RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 PTPN13Q12923 2485 aa8.83□□□□□ -1
PTPRK-221ENST00000532331 WIPF3A6NGB9 483 aa8.83□□□□□ -1
PTPRK-221ENST00000532331 SPART-AS1P0CW21 52 aa8.83□□□□□ -1
PTPRK-221ENST00000532331 MSMPQ1L6U9 139 aa8.83□□□□□ -1
PTPRK-221ENST00000532331 IL17DQ8TAD2 202 aa8.83□□□□□ -1
PTPRK-221ENST00000532331 ARFGEF3Q5TH69 2177 aa8.83□□□□□ -1
PTPRK-221ENST00000532331 A0A096LPF7 62 aa8.83□□□□□ -1
PTPRK-221ENST00000532331 PMVKQ15126 192 aa8.83□□□□□ -1
PTPRK-221ENST00000532331 NOP10Q9NPE3 64 aaKnown RBP8.83□□□□□ -1
PTPRK-221ENST00000532331 V9GYV3 84 aa8.83□□□□□ -1
PTPRK-221ENST00000532331 A6NDX4 124 aa8.83□□□□□ -1
PTPRK-221ENST00000532331 A8MWP6 167 aa8.83□□□□□ -1
PTPRK-221ENST00000532331 LURAP1LQ8IV03 231 aa8.83□□□□□ -1
PTPRK-221ENST00000532331 IGHG2P01859 326 aa8.83□□□□□ -1
PTPRK-221ENST00000532331 PRR20EP86478 221 aa8.83□□□□□ -1
PTPRK-221ENST00000532331 PRR20CP86479 221 aa8.83□□□□□ -1
PTPRK-221ENST00000532331 PRR20DP86480 221 aa8.83□□□□□ -1
PTPRK-221ENST00000532331 PRR20BP86481 221 aa8.83□□□□□ -1
PTPRK-221ENST00000532331 PRR20AP86496 221 aa8.83□□□□□ -1
PTPRK-221ENST00000532331 NEGR1Q7Z3B1 354 aa8.83□□□□□ -1
PTPRK-221ENST00000532331 SMIM27A0A1W2PRY6 76 aa8.82□□□□□ -1
PTPRK-221ENST00000532331 SRSF2Q01130 221 aaKnown RBP8.82□□□□□ -1
PTPRK-221ENST00000532331 MPV17L2Q567V2 206 aa8.82□□□□□ -1
PTPRK-221ENST00000532331 ZC2HC1AQ96GY0 325 aa8.82□□□□□ -1
PTPRK-221ENST00000532331 NAA38Q9BRA0 125 aaKnown RBP8.82□□□□□ -1
PTPRK-221ENST00000532331 A0A0J9YY99 117 aa8.82□□□□□ -1
PTPRK-221ENST00000532331 PYY3Q5JQD4 70 aa8.82□□□□□ -1
PTPRK-221ENST00000532331 ZNF114Q8NC26 417 aa8.82□□□□□ -1
PTPRK-221ENST00000532331 CDK2AP2O75956 126 aa8.82□□□□□ -1
PTPRK-221ENST00000532331 KIAA1549LQ6ZVL6 1849 aa8.82□□□□□ -1
PTPRK-221ENST00000532331 CCL18P55774 89 aa8.82□□□□□ -1
PTPRK-221ENST00000532331 DLX4Q92988 240 aaPredicted RBP8.82□□□□□ -1
PTPRK-221ENST00000532331 C11orf52Q96A22 123 aa8.82□□□□□ -1
PTPRK-221ENST00000532331 C2orf82Q6UX34 121 aa8.82□□□□□ -1
PTPRK-221ENST00000532331 Q6YL49 198 aa8.82□□□□□ -1
PTPRK-221ENST00000532331 STPG4Q8N801 248 aa8.81□□□□□ -1
PTPRK-221ENST00000532331 TRAV26-2A0A0B4J265 109 aa8.81□□□□□ -1
PTPRK-221ENST00000532331 TRAV25A0A0B4J276 109 aa8.81□□□□□ -1
PTPRK-221ENST00000532331 GAGE6Q13070 117 aa8.81□□□□□ -1
PTPRK-221ENST00000532331 KIR3DS1Q14943 382 aa8.81□□□□□ -1
PTPRK-221ENST00000532331 RITA1Q96K30 269 aa8.81□□□□□ -1
PTPRK-221ENST00000532331 IGHV3-38A0A0C4DH36 116 aa8.8□□□□□ -1
PTPRK-221ENST00000532331 IGLV1-47P01700 117 aa8.8□□□□□ -1
PTPRK-221ENST00000532331 MRPL53Q96EL3 112 aaKnown RBP8.8□□□□□ -1
PTPRK-221ENST00000532331 ZNF625Q96I27 306 aaPredicted RBP8.8□□□□□ -1
PTPRK-221ENST00000532331 DNAJC30Q96LL9 226 aa8.8□□□□□ -1
PTPRK-221ENST00000532331 PYGO2Q9BRQ0 406 aa8.8□□□□□ -1
PTPRK-221ENST00000532331 CEP192Q8TEP8 1941 aa8.8□□□□□ -1
PTPRK-221ENST00000532331 IGLV2-23P01705 113 aa8.8□□□□□ -1
PTPRK-221ENST00000532331 KLF12Q9Y4X4 402 aa8.8□□□□□ -1
PTPRK-221ENST00000532331 C2orf70A6NJV1 201 aa8.8□□□□□ -1
PTPRK-221ENST00000532331 HLA-DRB4P13762 266 aa8.8□□□□□ -1
PTPRK-221ENST00000532331 RHOHQ15669 191 aa8.8□□□□□ -1
PTPRK-221ENST00000532331 Q6ZSR3 168 aa8.8□□□□□ -1
PTPRK-221ENST00000532331 HLA-DRB4X5D2U9 266 aa8.8□□□□□ -1
PTPRK-221ENST00000532331 SPG11Q96JI7 2443 aa8.8□□□□□ -1
PTPRK-221ENST00000532331 F6UB75 175 aa8.8□□□□□ -1
PTPRK-221ENST00000532331 IGLV11-55A0A075B6I3 123 aa8.79□□□□□ -1
PTPRK-221ENST00000532331 DENND4AQ7Z401 1863 aa8.79□□□□□ -1
PTPRK-221ENST00000532331 ATP5G1P05496 136 aa8.79□□□□□ -1
PTPRK-221ENST00000532331 TRAV8-3A0A0A6YYJ7 113 aa8.79□□□□□ -1
PTPRK-221ENST00000532331 VWC2LB2RUY7 222 aa8.79□□□□□ -1
PTPRK-221ENST00000532331 LTAP01374 205 aa8.79□□□□□ -1
PTPRK-221ENST00000532331 MRPL52Q86TS9 123 aaKnown RBP8.79□□□□□ -1
PTPRK-221ENST00000532331 C16orf74Q96GX8 76 aa8.79□□□□□ -1
PTPRK-221ENST00000532331 SIGMAR1Q99720 223 aa8.79□□□□□ -1
PTPRK-221ENST00000532331 SMIM2Q9BVW6 85 aa8.79□□□□□ -1
PTPRK-221ENST00000532331 RBAKDNA6NC62 111 aa8.78□□□□□ -1
PTPRK-221ENST00000532331 IL15RAQ13261 267 aa8.78□□□□□ -1
PTPRK-221ENST00000532331 C22orf34Q6ZV56 151 aa8.78□□□□□ -1
PTPRK-221ENST00000532331 ALPK3Q96L96 1907 aa8.78□□□□□ -1
PTPRK-221ENST00000532331 C17orf77Q96MU5 243 aa8.78□□□□□ -1
PTPRK-221ENST00000532331 LENEPQ9Y5L5 61 aa8.78□□□□□ -1
PTPRK-221ENST00000532331 ZNF664Q8N3J9 261 aa8.78□□□□□ -1
PTPRK-221ENST00000532331 U3KQE9 123 aa8.78□□□□□ -1
PTPRK-221ENST00000532331 ANGP03950 147 aaKnown RBP8.78□□□□□ -1
PTPRK-221ENST00000532331 DYNAPQ8N1N2 210 aa8.78□□□□□ -1
PTPRK-221ENST00000532331 C20orf78Q9BR46 151 aa8.78□□□□□ -1
PTPRK-221ENST00000532331 ANKHD1Q8IWZ3 2542 aaKnown RBP8.78□□□□□ -1
PTPRK-221ENST00000532331 NOTCH3Q9UM47 2321 aa8.78□□□□□ -1
PTPRK-221ENST00000532331 SIGLEC8Q9NYZ4 499 aa8.78□□□□□ -1
PTPRK-221ENST00000532331 HLA-DMBP28068 263 aa8.77□□□□□ -1
PTPRK-221ENST00000532331 PFN2P35080 140 aa8.77□□□□□ -1
PTPRK-221ENST00000532331 C11orf71Q6IPW1 123 aa8.77□□□□□ -1
PTPRK-221ENST00000532331 IGKV2D-24A0A075B6R9 120 aa8.77□□□□□ -1.01
PTPRK-221ENST00000532331 GPHB5Q86YW7 130 aa8.77□□□□□ -1.01
PTPRK-221ENST00000532331 RNF152Q8N8N0 203 aa8.77□□□□□ -1.01
PTPRK-221ENST00000532331 NKAPP1Q8N9T2 125 aa8.77□□□□□ -1.01
PTPRK-221ENST00000532331 AGPAT4-IT1Q9H0P7 198 aa8.77□□□□□ -1.01
PTPRK-221ENST00000532331 NPYP01303 97 aa8.77□□□□□ -1.01
PTPRK-221ENST00000532331 ZNF493Q6ZR52 646 aa8.77□□□□□ -1.01
PTPRK-221ENST00000532331 F8W735 103 aaPredicted RBP8.77□□□□□ -1.01
PTPRK-221ENST00000532331 DEFB135Q30KP9 77 aa8.77□□□□□ -1.01
PTPRK-221ENST00000532331 ICOSQ9Y6W8 199 aa8.77□□□□□ -1.01
PTPRK-221ENST00000532331 K7EMT4 169 aa8.76□□□□□ -1.01
PTPRK-221ENST00000532331 NDUFS6O75380 124 aaKnown RBP8.76□□□□□ -1.01
PTPRK-221ENST00000532331 IGHV1-24A0A0C4DH33 117 aa8.76□□□□□ -1.01
PTPRK-221ENST00000532331 I3L2K1 104 aa8.76□□□□□ -1.01
PTPRK-221ENST00000532331 IGKV1OR2-108A0A075B7D4 117 aa8.76□□□□□ -1.01
PTPRK-221ENST00000532331 K7EIM0 57 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms