RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 G3V3Q6 166 aa11.91□□□□□ -0.5
PHRF1-204ENST00000532550 CRYBA4P53673 196 aa11.91□□□□□ -0.5
PHRF1-204ENST00000532550 IGHV3-16A0A0C4DH30 117 aa11.9□□□□□ -0.5
PHRF1-204ENST00000532550 FBLL1A6NHQ2 334 aaKnown RBP11.9□□□□□ -0.5
PHRF1-204ENST00000532550 M0R2P5 195 aa11.9□□□□□ -0.5
PHRF1-204ENST00000532550 FLI1Q01543 452 aaPredicted RBP11.9□□□□□ -0.5
PHRF1-204ENST00000532550 MRPL23Q16540 153 aaKnown RBP11.9□□□□□ -0.5
PHRF1-204ENST00000532550 ZFP69Q49AA0 526 aa11.9□□□□□ -0.5
PHRF1-204ENST00000532550 TTC32Q5I0X7 151 aa11.9□□□□□ -0.5
PHRF1-204ENST00000532550 PRNTQ86SH4 94 aa11.9□□□□□ -0.5
PHRF1-204ENST00000532550 CYB561D1Q8N8Q1 229 aa11.9□□□□□ -0.5
PHRF1-204ENST00000532550 GGTLC3B5MD39 225 aa11.89□□□□□ -0.51
PHRF1-204ENST00000532550 IFNA7P01567 189 aa11.89□□□□□ -0.51
PHRF1-204ENST00000532550 TYMSP04818 313 aa11.89□□□□□ -0.51
PHRF1-204ENST00000532550 SFTA3P0C7M3 94 aa11.89□□□□□ -0.51
PHRF1-204ENST00000532550 ZNF726P1Q15940 193 aa11.89□□□□□ -0.51
PHRF1-204ENST00000532550 SAPCD1Q5SSQ6 148 aa11.89□□□□□ -0.51
PHRF1-204ENST00000532550 ZNF479Q96JC4 524 aa11.89□□□□□ -0.51
PHRF1-204ENST00000532550 SMLR1H3BR10 107 aa11.88□□□□□ -0.51
PHRF1-204ENST00000532550 GCGP01275 180 aa11.88□□□□□ -0.51
PHRF1-204ENST00000532550 IGLV2-11P01706 119 aa11.88□□□□□ -0.51
PHRF1-204ENST00000532550 SMUG1Q53HV7 270 aa11.88□□□□□ -0.51
PHRF1-204ENST00000532550 TMEM75Q8N9X5 138 aa11.88□□□□□ -0.51
PHRF1-204ENST00000532550 OR4C5Q8NGB2 326 aa11.88□□□□□ -0.51
PHRF1-204ENST00000532550 NKX6-2Q9C056 277 aaPredicted RBP11.88□□□□□ -0.51
PHRF1-204ENST00000532550 CYTL1Q9NRR1 136 aa11.88□□□□□ -0.51
PHRF1-204ENST00000532550 PKD1P98161 4303 aa11.87□□□□□ -0.51
PHRF1-204ENST00000532550 TRAV4A0A0B4J268 109 aa11.87□□□□□ -0.51
PHRF1-204ENST00000532550 A0A1W2PPQ1 181 aa11.87□□□□□ -0.51
PHRF1-204ENST00000532550 PPT1P50897 306 aa11.87□□□□□ -0.51
PHRF1-204ENST00000532550 ZNF80P51504 273 aaPredicted RBP11.87□□□□□ -0.51
PHRF1-204ENST00000532550 FGF8P55075 233 aaPredicted RBP11.87□□□□□ -0.51
PHRF1-204ENST00000532550 UBE2G2P60604 165 aa11.87□□□□□ -0.51
PHRF1-204ENST00000532550 SIVA1O15304 175 aa11.86□□□□□ -0.51
PHRF1-204ENST00000532550 PFN1P07737 140 aaKnown RBP11.86□□□□□ -0.51
PHRF1-204ENST00000532550 TNP2Q05952 138 aa11.86□□□□□ -0.51
PHRF1-204ENST00000532550 NEGR1Q7Z3B1 354 aa11.86□□□□□ -0.51
PHRF1-204ENST00000532550 PCNPQ8WW12 178 aaKnown RBP11.86□□□□□ -0.51
PHRF1-204ENST00000532550 TRAV34A0A0B4J273 112 aa11.85□□□□□ -0.51
PHRF1-204ENST00000532550 C9JCJ5 164 aa11.85□□□□□ -0.51
PHRF1-204ENST00000532550 ORM1P02763 201 aa11.85□□□□□ -0.51
PHRF1-204ENST00000532550 SRIP30626 198 aa11.85□□□□□ -0.51
PHRF1-204ENST00000532550 LYPD5Q6UWN5 251 aa11.85□□□□□ -0.51
PHRF1-204ENST00000532550 STOML3Q8TAV4 291 aa11.85□□□□□ -0.51
PHRF1-204ENST00000532550 LINC00479Q96M42 142 aa11.85□□□□□ -0.51
PHRF1-204ENST00000532550 PKHD1P08F94 4074 aa11.84□□□□□ -0.51
PHRF1-204ENST00000532550 MAP1LC3B2A6NCE7 125 aa11.84□□□□□ -0.51
PHRF1-204ENST00000532550 FAM74A7A6NL05 159 aa11.84□□□□□ -0.51
PHRF1-204ENST00000532550 K7EQD1 137 aa11.84□□□□□ -0.51
PHRF1-204ENST00000532550 GYPEP15421 78 aa11.84□□□□□ -0.51
PHRF1-204ENST00000532550 ZNF876PQ49A33 203 aa11.84□□□□□ -0.51
PHRF1-204ENST00000532550 KCNRGQ8N5I3 272 aa11.84□□□□□ -0.51
PHRF1-204ENST00000532550 HIST1H2BAQ96A08 127 aa11.84□□□□□ -0.51
PHRF1-204ENST00000532550 KRTAP1-5Q9BYS1 174 aa11.84□□□□□ -0.51
PHRF1-204ENST00000532550 MAP1LC3BQ9GZQ8 125 aa11.84□□□□□ -0.51
PHRF1-204ENST00000532550 C11orf21Q9P2W6 132 aa11.84□□□□□ -0.51
PHRF1-204ENST00000532550 HMSDA8MTL9 139 aa11.83□□□□□ -0.52
PHRF1-204ENST00000532550 PEX7O00628 323 aa11.83□□□□□ -0.52
PHRF1-204ENST00000532550 NXPH4O95158 308 aa11.83□□□□□ -0.52
PHRF1-204ENST00000532550 MED14OSP0DP75 135 aa11.83□□□□□ -0.52
PHRF1-204ENST00000532550 BTF3P20290 206 aaKnown RBP11.83□□□□□ -0.52
PHRF1-204ENST00000532550 ZNF345Q14585 488 aa11.83□□□□□ -0.52
PHRF1-204ENST00000532550 A0A0D9SG52 128 aa11.82□□□□□ -0.52
PHRF1-204ENST00000532550 FABP5P3A8MUU1 101 aa11.82□□□□□ -0.52
PHRF1-204ENST00000532550 TXNDC17Q9BRA2 123 aa11.82□□□□□ -0.52
PHRF1-204ENST00000532550 ARL2-SNX15V9GYD0 113 aa11.82□□□□□ -0.52
PHRF1-204ENST00000532550 DNAH11Q96DT5 4516 aa11.82□□□□□ -0.52
PHRF1-204ENST00000532550 CIDEAO60543 219 aa11.81□□□□□ -0.52
PHRF1-204ENST00000532550 SEC11BP0C7V7 166 aa11.81□□□□□ -0.52
PHRF1-204ENST00000532550 OR11H4Q8NGC9 324 aa11.81□□□□□ -0.52
PHRF1-204ENST00000532550 KANTRA0A1W2PQU2 76 aa11.8□□□□□ -0.52
PHRF1-204ENST00000532550 S100A4P26447 101 aaKnown RBP11.8□□□□□ -0.52
PHRF1-204ENST00000532550 FHITP49789 147 aa11.8□□□□□ -0.52
PHRF1-204ENST00000532550 CST9LP1Q5W188 147 aa11.8□□□□□ -0.52
PHRF1-204ENST00000532550 C9orf85Q96MD7 179 aa11.8□□□□□ -0.52
PHRF1-204ENST00000532550 ZNF471Q9BX82 626 aaPredicted RBP11.8□□□□□ -0.52
PHRF1-204ENST00000532550 TRAV9-2A0A087WT02 112 aa11.79□□□□□ -0.52
PHRF1-204ENST00000532550 UMAD1C9J7I0 102 aa11.79□□□□□ -0.52
PHRF1-204ENST00000532550 RS1O15537 224 aa11.79□□□□□ -0.52
PHRF1-204ENST00000532550 GATA1P15976 413 aaPredicted RBP11.79□□□□□ -0.52
PHRF1-204ENST00000532550 UBE2G1P62253 170 aa11.79□□□□□ -0.52
PHRF1-204ENST00000532550 CFAP126Q5VTH2 177 aa11.79□□□□□ -0.52
PHRF1-204ENST00000532550 SH2D6Q7Z4S9 175 aa11.79□□□□□ -0.52
PHRF1-204ENST00000532550 ZNF575Q86XF7 245 aa11.79□□□□□ -0.52
PHRF1-204ENST00000532550 SFT2D1Q8WV19 159 aa11.79□□□□□ -0.52
PHRF1-204ENST00000532550 PTH2Q96A98 100 aa11.79□□□□□ -0.52
PHRF1-204ENST00000532550 ZFP30Q9Y2G7 519 aa11.79□□□□□ -0.52
PHRF1-204ENST00000532550 DYNC1H1Q14204 4646 aaKnown RBP11.79□□□□□ -0.52
PHRF1-204ENST00000532550 IGKV3D-20A0A0C4DH25 116 aa11.78□□□□□ -0.52
PHRF1-204ENST00000532550 PGPEP1LA6NFU8 196 aa11.78□□□□□ -0.52
PHRF1-204ENST00000532550 RNASE3P12724 160 aaKnown RBP11.78□□□□□ -0.52
PHRF1-204ENST00000532550 EIF5AP63241 154 aaKnown RBP11.78□□□□□ -0.52
PHRF1-204ENST00000532550 Q86TA4 180 aa11.78□□□□□ -0.52
PHRF1-204ENST00000532550 NHLRC2Q8NBF2 726 aa11.78□□□□□ -0.52
PHRF1-204ENST00000532550 FAM213BQ8TBF2 198 aa11.78□□□□□ -0.52
PHRF1-204ENST00000532550 FMC1Q96HJ9 113 aa11.78□□□□□ -0.52
PHRF1-204ENST00000532550 TCEAL7Q9BRU2 100 aa11.78□□□□□ -0.52
PHRF1-204ENST00000532550 LY96Q9Y6Y9 160 aa11.78□□□□□ -0.52
PHRF1-204ENST00000532550 KIAA1109Q2LD37 5005 aa11.78□□□□□ -0.52
PHRF1-204ENST00000532550 HERC2O95714 4834 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms