RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 ZNF705FA8MVS1 300 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P42-201ENST00000532126 OR7C2O60412 319 aa4.16□□□□□ -1.74
HMGB1P42-201ENST00000532126 ZNF253O75346 499 aa4.16□□□□□ -1.74
HMGB1P42-201ENST00000532126 TSHBP01222 138 aa4.16□□□□□ -1.74
HMGB1P42-201ENST00000532126 AMBPP02760 352 aa4.16□□□□□ -1.74
HMGB1P42-201ENST00000532126 OR10J4P0C629 311 aa4.16□□□□□ -1.74
HMGB1P42-201ENST00000532126 PRB4P10163 310 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P42-201ENST00000532126 TAS2R45P59539 299 aa4.16□□□□□ -1.74
HMGB1P42-201ENST00000532126 PDE6HQ13956 83 aa4.16□□□□□ -1.74
HMGB1P42-201ENST00000532126 SPINK13Q1W4C9 94 aa4.16□□□□□ -1.74
HMGB1P42-201ENST00000532126 ACOT6Q3I5F7 207 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P42-201ENST00000532126 LINC00242Q5T6M2 205 aa4.16□□□□□ -1.74
HMGB1P42-201ENST00000532126 AMTNQ6UX39 209 aa4.16□□□□□ -1.74
HMGB1P42-201ENST00000532126 ZNF705AQ6ZN79 300 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P42-201ENST00000532126 Q8NAQ8 132 aa4.16□□□□□ -1.74
HMGB1P42-201ENST00000532126 HSD17B11Q8NBQ5 300 aa4.16□□□□□ -1.74
HMGB1P42-201ENST00000532126 BLNKQ8WV28 456 aa4.16□□□□□ -1.74
HMGB1P42-201ENST00000532126 FAM167A-AS1Q96KT0 104 aa4.16□□□□□ -1.74
HMGB1P42-201ENST00000532126 KRTAP4-12Q9BQ66 201 aa4.16□□□□□ -1.74
HMGB1P42-201ENST00000532126 TMEM208Q9BTX3 173 aa4.16□□□□□ -1.74
HMGB1P42-201ENST00000532126 PAXXQ9BUH6 204 aa4.16□□□□□ -1.74
HMGB1P42-201ENST00000532126 TNFSF18Q9UNG2 199 aa4.16□□□□□ -1.74
HMGB1P42-201ENST00000532126 GOLT1BQ9Y3E0 138 aa4.16□□□□□ -1.74
HMGB1P42-201ENST00000532126 NBEAL2Q6ZNJ1 2754 aa4.15□□□□□ -1.74
HMGB1P42-201ENST00000532126 BORCS7-ASMTA0A0B4J1R7 106 aa4.15□□□□□ -1.75
HMGB1P42-201ENST00000532126 NUPR2A6NF83 97 aa4.15□□□□□ -1.75
HMGB1P42-201ENST00000532126 PRAC2D3DTV9 90 aa4.15□□□□□ -1.75
HMGB1P42-201ENST00000532126 M0QXV9 152 aa4.15□□□□□ -1.75
HMGB1P42-201ENST00000532126 M0R2Z0 102 aa4.15□□□□□ -1.75
HMGB1P42-201ENST00000532126 ARPC5O15511 151 aa4.15□□□□□ -1.75
HMGB1P42-201ENST00000532126 INSP01308 110 aa4.15□□□□□ -1.75
HMGB1P42-201ENST00000532126 NBEAP1P0C6P0 100 aa4.15□□□□□ -1.75
HMGB1P42-201ENST00000532126 RBMY1A1P0DJD3 496 aaKnown RBP4.15□□□□□ -1.75
HMGB1P42-201ENST00000532126 RBMY1CP0DJD4 496 aa4.15□□□□□ -1.75
HMGB1P42-201ENST00000532126 NANOS2P60321 138 aaKnown RBP4.15□□□□□ -1.75
HMGB1P42-201ENST00000532126 UBE2L3P68036 154 aaKnown RBP4.15□□□□□ -1.75
HMGB1P42-201ENST00000532126 RBMY1FQ15415 496 aaKnown RBP4.15□□□□□ -1.75
HMGB1P42-201ENST00000532126 KHDC3LQ587J8 217 aa4.15□□□□□ -1.75
HMGB1P42-201ENST00000532126 C1orf158Q8N1D5 194 aa4.15□□□□□ -1.75
HMGB1P42-201ENST00000532126 EXOC3-AS1Q8N2X6 119 aa4.15□□□□□ -1.75
HMGB1P42-201ENST00000532126 OR10G4Q8NGN3 311 aa4.15□□□□□ -1.75
HMGB1P42-201ENST00000532126 OR10G9Q8NGN4 311 aa4.15□□□□□ -1.75
HMGB1P42-201ENST00000532126 OR10G7Q8NGN6 311 aa4.15□□□□□ -1.75
HMGB1P42-201ENST00000532126 FXYD5Q96DB9 178 aa4.15□□□□□ -1.75
HMGB1P42-201ENST00000532126 GNPNAT1Q96EK6 184 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P42-201ENST00000532126 IGF2BP2-AS1Q96M15 143 aa4.15□□□□□ -1.75
HMGB1P42-201ENST00000532126 C9orf85Q96MD7 179 aa4.15□□□□□ -1.75
HMGB1P42-201ENST00000532126 PSMG3Q9BT73 122 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P42-201ENST00000532126 RFNGQ9Y644 331 aa4.15□□□□□ -1.75
HMGB1P42-201ENST00000532126 TRAV12-2A0A075B6T6 113 aa4.14□□□□□ -1.75
HMGB1P42-201ENST00000532126 TMEM189A5PLL7 270 aa4.14□□□□□ -1.75
HMGB1P42-201ENST00000532126 G3V3Q6 166 aa4.14□□□□□ -1.75
HMGB1P42-201ENST00000532126 M0R036 132 aa4.14□□□□□ -1.75
HMGB1P42-201ENST00000532126 M0R3E3 92 aa4.14□□□□□ -1.75
HMGB1P42-201ENST00000532126 TAAR5O14804 337 aa4.14□□□□□ -1.75
HMGB1P42-201ENST00000532126 CRXO43186 299 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P42-201ENST00000532126 EIF3GO75821 320 aaKnown RBP eCLIP4.14□□□□□ -1.75
HMGB1P42-201ENST00000532126 ATP6V0CP27449 155 aa4.14□□□□□ -1.75
HMGB1P42-201ENST00000532126 TSPOP30536 169 aa4.14□□□□□ -1.75
HMGB1P42-201ENST00000532126 CSN1S1P47710 185 aa4.14□□□□□ -1.75
HMGB1P42-201ENST00000532126 EMP1P54849 157 aa4.14□□□□□ -1.75
HMGB1P42-201ENST00000532126 RAB2AP61019 212 aa4.14□□□□□ -1.75
HMGB1P42-201ENST00000532126 RAB14P61106 215 aa4.14□□□□□ -1.75
HMGB1P42-201ENST00000532126 RANP62826 216 aaKnown RBP4.14□□□□□ -1.75
HMGB1P42-201ENST00000532126 SERF2P84101 59 aa4.14□□□□□ -1.75
HMGB1P42-201ENST00000532126 TAL2Q16559 108 aa4.14□□□□□ -1.75
HMGB1P42-201ENST00000532126 RRN3P1Q2M238 152 aa4.14□□□□□ -1.75
HMGB1P42-201ENST00000532126 COX19Q49B96 90 aa4.14□□□□□ -1.75
HMGB1P42-201ENST00000532126 MUC21Q5SSG8 566 aa4.14□□□□□ -1.75
HMGB1P42-201ENST00000532126 LCE3BQ5TA77 95 aa4.14□□□□□ -1.75
HMGB1P42-201ENST00000532126 RPL7L1Q6DKI1 246 aaKnown RBP4.14□□□□□ -1.75
HMGB1P42-201ENST00000532126 CEMP1Q6PRD7 247 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P42-201ENST00000532126 MRPL52Q86TS9 123 aaKnown RBP4.14□□□□□ -1.75
HMGB1P42-201ENST00000532126 BAP18Q8IXM2 172 aa4.14□□□□□ -1.75
HMGB1P42-201ENST00000532126 RPP25LQ8N5L8 163 aaKnown RBP4.14□□□□□ -1.75
HMGB1P42-201ENST00000532126 ZNF680Q8NEM1 530 aa4.14□□□□□ -1.75
HMGB1P42-201ENST00000532126 OR2G3Q8NGZ4 309 aa4.14□□□□□ -1.75
HMGB1P42-201ENST00000532126 SH3BGRL3Q9H299 93 aa4.14□□□□□ -1.75
HMGB1P42-201ENST00000532126 KLK5Q9Y337 293 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P42-201ENST00000532126 C11orf94C9JXX5 98 aa4.13□□□□□ -1.75
HMGB1P42-201ENST00000532126 HMGB3O15347 200 aaKnown RBP4.13□□□□□ -1.75
HMGB1P42-201ENST00000532126 SNAPINO95295 136 aa4.13□□□□□ -1.75
HMGB1P42-201ENST00000532126 SPART-AS1P0CW21 52 aa4.13□□□□□ -1.75
HMGB1P42-201ENST00000532126 CT45A10P0DMU9 189 aa4.13□□□□□ -1.75
HMGB1P42-201ENST00000532126 ERCC8Q13216 396 aa4.13□□□□□ -1.75
HMGB1P42-201ENST00000532126 LYPD1Q8N2G4 141 aa4.13□□□□□ -1.75
HMGB1P42-201ENST00000532126 TMEM256Q8N2U0 113 aa4.13□□□□□ -1.75
HMGB1P42-201ENST00000532126 RXFP4Q8TDU9 374 aa4.13□□□□□ -1.75
HMGB1P42-201ENST00000532126 PHYHIPLQ96FC7 376 aa4.13□□□□□ -1.75
HMGB1P42-201ENST00000532126 LINC00477Q96M19 166 aa4.13□□□□□ -1.75
HMGB1P42-201ENST00000532126 FAM218AQ96MZ4 157 aa4.13□□□□□ -1.75
HMGB1P42-201ENST00000532126 ODF3Q96PU9 254 aa4.13□□□□□ -1.75
HMGB1P42-201ENST00000532126 LINC01587Q99440 93 aa4.13□□□□□ -1.75
HMGB1P42-201ENST00000532126 Q9H3A6 140 aa4.13□□□□□ -1.75
HMGB1P42-201ENST00000532126 IGKV2-40A0A087WW87 121 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P42-201ENST00000532126 LCE6AA0A183 80 aa4.12□□□□□ -1.75
HMGB1P42-201ENST00000532126 TEX48A0A1B0GUV7 120 aa4.12□□□□□ -1.75
HMGB1P42-201ENST00000532126 A0A1B0GWB2 263 aa4.12□□□□□ -1.75
HMGB1P42-201ENST00000532126 HMSDA8MTL9 139 aa4.12□□□□□ -1.75
HMGB1P42-201ENST00000532126 ZNF705GA8MUZ8 300 aaPredicted RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms