RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 ZNF492Q9P255 531 aa5.98□□□□□ -1.45
USF1-210ENST00000531842 K7EQD1 137 aa5.97□□□□□ -1.45
USF1-210ENST00000531842 OR7C2O60412 319 aa5.97□□□□□ -1.45
USF1-210ENST00000531842 PLA2G1BP04054 148 aaKnown RBP5.97□□□□□ -1.45
USF1-210ENST00000531842 EVI2AP22794 236 aa5.97□□□□□ -1.45
USF1-210ENST00000531842 SRIP30626 198 aa5.97□□□□□ -1.45
USF1-210ENST00000531842 RAB2AP61019 212 aa5.97□□□□□ -1.45
USF1-210ENST00000531842 FFAR4Q5NUL3 377 aa5.97□□□□□ -1.45
USF1-210ENST00000531842 ZFAND2AQ8N6M9 145 aa5.97□□□□□ -1.45
USF1-210ENST00000531842 Q8N814 137 aa5.97□□□□□ -1.45
USF1-210ENST00000531842 ZNF479Q96JC4 524 aa5.97□□□□□ -1.45
USF1-210ENST00000531842 AQP10Q96PS8 301 aa5.97□□□□□ -1.45
USF1-210ENST00000531842 MED28Q9H204 178 aa5.97□□□□□ -1.45
USF1-210ENST00000531842 KCNIP2Q9NS61 270 aa5.97□□□□□ -1.45
USF1-210ENST00000531842 C17orf112F2Z3M2 114 aa5.96□□□□□ -1.46
USF1-210ENST00000531842 PSCAO43653 123 aa5.96□□□□□ -1.46
USF1-210ENST00000531842 GIPP09681 153 aaPredicted RBP5.96□□□□□ -1.46
USF1-210ENST00000531842 PET100P0DJ07 73 aa5.96□□□□□ -1.46
USF1-210ENST00000531842 GYPEP15421 78 aa5.96□□□□□ -1.46
USF1-210ENST00000531842 TMEM183BQ1AE95 376 aa5.96□□□□□ -1.46
USF1-210ENST00000531842 FAM159AQ6UWV7 190 aa5.96□□□□□ -1.46
USF1-210ENST00000531842 TMEM183AQ8IXX5 376 aa5.96□□□□□ -1.46
USF1-210ENST00000531842 Q8N3U1 123 aa5.96□□□□□ -1.46
USF1-210ENST00000531842 DEFB104AQ8WTQ1 72 aa5.96□□□□□ -1.46
USF1-210ENST00000531842 HYLS1Q96M11 299 aa5.96□□□□□ -1.46
USF1-210ENST00000531842 MRPL32Q9BYC8 188 aaKnown RBP5.96□□□□□ -1.46
USF1-210ENST00000531842 SH3BGRL3Q9H299 93 aa5.96□□□□□ -1.46
USF1-210ENST00000531842 NAGKQ9UJ70 344 aa5.96□□□□□ -1.46
USF1-210ENST00000531842 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.95□□□□□ -1.46
USF1-210ENST00000531842 TRBV7-9A0A0J9YWB2 115 aa5.95□□□□□ -1.46
USF1-210ENST00000531842 SMLR1H3BR10 107 aa5.95□□□□□ -1.46
USF1-210ENST00000531842 ORM1P02763 201 aa5.95□□□□□ -1.46
USF1-210ENST00000531842 HNRNPA3P51991 378 aaKnown RBP5.95□□□□□ -1.46
USF1-210ENST00000531842 UBE2L3P68036 154 aaKnown RBP5.95□□□□□ -1.46
USF1-210ENST00000531842 ZNF266Q14584 549 aa5.95□□□□□ -1.46
USF1-210ENST00000531842 RGS21Q2M5E4 152 aa5.95□□□□□ -1.46
USF1-210ENST00000531842 SCXQ7RTU7 201 aa5.95□□□□□ -1.46
USF1-210ENST00000531842 OR4C5Q8NGB2 326 aa5.95□□□□□ -1.46
USF1-210ENST00000531842 TNFSF18Q9UNG2 199 aa5.95□□□□□ -1.46
USF1-210ENST00000531842 TRGV11A0A075B6L2 103 aa5.94□□□□□ -1.46
USF1-210ENST00000531842 C9JCJ5 164 aa5.94□□□□□ -1.46
USF1-210ENST00000531842 HMGB3O15347 200 aaKnown RBP5.94□□□□□ -1.46
USF1-210ENST00000531842 IGHV3-30P01768 117 aa5.94□□□□□ -1.46
USF1-210ENST00000531842 IGHV3-33P01772 117 aa5.94□□□□□ -1.46
USF1-210ENST00000531842 IGHV3-30-3P0DP02 117 aa5.94□□□□□ -1.46
USF1-210ENST00000531842 IGHV3-30-5P0DP03 117 aa5.94□□□□□ -1.46
USF1-210ENST00000531842 ATP6V0CP27449 155 aa5.94□□□□□ -1.46
USF1-210ENST00000531842 LRP2P98164 4655 aa5.94□□□□□ -1.46
USF1-210ENST00000531842 ZNF726P1Q15940 193 aa5.94□□□□□ -1.46
USF1-210ENST00000531842 RPL7L1Q6DKI1 246 aaKnown RBP5.94□□□□□ -1.46
USF1-210ENST00000531842 Q6ZSA8 131 aa5.94□□□□□ -1.46
USF1-210ENST00000531842 HSD17B11Q8NBQ5 300 aa5.94□□□□□ -1.46
USF1-210ENST00000531842 OR11H4Q8NGC9 324 aa5.94□□□□□ -1.46
USF1-210ENST00000531842 OR2G3Q8NGZ4 309 aa5.94□□□□□ -1.46
USF1-210ENST00000531842 CMTM2Q8TAZ6 248 aa5.94□□□□□ -1.46
USF1-210ENST00000531842 SCGB1C1Q8TD33 95 aa5.94□□□□□ -1.46
USF1-210ENST00000531842 RASL10AQ92737 203 aa5.94□□□□□ -1.46
USF1-210ENST00000531842 TVP23CQ96ET8 276 aa5.94□□□□□ -1.46
USF1-210ENST00000531842 TXNDC17Q9BRA2 123 aa5.94□□□□□ -1.46
USF1-210ENST00000531842 SPXQ9BT56 116 aa5.94□□□□□ -1.46
USF1-210ENST00000531842 CYTL1Q9NRR1 136 aa5.94□□□□□ -1.46
USF1-210ENST00000531842 RPH3ALQ9UNE2 315 aa5.94□□□□□ -1.46
USF1-210ENST00000531842 IGHV3-16A0A0C4DH30 117 aa5.93□□□□□ -1.46
USF1-210ENST00000531842 RBAKDNA6NC62 111 aa5.93□□□□□ -1.46
USF1-210ENST00000531842 DIRC3C9JPN6 131 aa5.93□□□□□ -1.46
USF1-210ENST00000531842 K7EP13 123 aa5.93□□□□□ -1.46
USF1-210ENST00000531842 PPT1P50897 306 aa5.93□□□□□ -1.46
USF1-210ENST00000531842 TAS2R45P59539 299 aa5.93□□□□□ -1.46
USF1-210ENST00000531842 KHDC3LQ587J8 217 aa5.93□□□□□ -1.46
USF1-210ENST00000531842 IQCF2Q8IXL9 164 aa5.93□□□□□ -1.46
USF1-210ENST00000531842 C10orf126Q8N4M7 172 aa5.93□□□□□ -1.46
USF1-210ENST00000531842 NHLRC2Q8NBF2 726 aa5.93□□□□□ -1.46
USF1-210ENST00000531842 OR10G4Q8NGN3 311 aa5.93□□□□□ -1.46
USF1-210ENST00000531842 OR2T35Q8NGX2 323 aa5.93□□□□□ -1.46
USF1-210ENST00000531842 SUN5Q8TC36 379 aa5.93□□□□□ -1.46
USF1-210ENST00000531842 NTN5Q8WTR8 489 aaPredicted RBP5.93□□□□□ -1.46
USF1-210ENST00000531842 TRAV4A0A0B4J268 109 aa5.92□□□□□ -1.46
USF1-210ENST00000531842 PGPA6NDG6 321 aa5.92□□□□□ -1.46
USF1-210ENST00000531842 M0R2P5 195 aa5.92□□□□□ -1.46
USF1-210ENST00000531842 GNRH2O43555 120 aa5.92□□□□□ -1.46
USF1-210ENST00000531842 IGLV2-8P01709 118 aa5.92□□□□□ -1.46
USF1-210ENST00000531842 STAG3L2P0CL84 134 aa5.92□□□□□ -1.46
USF1-210ENST00000531842 STAG3L3P0CL85 134 aa5.92□□□□□ -1.46
USF1-210ENST00000531842 ODF1Q14990 250 aa5.92□□□□□ -1.46
USF1-210ENST00000531842 FAM74A1Q5RGS3 127 aa5.92□□□□□ -1.46
USF1-210ENST00000531842 Q6AWC8 147 aa5.92□□□□□ -1.46
USF1-210ENST00000531842 SH2D6Q7Z4S9 175 aa5.92□□□□□ -1.46
USF1-210ENST00000531842 OR10G9Q8NGN4 311 aa5.92□□□□□ -1.46
USF1-210ENST00000531842 OR10G7Q8NGN6 311 aa5.92□□□□□ -1.46
USF1-210ENST00000531842 ASB13Q8WXK3 278 aa5.92□□□□□ -1.46
USF1-210ENST00000531842 RAB24Q969Q5 203 aa5.92□□□□□ -1.46
USF1-210ENST00000531842 PSMG3Q9BT73 122 aaPredicted RBP5.92□□□□□ -1.46
USF1-210ENST00000531842 OTORQ9NRC9 128 aa5.92□□□□□ -1.46
USF1-210ENST00000531842 LENEPQ9Y5L5 61 aa5.92□□□□□ -1.46
USF1-210ENST00000531842 FXYD6-FXYD2A0A087WZ82 144 aa5.91□□□□□ -1.46
USF1-210ENST00000531842 TRAV8-1A0A0A6YYK1 113 aa5.91□□□□□ -1.46
USF1-210ENST00000531842 TRAV21A0A0B4J279 112 aa5.91□□□□□ -1.46
USF1-210ENST00000531842 A0A1W2PPV4 95 aa5.91□□□□□ -1.46
USF1-210ENST00000531842 IBA57-AS1B1ANH7 110 aa5.91□□□□□ -1.46
USF1-210ENST00000531842 ARL14EPLP0DKL9 152 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms