RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 GFRA4Q9GZZ7 299 aa6.92□□□□□ -1.3
CTNND1-232ENST00000532649 Q86TA4 180 aa6.92□□□□□ -1.3
CTNND1-232ENST00000532649 AMN1Q8IY45 258 aa6.92□□□□□ -1.3
CTNND1-232ENST00000532649 C14orf132Q9NPU4 83 aa6.92□□□□□ -1.3
CTNND1-232ENST00000532649 PDE6HQ13956 83 aa6.92□□□□□ -1.3
CTNND1-232ENST00000532649 ZC2HC1BQ5TFG8 222 aa6.92□□□□□ -1.3
CTNND1-232ENST00000532649 LINC01551Q86U37 167 aa6.92□□□□□ -1.3
CTNND1-232ENST00000532649 TM2D2Q9BX73 214 aa6.92□□□□□ -1.3
CTNND1-232ENST00000532649 VPREB3Q9UKI3 123 aa6.92□□□□□ -1.3
CTNND1-232ENST00000532649 TRAV12-2A0A075B6T6 113 aa6.91□□□□□ -1.3
CTNND1-232ENST00000532649 IGHV4-28A0A0C4DH34 117 aa6.91□□□□□ -1.3
CTNND1-232ENST00000532649 WISP2O76076 250 aa6.91□□□□□ -1.3
CTNND1-232ENST00000532649 WT1-ASQ06250 92 aa6.91□□□□□ -1.3
CTNND1-232ENST00000532649 MORN5Q5VZ52 161 aa6.91□□□□□ -1.3
CTNND1-232ENST00000532649 NDUFA4O00483 81 aa6.91□□□□□ -1.3
CTNND1-232ENST00000532649 IGHG2P01859 326 aa6.91□□□□□ -1.3
CTNND1-232ENST00000532649 HIST1H2BKO60814 126 aa6.91□□□□□ -1.3
CTNND1-232ENST00000532649 HIST1H2BJP06899 126 aa6.91□□□□□ -1.3
CTNND1-232ENST00000532649 HIST1H2BOP23527 126 aa6.91□□□□□ -1.3
CTNND1-232ENST00000532649 HIST1H2BBP33778 126 aa6.91□□□□□ -1.3
CTNND1-232ENST00000532649 HIST1H2BDP58876 126 aa6.91□□□□□ -1.3
CTNND1-232ENST00000532649 HIST1H2BCP62807 126 aa6.91□□□□□ -1.3
CTNND1-232ENST00000532649 HIST2H2BEQ16778 126 aa6.91□□□□□ -1.3
CTNND1-232ENST00000532649 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.91□□□□□ -1.3
CTNND1-232ENST00000532649 HIST1H2BHQ93079 126 aa6.91□□□□□ -1.3
CTNND1-232ENST00000532649 C8orf49Q96NF6 230 aa6.91□□□□□ -1.3
CTNND1-232ENST00000532649 CAMK2N2Q96S95 79 aa6.91□□□□□ -1.3
CTNND1-232ENST00000532649 HIST1H2BNQ99877 126 aa6.91□□□□□ -1.3
CTNND1-232ENST00000532649 HIST1H2BMQ99879 126 aa6.91□□□□□ -1.3
CTNND1-232ENST00000532649 HIST1H2BLQ99880 126 aa6.91□□□□□ -1.3
CTNND1-232ENST00000532649 ORMDL1Q9P0S3 153 aa6.91□□□□□ -1.3
CTNND1-232ENST00000532649 DENND4AQ7Z401 1863 aa6.91□□□□□ -1.3
CTNND1-232ENST00000532649 C1orf194Q5T5A4 169 aa6.91□□□□□ -1.3
CTNND1-232ENST00000532649 NOP10Q9NPE3 64 aaKnown RBP6.91□□□□□ -1.3
CTNND1-232ENST00000532649 ABCA1O95477 2261 aa6.9□□□□□ -1.3
CTNND1-232ENST00000532649 BOD1L2Q8IYS8 172 aa6.9□□□□□ -1.3
CTNND1-232ENST00000532649 Q8N8P6 123 aa6.9□□□□□ -1.3
CTNND1-232ENST00000532649 PRORYQ9H606 182 aa6.9□□□□□ -1.3
CTNND1-232ENST00000532649 MRPL27Q9P0M9 148 aaKnown RBP6.9□□□□□ -1.3
CTNND1-232ENST00000532649 A0A1B0GW64 132 aa6.9□□□□□ -1.3
CTNND1-232ENST00000532649 SH2D6Q7Z4S9 175 aa6.9□□□□□ -1.3
CTNND1-232ENST00000532649 IGFBPL1Q8WX77 278 aa6.9□□□□□ -1.3
CTNND1-232ENST00000532649 CFHR4Q92496 578 aa6.9□□□□□ -1.3
CTNND1-232ENST00000532649 FGF23Q9GZV9 251 aaPredicted RBP6.9□□□□□ -1.3
CTNND1-232ENST00000532649 MED13Q9UHV7 2174 aa6.9□□□□□ -1.3
CTNND1-232ENST00000532649 SYS1-DBNDD2H3BUS1 97 aa6.9□□□□□ -1.31
CTNND1-232ENST00000532649 IGHV4-38-2P0DP08 117 aa6.9□□□□□ -1.31
CTNND1-232ENST00000532649 SRSF2Q01130 221 aaKnown RBP6.9□□□□□ -1.31
CTNND1-232ENST00000532649 Q6ZWC4 215 aa6.9□□□□□ -1.31
CTNND1-232ENST00000532649 NDUFA12Q9UI09 145 aa6.9□□□□□ -1.31
CTNND1-232ENST00000532649 ELANEP08246 267 aa6.9□□□□□ -1.31
CTNND1-232ENST00000532649 HIST3H2BBQ8N257 126 aa6.9□□□□□ -1.31
CTNND1-232ENST00000532649 IGHV3-30P01768 117 aa6.89□□□□□ -1.31
CTNND1-232ENST00000532649 IGHV3-33P01772 117 aa6.89□□□□□ -1.31
CTNND1-232ENST00000532649 IGHV3-30-3P0DP02 117 aa6.89□□□□□ -1.31
CTNND1-232ENST00000532649 IGHV3-30-5P0DP03 117 aa6.89□□□□□ -1.31
CTNND1-232ENST00000532649 DAZAP2Q15038 168 aaPredicted RBP6.89□□□□□ -1.31
CTNND1-232ENST00000532649 LINC00479Q96M42 142 aa6.89□□□□□ -1.31
CTNND1-232ENST00000532649 KIAA1549LQ6ZVL6 1849 aa6.89□□□□□ -1.31
CTNND1-232ENST00000532649 C2orf66Q6UXQ4 117 aa6.89□□□□□ -1.31
CTNND1-232ENST00000532649 OR11H6Q8NGC7 330 aa6.89□□□□□ -1.31
CTNND1-232ENST00000532649 C10orf105Q8TEF2 133 aa6.89□□□□□ -1.31
CTNND1-232ENST00000532649 SS18L2Q9UHA2 77 aa6.89□□□□□ -1.31
CTNND1-232ENST00000532649 LY96Q9Y6Y9 160 aa6.89□□□□□ -1.31
CTNND1-232ENST00000532649 KRTAP27-1Q3LI81 207 aa6.89□□□□□ -1.31
CTNND1-232ENST00000532649 ANKRD29Q8N6D5 301 aa6.89□□□□□ -1.31
CTNND1-232ENST00000532649 TMEM131Q92545 1883 aa6.89□□□□□ -1.31
CTNND1-232ENST00000532649 PRSS46E5RG02 174 aa6.89□□□□□ -1.31
CTNND1-232ENST00000532649 BVES-AS1Q5T3Y7 98 aa6.89□□□□□ -1.31
CTNND1-232ENST00000532649 PPDPFLQ8WWR9 84 aa6.89□□□□□ -1.31
CTNND1-232ENST00000532649 B9D2Q9BPU9 175 aa6.89□□□□□ -1.31
CTNND1-232ENST00000532649 SDHAF1A6NFY7 115 aa6.88□□□□□ -1.31
CTNND1-232ENST00000532649 PROP1O75360 226 aa6.88□□□□□ -1.31
CTNND1-232ENST00000532649 SPART-AS1P0CW21 52 aa6.88□□□□□ -1.31
CTNND1-232ENST00000532649 C8orf86Q6ZUL3 223 aa6.88□□□□□ -1.31
CTNND1-232ENST00000532649 PIFOQ8TCI5 191 aa6.88□□□□□ -1.31
CTNND1-232ENST00000532649 MRPL23Q16540 153 aaKnown RBP6.88□□□□□ -1.31
CTNND1-232ENST00000532649 CARD19Q96LW7 228 aa6.88□□□□□ -1.31
CTNND1-232ENST00000532649 CUL9Q8IWT3 2517 aa6.88□□□□□ -1.31
CTNND1-232ENST00000532649 A0A1B0GX51 115 aa6.88□□□□□ -1.31
CTNND1-232ENST00000532649 PRB2P02812 416 aaPredicted RBP6.88□□□□□ -1.31
CTNND1-232ENST00000532649 CASC2Q6XLA1 102 aa6.88□□□□□ -1.31
CTNND1-232ENST00000532649 Q8NFD4 153 aa6.88□□□□□ -1.31
CTNND1-232ENST00000532649 H3BQ85 93 aa6.88□□□□□ -1.31
CTNND1-232ENST00000532649 CCL24O00175 119 aa6.88□□□□□ -1.31
CTNND1-232ENST00000532649 WIPF3A6NGB9 483 aa6.88□□□□□ -1.31
CTNND1-232ENST00000532649 FGF6P10767 208 aa6.88□□□□□ -1.31
CTNND1-232ENST00000532649 ARFGEF3Q5TH69 2177 aa6.87□□□□□ -1.31
CTNND1-232ENST00000532649 NOTCH3Q9UM47 2321 aa6.87□□□□□ -1.31
CTNND1-232ENST00000532649 TRBV19A0A075B6N1 114 aa6.87□□□□□ -1.31
CTNND1-232ENST00000532649 CENPVL3A0A0U1RRI6 287 aa6.87□□□□□ -1.31
CTNND1-232ENST00000532649 K7ERS5 55 aa6.87□□□□□ -1.31
CTNND1-232ENST00000532649 GP9P14770 177 aa6.87□□□□□ -1.31
CTNND1-232ENST00000532649 C16orf74Q96GX8 76 aa6.87□□□□□ -1.31
CTNND1-232ENST00000532649 CXCL1P09341 107 aa6.87□□□□□ -1.31
CTNND1-232ENST00000532649 FOXI2Q6ZQN5 318 aa6.87□□□□□ -1.31
CTNND1-232ENST00000532649 PCDH15Q96QU1 1955 aa6.87□□□□□ -1.31
CTNND1-232ENST00000532649 H3BRN7 92 aa6.87□□□□□ -1.31
CTNND1-232ENST00000532649 IGHV7-4-1A0A0J9YVY3 117 aa6.86□□□□□ -1.31
CTNND1-232ENST00000532649 ATP5G1P05496 136 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms