RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 NMES1Q9C002 83 aa6.1□□□□□ -1.43
NEDD8-206ENST00000531430 BOLA1Q9Y3E2 137 aa6.1□□□□□ -1.43
NEDD8-206ENST00000531430 TRAV8-3A0A0A6YYJ7 113 aa6.09□□□□□ -1.43
NEDD8-206ENST00000531430 IGSF23A1L1A6 192 aa6.09□□□□□ -1.43
NEDD8-206ENST00000531430 RHOHQ15669 191 aa6.09□□□□□ -1.43
NEDD8-206ENST00000531430 ZNF876PQ49A33 203 aa6.09□□□□□ -1.43
NEDD8-206ENST00000531430 Q6ZSA8 131 aa6.09□□□□□ -1.43
NEDD8-206ENST00000531430 DAZ4Q86SG3 579 aaKnown RBP6.09□□□□□ -1.43
NEDD8-206ENST00000531430 CMTM2Q8TAZ6 248 aa6.09□□□□□ -1.43
NEDD8-206ENST00000531430 CIRBP-AS1Q8TBR5 109 aa6.09□□□□□ -1.43
NEDD8-206ENST00000531430 FXYD5Q96DB9 178 aa6.09□□□□□ -1.43
NEDD8-206ENST00000531430 FAM167A-AS1Q96KT0 104 aa6.09□□□□□ -1.43
NEDD8-206ENST00000531430 C2orf50Q96LR7 162 aa6.09□□□□□ -1.43
NEDD8-206ENST00000531430 ATP5SQ99766 215 aa6.09□□□□□ -1.43
NEDD8-206ENST00000531430 CHAC1Q9BUX1 264 aa6.09□□□□□ -1.43
NEDD8-206ENST00000531430 GTSF1LQ9H1H1 148 aa6.09□□□□□ -1.43
NEDD8-206ENST00000531430 SDF2L1Q9HCN8 221 aa6.09□□□□□ -1.43
NEDD8-206ENST00000531430 DAZ3Q9NR90 486 aaKnown RBP6.09□□□□□ -1.43
NEDD8-206ENST00000531430 IGKV2D-24A0A075B6R9 120 aa6.08□□□□□ -1.44
NEDD8-206ENST00000531430 TRAV6A0A075B6T7 132 aa6.08□□□□□ -1.44
NEDD8-206ENST00000531430 TRAV21A0A0B4J279 112 aa6.08□□□□□ -1.44
NEDD8-206ENST00000531430 TRBV7-9A0A0J9YWB2 115 aa6.08□□□□□ -1.44
NEDD8-206ENST00000531430 PGPA6NDG6 321 aa6.08□□□□□ -1.44
NEDD8-206ENST00000531430 GAGE12JA6NER3 117 aa6.08□□□□□ -1.44
NEDD8-206ENST00000531430 GGTLC3B5MD39 225 aa6.08□□□□□ -1.44
NEDD8-206ENST00000531430 DIRC3C9JPN6 131 aa6.08□□□□□ -1.44
NEDD8-206ENST00000531430 F6UZH7 168 aa6.08□□□□□ -1.44
NEDD8-206ENST00000531430 TYMSP04818 313 aa6.08□□□□□ -1.44
NEDD8-206ENST00000531430 NHLH2Q02577 135 aa6.08□□□□□ -1.44
NEDD8-206ENST00000531430 GAGE1Q13065 139 aa6.08□□□□□ -1.44
NEDD8-206ENST00000531430 GAGE4Q13068 117 aa6.08□□□□□ -1.44
NEDD8-206ENST00000531430 GAGE5Q13069 117 aa6.08□□□□□ -1.44
NEDD8-206ENST00000531430 ACOT6Q3I5F7 207 aaPredicted RBP6.08□□□□□ -1.44
NEDD8-206ENST00000531430 TDRG1Q3Y452 100 aa6.08□□□□□ -1.44
NEDD8-206ENST00000531430 GAGE13Q4V321 117 aa6.08□□□□□ -1.44
NEDD8-206ENST00000531430 TOR2AQ5JU69 321 aa6.08□□□□□ -1.44
NEDD8-206ENST00000531430 Q6AWC8 147 aa6.08□□□□□ -1.44
NEDD8-206ENST00000531430 Q8N976 141 aa6.08□□□□□ -1.44
NEDD8-206ENST00000531430 NPCDR1Q9BY65 106 aa6.08□□□□□ -1.44
NEDD8-206ENST00000531430 TRBV6-4A0A1B0GX49 114 aa6.07□□□□□ -1.44
NEDD8-206ENST00000531430 RBAKDNA6NC62 111 aa6.07□□□□□ -1.44
NEDD8-206ENST00000531430 EIF3GO75821 320 aaKnown RBP eCLIP6.07□□□□□ -1.441e-7■■■■□ 19.4
NEDD8-206ENST00000531430 RPL37AP61513 92 aaKnown RBP6.07□□□□□ -1.44
NEDD8-206ENST00000531430 UBE2L3P68036 154 aaKnown RBP6.07□□□□□ -1.44
NEDD8-206ENST00000531430 RAB32Q13637 225 aa6.07□□□□□ -1.44
NEDD8-206ENST00000531430 CFAP126Q5VTH2 177 aa6.07□□□□□ -1.44
NEDD8-206ENST00000531430 ASB13Q8WXK3 278 aa6.07□□□□□ -1.44
NEDD8-206ENST00000531430 SGK494Q96LW2 274 aa6.07□□□□□ -1.44
NEDD8-206ENST00000531430 SEC22CQ9BRL7 303 aa6.07□□□□□ -1.44
NEDD8-206ENST00000531430 TREM1Q9NP99 234 aa6.07□□□□□ -1.44
NEDD8-206ENST00000531430 LYRM2Q9NU23 88 aaPredicted RBP6.07□□□□□ -1.44
NEDD8-206ENST00000531430 URGCP-MRPS24S4R325 110 aa6.07□□□□□ -1.44
NEDD8-206ENST00000531430 RS1O15537 224 aa6.06□□□□□ -1.44
NEDD8-206ENST00000531430 LAGE3Q14657 143 aa6.06□□□□□ -1.44
NEDD8-206ENST00000531430 DPPA3Q6W0C5 159 aa6.06□□□□□ -1.44
NEDD8-206ENST00000531430 GOLT1AQ6ZVE7 132 aa6.06□□□□□ -1.44
NEDD8-206ENST00000531430 OR5C1Q8NGR4 320 aa6.06□□□□□ -1.44
NEDD8-206ENST00000531430 OR2T35Q8NGX2 323 aa6.06□□□□□ -1.44
NEDD8-206ENST00000531430 CHAC2Q8WUX2 184 aa6.06□□□□□ -1.44
NEDD8-206ENST00000531430 RMI2Q96E14 147 aa6.06□□□□□ -1.44
NEDD8-206ENST00000531430 KCNS1Q96KK3 526 aa6.06□□□□□ -1.44
NEDD8-206ENST00000531430 SH3BGRL3Q9H299 93 aa6.06□□□□□ -1.44
NEDD8-206ENST00000531430 C11orf1Q9H5F2 150 aa6.06□□□□□ -1.44
NEDD8-206ENST00000531430 LENEPQ9Y5L5 61 aa6.06□□□□□ -1.44
NEDD8-206ENST00000531430 COX11Q9Y6N1 276 aa6.06□□□□□ -1.44
NEDD8-206ENST00000531430 FAT3Q8TDW7 4589 aa6.06□□□□□ -1.44
NEDD8-206ENST00000531430 RNF222A6NCQ9 220 aa6.05□□□□□ -1.44
NEDD8-206ENST00000531430 C17orf112F2Z3M2 114 aa6.05□□□□□ -1.44
NEDD8-206ENST00000531430 IGLV2-11P01706 119 aa6.05□□□□□ -1.44
NEDD8-206ENST00000531430 CNPY1Q3B7I2 92 aa6.05□□□□□ -1.44
NEDD8-206ENST00000531430 LGALSLQ3ZCW2 172 aaPredicted RBP6.05□□□□□ -1.44
NEDD8-206ENST00000531430 FAM74A1Q5RGS3 127 aa6.05□□□□□ -1.44
NEDD8-206ENST00000531430 UBE2WQ96B02 151 aa6.05□□□□□ -1.44
NEDD8-206ENST00000531430 DNAJC30Q96LL9 226 aa6.05□□□□□ -1.44
NEDD8-206ENST00000531430 MBD2Q9UBB5 411 aa6.05□□□□□ -1.44
NEDD8-206ENST00000531430 KLK12Q9UKR0 248 aa6.05□□□□□ -1.44
NEDD8-206ENST00000531430 TRAV8-1A0A0A6YYK1 113 aa6.04□□□□□ -1.44
NEDD8-206ENST00000531430 PGPEP1LA6NFU8 196 aa6.04□□□□□ -1.44
NEDD8-206ENST00000531430 CIDEAO60543 219 aa6.04□□□□□ -1.44
NEDD8-206ENST00000531430 BTCP35070 178 aa6.04□□□□□ -1.44
NEDD8-206ENST00000531430 ASAH1Q13510 395 aa6.04□□□□□ -1.44
NEDD8-206ENST00000531430 FFAR4Q5NUL3 377 aa6.04□□□□□ -1.44
NEDD8-206ENST00000531430 KCNIP4Q6PIL6 250 aa6.04□□□□□ -1.44
NEDD8-206ENST00000531430 TVP23CQ96ET8 276 aa6.04□□□□□ -1.44
NEDD8-206ENST00000531430 DPH3Q96FX2 82 aa6.04□□□□□ -1.44
NEDD8-206ENST00000531430 TMEM262E9PQX1 116 aa6.03□□□□□ -1.44
NEDD8-206ENST00000531430 TCRBP04435 133 aa6.03□□□□□ -1.44
NEDD8-206ENST00000531430 MGST1P10620 155 aaKnown RBP6.03□□□□□ -1.44
NEDD8-206ENST00000531430 TAS2R45P59539 299 aa6.03□□□□□ -1.44
NEDD8-206ENST00000531430 KRTAP10-4P60372 401 aaPredicted RBP6.03□□□□□ -1.44
NEDD8-206ENST00000531430 GNG5P63218 68 aa6.03□□□□□ -1.44
NEDD8-206ENST00000531430 LRRC37A5PQ49AS3 106 aa6.03□□□□□ -1.44
NEDD8-206ENST00000531430 SCGB1C1Q8TD33 95 aa6.03□□□□□ -1.44
NEDD8-206ENST00000531430 NDFIP1Q9BT67 221 aa6.03□□□□□ -1.44
NEDD8-206ENST00000531430 SAMD10Q9BYL1 202 aa6.03□□□□□ -1.44
NEDD8-206ENST00000531430 WDR61Q9GZS3 305 aaKnown RBP6.03□□□□□ -1.44
NEDD8-206ENST00000531430 OTORQ9NRC9 128 aa6.03□□□□□ -1.44
NEDD8-206ENST00000531430 KCNIP2Q9NS61 270 aa6.03□□□□□ -1.44
NEDD8-206ENST00000531430 A0A087WX48 190 aa6.02□□□□□ -1.45
NEDD8-206ENST00000531430 TAAR5O14804 337 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms