RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 SLX1AQ9BQ83 275 aa6.36□□□□□ -1.39
CTNND1-220ENST00000529526 KMT2EQ8IZD2 1858 aa6.36□□□□□ -1.39
CTNND1-220ENST00000529526 IGKV1OR2-108A0A075B7D4 117 aa6.36□□□□□ -1.39
CTNND1-220ENST00000529526 TINCRA0A1B0GVN0 87 aa6.36□□□□□ -1.39
CTNND1-220ENST00000529526 K7EP34 96 aa6.36□□□□□ -1.39
CTNND1-220ENST00000529526 HAMPP81172 84 aa6.36□□□□□ -1.39
CTNND1-220ENST00000529526 IL15RAQ13261 267 aa6.36□□□□□ -1.39
CTNND1-220ENST00000529526 CDPF1Q6NVV7 123 aa6.36□□□□□ -1.39
CTNND1-220ENST00000529526 RPL39LQ96EH5 51 aaKnown RBP6.36□□□□□ -1.39
CTNND1-220ENST00000529526 C20orf78Q9BR46 151 aa6.36□□□□□ -1.39
CTNND1-220ENST00000529526 PRO1854Q9UHT4 67 aa6.36□□□□□ -1.39
CTNND1-220ENST00000529526 KLF2Q9Y5W3 355 aaPredicted RBP6.36□□□□□ -1.39
CTNND1-220ENST00000529526 CENPVL3A0A0U1RRI6 287 aa6.36□□□□□ -1.39
CTNND1-220ENST00000529526 ETDBQ3ZM63 59 aa6.36□□□□□ -1.39
CTNND1-220ENST00000529526 CARD19Q96LW7 228 aa6.36□□□□□ -1.39
CTNND1-220ENST00000529526 TRBV20-1A0A075B6N2 111 aa6.36□□□□□ -1.39
CTNND1-220ENST00000529526 A0A1W2PPM0 123 aa6.36□□□□□ -1.39
CTNND1-220ENST00000529526 H3BMG7 143 aa6.36□□□□□ -1.39
CTNND1-220ENST00000529526 H3BUA1 57 aa6.36□□□□□ -1.39
CTNND1-220ENST00000529526 CGB7P0DN87 165 aa6.36□□□□□ -1.39
CTNND1-220ENST00000529526 DOCK11Q5JSL3 2073 aa6.35□□□□□ -1.39
CTNND1-220ENST00000529526 IGKV2D-24A0A075B6R9 120 aa6.35□□□□□ -1.39
CTNND1-220ENST00000529526 C8orf31Q8N9H6 132 aa6.35□□□□□ -1.39
CTNND1-220ENST00000529526 WIPF2Q8TF74 440 aaPredicted RBP6.35□□□□□ -1.39
CTNND1-220ENST00000529526 ZNF407Q9C0G0 2248 aa6.35□□□□□ -1.39
CTNND1-220ENST00000529526 IGHV7-81A0A0B4J1V7 117 aa6.35□□□□□ -1.39
CTNND1-220ENST00000529526 BLCAPP62952 87 aa6.35□□□□□ -1.39
CTNND1-220ENST00000529526 AMTNQ6UX39 209 aa6.35□□□□□ -1.39
CTNND1-220ENST00000529526 EP300Q09472 2414 aaPredicted RBP6.35□□□□□ -1.39
CTNND1-220ENST00000529526 PRSS47A8MTI9 375 aa6.35□□□□□ -1.39
CTNND1-220ENST00000529526 KRTAP27-1Q3LI81 207 aa6.35□□□□□ -1.39
CTNND1-220ENST00000529526 COL6A6A6NMZ7 2263 aa6.35□□□□□ -1.39
CTNND1-220ENST00000529526 I3L2K1 104 aa6.35□□□□□ -1.39
CTNND1-220ENST00000529526 Q9HAA7 133 aa6.35□□□□□ -1.39
CTNND1-220ENST00000529526 DOCK9Q9BZ29 2069 aa6.35□□□□□ -1.39
CTNND1-220ENST00000529526 NOTCH4Q99466 2003 aa6.35□□□□□ -1.39
CTNND1-220ENST00000529526 NUP210Q8TEM1 1887 aaPredicted RBP6.35□□□□□ -1.39
CTNND1-220ENST00000529526 DENND4CQ5VZ89 1909 aa6.34□□□□□ -1.39
CTNND1-220ENST00000529526 INAFM2P0DMQ5 153 aa6.34□□□□□ -1.39
CTNND1-220ENST00000529526 C5orf47Q569G3 176 aa6.34□□□□□ -1.39
CTNND1-220ENST00000529526 DEFB105AQ8NG35 78 aa6.34□□□□□ -1.39
CTNND1-220ENST00000529526 PPDPFLQ8WWR9 84 aa6.34□□□□□ -1.39
CTNND1-220ENST00000529526 AJUBAQ96IF1 538 aa6.34□□□□□ -1.39
CTNND1-220ENST00000529526 DKK4Q9UBT3 224 aa6.34□□□□□ -1.39
CTNND1-220ENST00000529526 RS1O15537 224 aa6.34□□□□□ -1.39
CTNND1-220ENST00000529526 CRYGCP07315 174 aa6.34□□□□□ -1.39
CTNND1-220ENST00000529526 RHOHQ15669 191 aa6.34□□□□□ -1.39
CTNND1-220ENST00000529526 Q6ZVH6 145 aa6.34□□□□□ -1.39
CTNND1-220ENST00000529526 PCP2Q8IVA1 136 aa6.34□□□□□ -1.39
CTNND1-220ENST00000529526 NPBQ8NG41 125 aa6.34□□□□□ -1.39
CTNND1-220ENST00000529526 IGHV4-4A0A075B6R2 117 aa6.34□□□□□ -1.39
CTNND1-220ENST00000529526 F8W1H4 67 aa6.34□□□□□ -1.39
CTNND1-220ENST00000529526 K7EP13 123 aa6.34□□□□□ -1.39
CTNND1-220ENST00000529526 TAL2Q16559 108 aa6.34□□□□□ -1.39
CTNND1-220ENST00000529526 DEFB113Q30KQ7 82 aa6.34□□□□□ -1.39
CTNND1-220ENST00000529526 TRAV13-2A0A0B4J235 113 aa6.34□□□□□ -1.4
CTNND1-220ENST00000529526 RBAKDNA6NC62 111 aa6.34□□□□□ -1.4
CTNND1-220ENST00000529526 TRACP01848 142 aa6.34□□□□□ -1.4
CTNND1-220ENST00000529526 Q8NFD4 153 aa6.34□□□□□ -1.4
CTNND1-220ENST00000529526 DSCR8Q96T75 97 aa6.34□□□□□ -1.4
CTNND1-220ENST00000529526 K7EIM0 57 aa6.33□□□□□ -1.4
CTNND1-220ENST00000529526 GP9P14770 177 aa6.33□□□□□ -1.4
CTNND1-220ENST00000529526 C12orf74Q32Q52 190 aa6.33□□□□□ -1.4
CTNND1-220ENST00000529526 ZNF747Q9BV97 191 aa6.33□□□□□ -1.4
CTNND1-220ENST00000529526 Q9H8V8 135 aa6.33□□□□□ -1.4
CTNND1-220ENST00000529526 MSRB1Q9NZV6 116 aa6.33□□□□□ -1.4
CTNND1-220ENST00000529526 KIF26AQ9ULI4 1882 aaPredicted RBP6.33□□□□□ -1.4
CTNND1-220ENST00000529526 ESM1Q9NQ30 184 aa6.33□□□□□ -1.4
CTNND1-220ENST00000529526 GVINP1Q7Z2Y8 2422 aa6.33□□□□□ -1.4
CTNND1-220ENST00000529526 DOCK7Q96N67 2140 aa6.33□□□□□ -1.4
CTNND1-220ENST00000529526 K7EMI3 77 aa6.33□□□□□ -1.4
CTNND1-220ENST00000529526 ADORA2A-AS1P86434 159 aa6.33□□□□□ -1.4
CTNND1-220ENST00000529526 IGFL2Q6UWQ7 119 aa6.33□□□□□ -1.4
CTNND1-220ENST00000529526 PATE2Q6UY27 113 aa6.33□□□□□ -1.4
CTNND1-220ENST00000529526 LINC00173Q6ZV60 143 aa6.33□□□□□ -1.4
CTNND1-220ENST00000529526 C5orf38Q86SI9 138 aa6.33□□□□□ -1.4
CTNND1-220ENST00000529526 LYPD6BQ8NI32 183 aa6.33□□□□□ -1.4
CTNND1-220ENST00000529526 C1orf43Q9BWL3 253 aa6.33□□□□□ -1.4
CTNND1-220ENST00000529526 UBL5Q9BZL1 73 aa6.33□□□□□ -1.4
CTNND1-220ENST00000529526 PLA2G2EQ9NZK7 142 aa6.33□□□□□ -1.4
CTNND1-220ENST00000529526 SPTBN2O15020 2390 aa6.32□□□□□ -1.4
CTNND1-220ENST00000529526 IGLV10-54A0A075B6I4 117 aa6.32□□□□□ -1.4
CTNND1-220ENST00000529526 SRSF2Q01130 221 aaKnown RBP6.32□□□□□ -1.4
CTNND1-220ENST00000529526 ZNF493Q6ZR52 646 aa6.32□□□□□ -1.4
CTNND1-220ENST00000529526 IGHG4P01861 327 aa6.32□□□□□ -1.4
CTNND1-220ENST00000529526 RMI2Q96E14 147 aa6.32□□□□□ -1.4
CTNND1-220ENST00000529526 ZMAT4Q9H898 229 aa6.32□□□□□ -1.4
CTNND1-220ENST00000529526 CNOT1A5YKK6 2376 aaKnown RBP6.32□□□□□ -1.4
CTNND1-220ENST00000529526 IGLV11-55A0A075B6I3 123 aa6.32□□□□□ -1.4
CTNND1-220ENST00000529526 IGHV4OR15-8A0A075B7B6 117 aa6.32□□□□□ -1.4
CTNND1-220ENST00000529526 A0A087WW49 117 aa6.32□□□□□ -1.4
CTNND1-220ENST00000529526 BOD1L2Q8IYS8 172 aa6.32□□□□□ -1.4
CTNND1-220ENST00000529526 CLPSL1A2RUU4 121 aa6.32□□□□□ -1.4
CTNND1-220ENST00000529526 NUPR1O60356 82 aa6.32□□□□□ -1.4
CTNND1-220ENST00000529526 CTSGP08311 255 aa6.32□□□□□ -1.4
CTNND1-220ENST00000529526 RPL18AQ02543 176 aaKnown RBP6.32□□□□□ -1.4
CTNND1-220ENST00000529526 USF3Q68DE3 2245 aa6.31□□□□□ -1.4
CTNND1-220ENST00000529526 PRAC2D3DTV9 90 aa6.31□□□□□ -1.4
CTNND1-220ENST00000529526 C15orf53Q8NAA6 179 aa6.31□□□□□ -1.4
CTNND1-220ENST00000529526 ARFGEF3Q5TH69 2177 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms