RNA–Protein interactions for RNA: ENST00000530442.5

CAPN1-218, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-218ENST00000530442 MED9Q9NWA0 146 aa7.82□□□□□ -1.16
CAPN1-218ENST00000530442 KMT2CQ8NEZ4 4911 aaKnown RBP7.82□□□□□ -1.16
CAPN1-218ENST00000530442 SACSQ9NZJ4 4579 aa7.81□□□□□ -1.16
CAPN1-218ENST00000530442 TRGV11A0A075B6L2 103 aa7.81□□□□□ -1.16
CAPN1-218ENST00000530442 RAB19A4D1S5 217 aa7.81□□□□□ -1.16
CAPN1-218ENST00000530442 SNURFLB1AK76 121 aa7.81□□□□□ -1.16
CAPN1-218ENST00000530442 TMEM250H0YL14 139 aa7.81□□□□□ -1.16
CAPN1-218ENST00000530442 SH2D1AO60880 128 aa7.81□□□□□ -1.16
CAPN1-218ENST00000530442 IGLV2-8P01709 118 aa7.81□□□□□ -1.16
CAPN1-218ENST00000530442 TCL1AP56279 114 aa7.81□□□□□ -1.16
CAPN1-218ENST00000530442 ZNF415Q09FC8 603 aa7.81□□□□□ -1.16
CAPN1-218ENST00000530442 ZNF674Q2M3X9 581 aa7.81□□□□□ -1.16
CAPN1-218ENST00000530442 BAGE2Q86Y30 109 aa7.81□□□□□ -1.16
CAPN1-218ENST00000530442 EIF5A2Q9GZV4 153 aaKnown RBP7.81□□□□□ -1.16
CAPN1-218ENST00000530442 PARLQ9H300 379 aa7.81□□□□□ -1.16
CAPN1-218ENST00000530442 MDFICQ9P1T7 246 aa7.81□□□□□ -1.16
CAPN1-218ENST00000530442 TIMM8BQ9Y5J9 83 aaPredicted RBP7.81□□□□□ -1.16
CAPN1-218ENST00000530442 DNAH1Q9P2D7 4330 aa7.81□□□□□ -1.16
CAPN1-218ENST00000530442 IGKV3D-20A0A0C4DH25 116 aa7.8□□□□□ -1.16
CAPN1-218ENST00000530442 IGHV3-16A0A0C4DH30 117 aa7.8□□□□□ -1.16
CAPN1-218ENST00000530442 PGPEP1LA6NFU8 196 aa7.8□□□□□ -1.16
CAPN1-218ENST00000530442 C3orf84H3BNL1 204 aa7.8□□□□□ -1.16
CAPN1-218ENST00000530442 GNRH2O43555 120 aa7.8□□□□□ -1.16
CAPN1-218ENST00000530442 NDUFS6O75380 124 aaKnown RBP7.8□□□□□ -1.16
CAPN1-218ENST00000530442 DAZ2Q13117 558 aaKnown RBP7.8□□□□□ -1.16
CAPN1-218ENST00000530442 CASC10Q5T4H9 136 aa7.8□□□□□ -1.16
CAPN1-218ENST00000530442 FAM162BQ5T6X4 162 aa7.8□□□□□ -1.16
CAPN1-218ENST00000530442 LINC00612Q8N6U2 182 aa7.8□□□□□ -1.16
CAPN1-218ENST00000530442 PHLDA1Q8WV24 401 aaPredicted RBP7.8□□□□□ -1.16
CAPN1-218ENST00000530442 SDF2L1Q9HCN8 221 aa7.8□□□□□ -1.16
CAPN1-218ENST00000530442 FABP5P3A8MUU1 101 aa7.79□□□□□ -1.16
CAPN1-218ENST00000530442 SPINK4O60575 86 aa7.79□□□□□ -1.16
CAPN1-218ENST00000530442 SRP19P09132 144 aaKnown RBP7.79□□□□□ -1.16
CAPN1-218ENST00000530442 GNG4P50150 75 aa7.79□□□□□ -1.16
CAPN1-218ENST00000530442 DAD1P61803 113 aa7.79□□□□□ -1.16
CAPN1-218ENST00000530442 SRSF3P84103 164 aaKnown RBP7.79□□□□□ -1.16
CAPN1-218ENST00000530442 LINC01559Q495D7 138 aa7.79□□□□□ -1.16
CAPN1-218ENST00000530442 CLLU1Q5K131 121 aa7.79□□□□□ -1.16
CAPN1-218ENST00000530442 PRR27Q6MZM9 219 aa7.79□□□□□ -1.16
CAPN1-218ENST00000530442 SMIM12Q96EX1 92 aa7.79□□□□□ -1.16
CAPN1-218ENST00000530442 KCNS1Q96KK3 526 aa7.79□□□□□ -1.16
CAPN1-218ENST00000530442 TENM2Q9NT68 2774 aa7.78□□□□□ -1.16
CAPN1-218ENST00000530442 NUPR2A6NF83 97 aa7.78□□□□□ -1.16
CAPN1-218ENST00000530442 C9JCJ5 164 aa7.78□□□□□ -1.16
CAPN1-218ENST00000530442 C9JQL5 133 aa7.78□□□□□ -1.16
CAPN1-218ENST00000530442 M0R036 132 aa7.78□□□□□ -1.16
CAPN1-218ENST00000530442 DEFB130BP0DP73 79 aa7.78□□□□□ -1.16
CAPN1-218ENST00000530442 DEFB130AP0DP74 79 aa7.78□□□□□ -1.16
CAPN1-218ENST00000530442 CEBPGP53567 150 aa7.78□□□□□ -1.16
CAPN1-218ENST00000530442 RAB14P61106 215 aa7.78□□□□□ -1.16
CAPN1-218ENST00000530442 Q6ZTI0 123 aa7.78□□□□□ -1.16
CAPN1-218ENST00000530442 ZNF575Q86XF7 245 aa7.78□□□□□ -1.16
CAPN1-218ENST00000530442 MRPL16Q9NX20 251 aaKnown RBP7.78□□□□□ -1.16
CAPN1-218ENST00000530442 MUC4Q99102 2169 aa7.78□□□□□ -1.16
CAPN1-218ENST00000530442 TRGV1A0A0A0MS02 117 aa7.77□□□□□ -1.17
CAPN1-218ENST00000530442 TRAV10A0A0B4J240 114 aa7.77□□□□□ -1.17
CAPN1-218ENST00000530442 GAGE12BA1L429 117 aa7.77□□□□□ -1.17
CAPN1-218ENST00000530442 B4DEV8 164 aa7.77□□□□□ -1.17
CAPN1-218ENST00000530442 KRBOX1C9JBD0 128 aa7.77□□□□□ -1.17
CAPN1-218ENST00000530442 K7EN84 100 aa7.77□□□□□ -1.17
CAPN1-218ENST00000530442 GAGE7O76087 117 aa7.77□□□□□ -1.17
CAPN1-218ENST00000530442 ORM1P02763 201 aa7.77□□□□□ -1.17
CAPN1-218ENST00000530442 GAGE12FP0CL80 117 aa7.77□□□□□ -1.17
CAPN1-218ENST00000530442 GAGE12GP0CL81 117 aa7.77□□□□□ -1.17
CAPN1-218ENST00000530442 GAGE12IP0CL82 117 aa7.77□□□□□ -1.17
CAPN1-218ENST00000530442 MGST1P10620 155 aaKnown RBP7.77□□□□□ -1.17
CAPN1-218ENST00000530442 RNASE3P12724 160 aaKnown RBP7.77□□□□□ -1.17
CAPN1-218ENST00000530442 RPL19P84098 196 aaKnown RBP7.77□□□□□ -1.17
CAPN1-218ENST00000530442 CEMP1Q6PRD7 247 aaPredicted RBP7.77□□□□□ -1.17
CAPN1-218ENST00000530442 C9orf85Q96MD7 179 aa7.77□□□□□ -1.17
CAPN1-218ENST00000530442 NACAE9PAV3 2078 aa7.77□□□□□ -1.17
CAPN1-218ENST00000530442 VPS13DQ5THJ4 4388 aa7.76□□□□□ -1.17
CAPN1-218ENST00000530442 TMSB15BA0A087X1C1 80 aa7.76□□□□□ -1.17
CAPN1-218ENST00000530442 DEFB131BA0A096LNP1 70 aa7.76□□□□□ -1.17
CAPN1-218ENST00000530442 C19orf71A6NCJ1 209 aa7.76□□□□□ -1.17
CAPN1-218ENST00000530442 GRIFINA4D1Z8 144 aa7.75□□□□□ -1.17
CAPN1-218ENST00000530442 H3BVH4 76 aa7.75□□□□□ -1.17
CAPN1-218ENST00000530442 HTN3P15516 51 aa7.75□□□□□ -1.17
CAPN1-218ENST00000530442 ASIPP42127 132 aa7.75□□□□□ -1.17
CAPN1-218ENST00000530442 OR5I1Q13606 314 aa7.75□□□□□ -1.17
CAPN1-218ENST00000530442 PEA15Q15121 130 aa7.75□□□□□ -1.17
CAPN1-218ENST00000530442 LGALS9BQ3B8N2 356 aa7.75□□□□□ -1.17
CAPN1-218ENST00000530442 DNLZQ5SXM8 178 aa7.75□□□□□ -1.17
CAPN1-218ENST00000530442 C18orf15Q96N68 181 aa7.75□□□□□ -1.17
CAPN1-218ENST00000530442 SMIM7Q9BQ49 75 aa7.75□□□□□ -1.17
CAPN1-218ENST00000530442 SPXQ9BT56 116 aa7.75□□□□□ -1.17
CAPN1-218ENST00000530442 SMDT1Q9H4I9 107 aa7.75□□□□□ -1.17
CAPN1-218ENST00000530442 RYR2Q92736 4967 aa7.75□□□□□ -1.17
CAPN1-218ENST00000530442 HYDINQ4G0P3 5121 aa7.75□□□□□ -1.17
CAPN1-218ENST00000530442 TRGV2A0A075B6R0 118 aa7.74□□□□□ -1.17
CAPN1-218ENST00000530442 ZNF727A8MUV8 499 aa7.74□□□□□ -1.17
CAPN1-218ENST00000530442 M0R2P5 195 aa7.74□□□□□ -1.17
CAPN1-218ENST00000530442 ATP5G1P05496 136 aa7.74□□□□□ -1.17
CAPN1-218ENST00000530442 CXCL1P09341 107 aa7.74□□□□□ -1.17
CAPN1-218ENST00000530442 S100A4P26447 101 aaKnown RBP7.74□□□□□ -1.17
CAPN1-218ENST00000530442 OCC1Q8TAD7 63 aa7.74□□□□□ -1.17
CAPN1-218ENST00000530442 RASL10AQ92737 203 aa7.74□□□□□ -1.17
CAPN1-218ENST00000530442 IL36BQ9NZH7 164 aa7.74□□□□□ -1.17
CAPN1-218ENST00000530442 HOXA5P20719 270 aa7.73□□□□□ -1.17
CAPN1-218ENST00000530442 LINC01551Q86U37 167 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms