH3-210ENST00000532881 OR9G4Q8NGQ1 327 aa11.22□□□□□ -0.61
SSH3-210ENST00000532881 MRPL53Q96EL3 112 aaKnown RBP11.22□□□□□ -0.61
SSH3-210ENST00000532881 MEGF9Q9H1U4 602 aa11.22□□□□□ -0.61
SSH3-210ENST00000532881 RNASE3P12724 160 aaKnown RBP11.22□□□□□ -0.61
SSH3-210ENST00000532881 AP1S3Q96PC3 154 aa11.22□□□□□ -0.61
SSH3-210ENST00000532881 CHAC1Q9BUX1 264 aa11.22□□□□□ -0.61
SSH3-210ENST00000532881 ACACBO00763 2458 aa11.21□□□□□ -0.61
SSH3-210ENST00000532881 A6NDX4 124 aa11.21□□□□□ -0.61
SSH3-210ENST00000532881 EMP1P54849 157 aa11.21□□□□□ -0.61
SSH3-210ENST00000532881 OCIAD2Q56VL3 154 aa11.21□□□□□ -0.61
SSH3-210ENST00000532881 DUX5Q96PT3 197 aa11.21□□□□□ -0.61
SSH3-210ENST00000532881 TRAV12-2A0A075B6T6 113 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms