RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 SPINK4O60575 86 aa12.32□□□□□ -0.44
SMG1-203ENST00000532700 IFNA7P01567 189 aa12.32□□□□□ -0.44
SMG1-203ENST00000532700 TCL1AP56279 114 aa12.32□□□□□ -0.44
SMG1-203ENST00000532700 TNP2Q05952 138 aa12.32□□□□□ -0.44
SMG1-203ENST00000532700 ESRGQ1W209 222 aa12.32□□□□□ -0.44
SMG1-203ENST00000532700 MUC21Q5SSG8 566 aa12.32□□□□□ -0.44
SMG1-203ENST00000532700 C1orf134Q5TEV5 83 aa12.32□□□□□ -0.44
SMG1-203ENST00000532700 IGHV1OR15-1A0A075B7D0 117 aa12.31□□□□□ -0.44
SMG1-203ENST00000532700 FBLL1A6NHQ2 334 aaKnown RBP12.31□□□□□ -0.44
SMG1-203ENST00000532700 FAM74A7A6NL05 159 aa12.31□□□□□ -0.44
SMG1-203ENST00000532700 PPT1P50897 306 aa12.31□□□□□ -0.44
SMG1-203ENST00000532700 FAM3BP58499 235 aaPredicted RBP12.31□□□□□ -0.44
SMG1-203ENST00000532700 CYB561D1Q8N8Q1 229 aa12.31□□□□□ -0.44
SMG1-203ENST00000532700 ZNF680Q8NEM1 530 aa12.31□□□□□ -0.44
SMG1-203ENST00000532700 ARL2-SNX15V9GYD0 113 aa12.31□□□□□ -0.44
SMG1-203ENST00000532700 TEX46H3BTG2 121 aa12.3□□□□□ -0.44
SMG1-203ENST00000532700 IGHV3-53P01767 116 aa12.3□□□□□ -0.44
SMG1-203ENST00000532700 SULT1A2P50226 295 aa12.3□□□□□ -0.44
SMG1-203ENST00000532700 TVP23CQ96ET8 276 aa12.3□□□□□ -0.44
SMG1-203ENST00000532700 NDFIP1Q9BT67 221 aa12.3□□□□□ -0.44
SMG1-203ENST00000532700 MDFICQ9P1T7 246 aa12.3□□□□□ -0.44
SMG1-203ENST00000532700 MUC4Q99102 2169 aa12.3□□□□□ -0.44
SMG1-203ENST00000532700 A0A096LPF7 62 aa12.29□□□□□ -0.44
SMG1-203ENST00000532700 TRAV8-1A0A0A6YYK1 113 aa12.29□□□□□ -0.44
SMG1-203ENST00000532700 RGS13O14921 159 aa12.29□□□□□ -0.44
SMG1-203ENST00000532700 CCL18P55774 89 aa12.29□□□□□ -0.44
SMG1-203ENST00000532700 CST9LP1Q5W188 147 aa12.29□□□□□ -0.44
SMG1-203ENST00000532700 HIST1H2BAQ96A08 127 aa12.29□□□□□ -0.44
SMG1-203ENST00000532700 C18orf15Q96N68 181 aa12.29□□□□□ -0.44
SMG1-203ENST00000532700 TCEAL7Q9BRU2 100 aa12.29□□□□□ -0.44
SMG1-203ENST00000532700 TRGV2A0A075B6R0 118 aa12.28□□□□□ -0.44
SMG1-203ENST00000532700 A0A1B0GV50 99 aa12.28□□□□□ -0.44
SMG1-203ENST00000532700 F6UZH7 168 aa12.28□□□□□ -0.44
SMG1-203ENST00000532700 IBA57Q5T440 356 aaKnown RBP12.28□□□□□ -0.44
SMG1-203ENST00000532700 TMEM75Q8N9X5 138 aa12.28□□□□□ -0.44
SMG1-203ENST00000532700 TREM1Q9NP99 234 aa12.28□□□□□ -0.44
SMG1-203ENST00000532700 PSG8Q9UQ74 426 aa12.28□□□□□ -0.44
SMG1-203ENST00000532700 TRAV1-1A0A0B4J248 108 aa12.27□□□□□ -0.45
SMG1-203ENST00000532700 PEX7O00628 323 aa12.27□□□□□ -0.45
SMG1-203ENST00000532700 FLI1Q01543 452 aaPredicted RBP12.27□□□□□ -0.45
SMG1-203ENST00000532700 SGK494Q96LW2 274 aa12.27□□□□□ -0.45
SMG1-203ENST00000532700 Q9H8V8 135 aa12.27□□□□□ -0.45
SMG1-203ENST00000532700 H3BNG1 76 aa12.26□□□□□ -0.45
SMG1-203ENST00000532700 PAGE4O60829 102 aa12.26□□□□□ -0.45
SMG1-203ENST00000532700 NKX2-5P52952 324 aaPredicted RBP12.26□□□□□ -0.45
SMG1-203ENST00000532700 SAPCD1Q5SSQ6 148 aa12.26□□□□□ -0.45
SMG1-203ENST00000532700 Q6AWC8 147 aa12.26□□□□□ -0.45
SMG1-203ENST00000532700 PRNTQ86SH4 94 aa12.26□□□□□ -0.45
SMG1-203ENST00000532700 C6orf223Q8N319 242 aa12.26□□□□□ -0.45
SMG1-203ENST00000532700 IGLV2-11P01706 119 aa12.25□□□□□ -0.45
SMG1-203ENST00000532700 FHL2Q14192 279 aa12.25□□□□□ -0.45
SMG1-203ENST00000532700 MRPS16Q9Y3D3 137 aaKnown RBP12.25□□□□□ -0.45
SMG1-203ENST00000532700 TRAV21A0A0B4J279 112 aa12.24□□□□□ -0.45
SMG1-203ENST00000532700 SFTA3P0C7M3 94 aa12.24□□□□□ -0.45
SMG1-203ENST00000532700 TMEM183BQ1AE95 376 aa12.24□□□□□ -0.45
SMG1-203ENST00000532700 TMEM183AQ8IXX5 376 aa12.24□□□□□ -0.45
SMG1-203ENST00000532700 UPK3BQ9BT76 320 aa12.24□□□□□ -0.45
SMG1-203ENST00000532700 MANBALQ9NQG1 85 aa12.24□□□□□ -0.45
SMG1-203ENST00000532700 PCLOQ9Y6V0 5065 aa12.24□□□□□ -0.45
SMG1-203ENST00000532700 GNRH2O43555 120 aa12.23□□□□□ -0.45
SMG1-203ENST00000532700 ZNF415Q09FC8 603 aa12.23□□□□□ -0.45
SMG1-203ENST00000532700 SMUG1Q53HV7 270 aa12.23□□□□□ -0.45
SMG1-203ENST00000532700 FAM159AQ6UWV7 190 aa12.23□□□□□ -0.45
SMG1-203ENST00000532700 FMC1Q96HJ9 113 aa12.23□□□□□ -0.45
SMG1-203ENST00000532700 ZNF479Q96JC4 524 aa12.23□□□□□ -0.45
SMG1-203ENST00000532700 LINC00479Q96M42 142 aa12.23□□□□□ -0.45
SMG1-203ENST00000532700 C8orf49Q96NF6 230 aa12.23□□□□□ -0.45
SMG1-203ENST00000532700 TRAV34A0A0B4J273 112 aa12.22□□□□□ -0.45
SMG1-203ENST00000532700 UBE2G1P62253 170 aa12.22□□□□□ -0.45
SMG1-203ENST00000532700 CCL20P78556 96 aa12.22□□□□□ -0.45
SMG1-203ENST00000532700 SOHLH1Q5JUK2 328 aa12.22□□□□□ -0.45
SMG1-203ENST00000532700 ALKAL2Q6UX46 152 aa12.22□□□□□ -0.45
SMG1-203ENST00000532700 GNG13Q9P2W3 67 aa12.22□□□□□ -0.45
SMG1-203ENST00000532700 C11orf21Q9P2W6 132 aa12.22□□□□□ -0.45
SMG1-203ENST00000532700 NAGKQ9UJ70 344 aa12.22□□□□□ -0.45
SMG1-203ENST00000532700 RYR1P21817 5038 aa12.21□□□□□ -0.45
SMG1-203ENST00000532700 IFNA1P01562 189 aa12.21□□□□□ -0.45
SMG1-203ENST00000532700 S100A9P06702 114 aaKnown RBP12.21□□□□□ -0.45
SMG1-203ENST00000532700 AKR1C3P42330 323 aa12.21□□□□□ -0.45
SMG1-203ENST00000532700 ZNF80P51504 273 aaPredicted RBP12.21□□□□□ -0.45
SMG1-203ENST00000532700 CRYBA4P53673 196 aa12.21□□□□□ -0.45
SMG1-203ENST00000532700 BLOC1S1P78537 153 aa12.21□□□□□ -0.45
SMG1-203ENST00000532700 TXNDC17Q9BRA2 123 aa12.21□□□□□ -0.45
SMG1-203ENST00000532700 KRTAP4-5Q9BYR2 181 aa12.21□□□□□ -0.45
SMG1-203ENST00000532700 ZFP30Q9Y2G7 519 aa12.21□□□□□ -0.45
SMG1-203ENST00000532700 BOLA1Q9Y3E2 137 aa12.21□□□□□ -0.45
SMG1-203ENST00000532700 TRGV11A0A075B6L2 103 aa12.2□□□□□ -0.46
SMG1-203ENST00000532700 PAX4O43316 350 aa12.2□□□□□ -0.46
SMG1-203ENST00000532700 GCGP01275 180 aa12.2□□□□□ -0.46
SMG1-203ENST00000532700 MED14OSP0DP75 135 aa12.2□□□□□ -0.46
SMG1-203ENST00000532700 TDRG1Q3Y452 100 aa12.2□□□□□ -0.46
SMG1-203ENST00000532700 KCNS1Q96KK3 526 aa12.2□□□□□ -0.46
SMG1-203ENST00000532700 IGHV3-16A0A0C4DH30 117 aa12.19□□□□□ -0.46
SMG1-203ENST00000532700 TRBV6-1A0A0K0K1D8 114 aa12.19□□□□□ -0.46
SMG1-203ENST00000532700 TYMSP04818 313 aa12.19□□□□□ -0.46
SMG1-203ENST00000532700 PFN1P07737 140 aaKnown RBP12.19□□□□□ -0.46
SMG1-203ENST00000532700 Q86TA4 180 aa12.19□□□□□ -0.46
SMG1-203ENST00000532700 LOC100131303A0A0U1RQF7 123 aa12.18□□□□□ -0.46
SMG1-203ENST00000532700 SDF2L1Q9HCN8 221 aa12.18□□□□□ -0.46
SMG1-203ENST00000532700 PRO0255Q9UI72 69 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms