RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 K7ERS5 55 aa2.14□□□□□ -2.07
PTPRK-220ENST00000531466 LEPROTO15243 131 aa2.14□□□□□ -2.07
PTPRK-220ENST00000531466 BCE1O60756 84 aa2.14□□□□□ -2.07
PTPRK-220ENST00000531466 BSPH1Q075Z2 132 aa2.14□□□□□ -2.07
PTPRK-220ENST00000531466 SS18Q15532 418 aa2.14□□□□□ -2.07
PTPRK-220ENST00000531466 MPV17LQ2QL34 196 aa2.14□□□□□ -2.07
PTPRK-220ENST00000531466 TMEM170BQ5T4T1 132 aa2.14□□□□□ -2.07
PTPRK-220ENST00000531466 SPANXN1Q5VSR9 72 aa2.14□□□□□ -2.07
PTPRK-220ENST00000531466 LAIR2Q6ISS4 152 aa2.14□□□□□ -2.07
PTPRK-220ENST00000531466 Q8N8P6 123 aa2.14□□□□□ -2.07
PTPRK-220ENST00000531466 ITLN2Q8WWU7 325 aaPredicted RBP2.14□□□□□ -2.07
PTPRK-220ENST00000531466 CLEC2BQ92478 149 aa2.14□□□□□ -2.07
PTPRK-220ENST00000531466 RNASE6Q93091 150 aaKnown RBP2.14□□□□□ -2.07
PTPRK-220ENST00000531466 LINC01600Q96MT4 127 aa2.14□□□□□ -2.07
PTPRK-220ENST00000531466 OR8B2Q96RD0 313 aa2.14□□□□□ -2.07
PTPRK-220ENST00000531466 CAMK2N2Q96S95 79 aa2.14□□□□□ -2.07
PTPRK-220ENST00000531466 NXT2Q9NPJ8 142 aaKnown RBP2.14□□□□□ -2.07
PTPRK-220ENST00000531466 DENND4CQ5VZ89 1909 aa2.14□□□□□ -2.07
PTPRK-220ENST00000531466 LOXHD1Q8IVV2 1947 aa2.14□□□□□ -2.07
PTPRK-220ENST00000531466 NWD1Q149M9 1564 aa2.14□□□□□ -2.07
PTPRK-220ENST00000531466 MAST1Q9Y2H9 1570 aa2.14□□□□□ -2.07
PTPRK-220ENST00000531466 ITSN1Q15811 1721 aa2.14□□□□□ -2.07
PTPRK-220ENST00000531466 ANKRD31Q8N7Z5 1873 aa2.14□□□□□ -2.07
PTPRK-220ENST00000531466 TMEM131Q92545 1883 aa2.14□□□□□ -2.07
PTPRK-220ENST00000531466 NESP48681 1621 aa2.13□□□□□ -2.07
PTPRK-220ENST00000531466 FBN1P35555 2871 aaKnown RBP2.13□□□□□ -2.07
PTPRK-220ENST00000531466 KIF13AQ9H1H9 1805 aa2.13□□□□□ -2.07
PTPRK-220ENST00000531466 IGLV4-60A0A075B6I1 120 aa2.13□□□□□ -2.07
PTPRK-220ENST00000531466 IGKV1-12A0A0C4DH73 117 aa2.13□□□□□ -2.07
PTPRK-220ENST00000531466 CRYM-AS1A6NIL9 109 aa2.13□□□□□ -2.07
PTPRK-220ENST00000531466 CCL16O15467 120 aa2.13□□□□□ -2.07
PTPRK-220ENST00000531466 IGKV1D-12P01611 117 aa2.13□□□□□ -2.07
PTPRK-220ENST00000531466 IGHV3-11P01762 117 aa2.13□□□□□ -2.07
PTPRK-220ENST00000531466 ASAH2BP0C7U1 165 aa2.13□□□□□ -2.07
PTPRK-220ENST00000531466 FXYD7P58549 80 aa2.13□□□□□ -2.07
PTPRK-220ENST00000531466 FAM104BQ5XKR9 115 aa2.13□□□□□ -2.07
PTPRK-220ENST00000531466 CEMP1Q6PRD7 247 aaPredicted RBP2.13□□□□□ -2.07
PTPRK-220ENST00000531466 SOSTDC1Q6X4U4 206 aa2.13□□□□□ -2.07
PTPRK-220ENST00000531466 LINC00643Q86TS7 51 aa2.13□□□□□ -2.07
PTPRK-220ENST00000531466 DEFB107AQ8IZN7 70 aa2.13□□□□□ -2.07
PTPRK-220ENST00000531466 C3orf56Q8N813 242 aa2.13□□□□□ -2.07
PTPRK-220ENST00000531466 Q8N976 141 aa2.13□□□□□ -2.07
PTPRK-220ENST00000531466 CST11Q9H112 138 aa2.13□□□□□ -2.07
PTPRK-220ENST00000531466 DYNLRB1Q9NP97 96 aa2.13□□□□□ -2.07
PTPRK-220ENST00000531466 MRPL35Q9NZE8 188 aaKnown RBP2.13□□□□□ -2.07
PTPRK-220ENST00000531466 SCN2AQ99250 2005 aa2.13□□□□□ -2.07
PTPRK-220ENST00000531466 MYH7BA7E2Y1 1941 aa2.13□□□□□ -2.07
PTPRK-220ENST00000531466 MROH2AA6NES4 1674 aa2.12□□□□□ -2.07
PTPRK-220ENST00000531466 TET3O43151 1660 aa2.12□□□□□ -2.07
PTPRK-220ENST00000531466 ASXL1Q8IXJ9 1541 aa2.12□□□□□ -2.07
PTPRK-220ENST00000531466 SCN1AP35498 2009 aa2.12□□□□□ -2.07
PTPRK-220ENST00000531466 CHD3Q12873 2000 aaKnown RBP2.12□□□□□ -2.07
PTPRK-220ENST00000531466 ANK1P16157 1881 aa2.12□□□□□ -2.07
PTPRK-220ENST00000531466 IGHV3-72A0A0B4J1Y9 119 aa2.12□□□□□ -2.07
PTPRK-220ENST00000531466 IGHV1OR15-9A0A0B4J2B8 117 aa2.12□□□□□ -2.07
PTPRK-220ENST00000531466 IBA57-AS1B1ANH7 110 aa2.12□□□□□ -2.07
PTPRK-220ENST00000531466 IGKV1-39P01597 117 aa2.12□□□□□ -2.07
PTPRK-220ENST00000531466 IGKV1-16P04430 117 aa2.12□□□□□ -2.07
PTPRK-220ENST00000531466 IGKV1D-39P04432 117 aa2.12□□□□□ -2.07
PTPRK-220ENST00000531466 CCKP06307 115 aa2.12□□□□□ -2.07
PTPRK-220ENST00000531466 COX8AP10176 69 aa2.12□□□□□ -2.07
PTPRK-220ENST00000531466 UBE2G1P62253 170 aa2.12□□□□□ -2.07
PTPRK-220ENST00000531466 INSL4Q14641 139 aa2.12□□□□□ -2.07
PTPRK-220ENST00000531466 RHOHQ15669 191 aa2.12□□□□□ -2.07
PTPRK-220ENST00000531466 IGFBP7Q16270 282 aa2.12□□□□□ -2.07
PTPRK-220ENST00000531466 ZNF791Q3KP31 576 aaPredicted RBP2.12□□□□□ -2.07
PTPRK-220ENST00000531466 MRPL51Q4U2R6 128 aaKnown RBP2.12□□□□□ -2.07
PTPRK-220ENST00000531466 KPRPQ5T749 579 aaPredicted RBP2.12□□□□□ -2.07
PTPRK-220ENST00000531466 RPL7L1Q6DKI1 246 aaKnown RBP2.12□□□□□ -2.07
PTPRK-220ENST00000531466 SLC48A1Q6P1K1 146 aa2.12□□□□□ -2.07
PTPRK-220ENST00000531466 IGFL1Q6UW32 110 aa2.12□□□□□ -2.07
PTPRK-220ENST00000531466 PATE2Q6UY27 113 aa2.12□□□□□ -2.07
PTPRK-220ENST00000531466 CYP2G1PQ6ZSU1 146 aa2.12□□□□□ -2.07
PTPRK-220ENST00000531466 C6orf201Q7Z4U5 140 aa2.12□□□□□ -2.07
PTPRK-220ENST00000531466 SPATA12Q7Z6I5 190 aa2.12□□□□□ -2.07
PTPRK-220ENST00000531466 CLDND2Q8NHS1 167 aa2.12□□□□□ -2.07
PTPRK-220ENST00000531466 CCL4L1Q8NHW4 92 aa2.12□□□□□ -2.07
PTPRK-220ENST00000531466 DYNLRB2Q8TF09 96 aa2.12□□□□□ -2.07
PTPRK-220ENST00000531466 Q96M85 177 aa2.12□□□□□ -2.07
PTPRK-220ENST00000531466 UPK3BQ9BT76 320 aa2.12□□□□□ -2.07
PTPRK-220ENST00000531466 NHP2Q9NX24 153 aaKnown RBP2.12□□□□□ -2.07
PTPRK-220ENST00000531466 NUP205Q92621 2012 aa2.12□□□□□ -2.07
PTPRK-220ENST00000531466 LTBP1Q14766 1721 aa2.11□□□□□ -2.07
PTPRK-220ENST00000531466 XRN1Q8IZH2 1706 aaKnown RBP2.11□□□□□ -2.07
PTPRK-220ENST00000531466 ARHGEF28Q8N1W1 1705 aaKnown RBP2.11□□□□□ -2.07
PTPRK-220ENST00000531466 ARHGEF5Q12774 1597 aa2.11□□□□□ -2.07
PTPRK-220ENST00000531466 TNRC6AQ8NDV7 1962 aaKnown RBP2.11□□□□□ -2.07
PTPRK-220ENST00000531466 TRAV3A0A0B4J244 114 aa2.11□□□□□ -2.07
PTPRK-220ENST00000531466 TRAV1-1A0A0B4J248 108 aa2.11□□□□□ -2.07
PTPRK-220ENST00000531466 IGHV1-24A0A0C4DH33 117 aa2.11□□□□□ -2.07
PTPRK-220ENST00000531466 IGKV1-6A0A0C4DH72 117 aa2.11□□□□□ -2.07
PTPRK-220ENST00000531466 K7EM74 188 aa2.11□□□□□ -2.07
PTPRK-220ENST00000531466 NPYP01303 97 aa2.11□□□□□ -2.07
PTPRK-220ENST00000531466 MSMBP08118 114 aa2.11□□□□□ -2.07
PTPRK-220ENST00000531466 PIRTP0C851 137 aa2.11□□□□□ -2.07
PTPRK-220ENST00000531466 DYNLT1P63172 113 aa2.11□□□□□ -2.07
PTPRK-220ENST00000531466 RBM3P98179 157 aaKnown RBP2.11□□□□□ -2.07
PTPRK-220ENST00000531466 Q1T7F1 81 aa2.11□□□□□ -2.07
PTPRK-220ENST00000531466 ZFP2Q6ZN57 461 aa2.11□□□□□ -2.07
PTPRK-220ENST00000531466 Q6ZQT7 251 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms