RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 MYO7AQ13402 2215 aa2.04□□□□□ -2.08
CTR9-204ENST00000529355 CDK5R1Q15078 307 aa2.04□□□□□ -2.08
CTR9-204ENST00000529355 SPRNQ5BIV9 151 aa2.04□□□□□ -2.08
CTR9-204ENST00000529355 KIAA2026Q5HYC2 2103 aa2.04□□□□□ -2.08
CTR9-204ENST00000529355 ERCC6L2Q5T890 1561 aa2.04□□□□□ -2.08
CTR9-204ENST00000529355 C22orf39Q6P5X5 142 aa2.04□□□□□ -2.08
CTR9-204ENST00000529355 NRAPQ86VF7 1730 aa2.04□□□□□ -2.08
CTR9-204ENST00000529355 LHFPL1Q86WI0 220 aa2.04□□□□□ -2.08
CTR9-204ENST00000529355 OR2T10Q8NGZ9 312 aa2.04□□□□□ -2.08
CTR9-204ENST00000529355 MYOZ3Q8TDC0 251 aa2.04□□□□□ -2.08
CTR9-204ENST00000529355 LSM10Q969L4 123 aaKnown RBP2.04□□□□□ -2.08
CTR9-204ENST00000529355 SLC25A44Q96H78 314 aaPredicted RBP2.04□□□□□ -2.08
CTR9-204ENST00000529355 FAM19A4Q96LR4 140 aa2.04□□□□□ -2.08
CTR9-204ENST00000529355 NMNAT3Q96T66 252 aa2.04□□□□□ -2.08
CTR9-204ENST00000529355 MGST2Q99735 147 aa2.04□□□□□ -2.08
CTR9-204ENST00000529355 NMES1Q9C002 83 aa2.04□□□□□ -2.08
CTR9-204ENST00000529355 AGPAT4-IT1Q9H0P7 198 aa2.04□□□□□ -2.08
CTR9-204ENST00000529355 MANBALQ9NQG1 85 aa2.04□□□□□ -2.08
CTR9-204ENST00000529355 SLC39A9Q9NUM3 307 aa2.04□□□□□ -2.08
CTR9-204ENST00000529355 SCN3AQ9NY46 2000 aa2.04□□□□□ -2.08
CTR9-204ENST00000529355 RPUSD1Q9UJJ7 312 aaKnown RBP2.04□□□□□ -2.08
CTR9-204ENST00000529355 ADAMTS7Q9UKP4 1686 aa2.04□□□□□ -2.08
CTR9-204ENST00000529355 LSM2Q9Y333 95 aaKnown RBP2.04□□□□□ -2.08
CTR9-204ENST00000529355 TRAPPC1Q9Y5R8 145 aa2.04□□□□□ -2.08
CTR9-204ENST00000529355 PXMP4Q9Y6I8 212 aa2.04□□□□□ -2.08
CTR9-204ENST00000529355 SERP1Q9Y6X1 66 aa2.04□□□□□ -2.08
CTR9-204ENST00000529355 ATG2BQ96BY7 2078 aa2.03□□□□□ -2.08
CTR9-204ENST00000529355 DSPPQ9NZW4 1301 aa2.03□□□□□ -2.08
CTR9-204ENST00000529355 TRBV7-7A0A0K0K1E9 115 aa2.03□□□□□ -2.08
CTR9-204ENST00000529355 LOC107986453A0A1B0GWG9 222 aa2.03□□□□□ -2.08
CTR9-204ENST00000529355 C9JQL5 133 aa2.03□□□□□ -2.08
CTR9-204ENST00000529355 ATOX1O00244 68 aa2.03□□□□□ -2.08
CTR9-204ENST00000529355 NDUFS5O43920 106 aa2.03□□□□□ -2.08
CTR9-204ENST00000529355 CST7O76096 145 aa2.03□□□□□ -2.08
CTR9-204ENST00000529355 SOD1P00441 154 aa2.03□□□□□ -2.08
CTR9-204ENST00000529355 CD3DP04234 171 aa2.03□□□□□ -2.08
CTR9-204ENST00000529355 IGKV5-2P06315 115 aa2.03□□□□□ -2.08
CTR9-204ENST00000529355 SRP19P09132 144 aaKnown RBP2.03□□□□□ -2.08
CTR9-204ENST00000529355 FKBP2P26885 142 aaKnown RBP2.03□□□□□ -2.08
CTR9-204ENST00000529355 IL3RAP26951 378 aa2.03□□□□□ -2.08
CTR9-204ENST00000529355 MPV17P39210 176 aa2.03□□□□□ -2.08
CTR9-204ENST00000529355 ATP5EP56381 51 aaPredicted RBP2.03□□□□□ -2.08
CTR9-204ENST00000529355 FKBP1AP62942 108 aaKnown RBP2.03□□□□□ -2.08
CTR9-204ENST00000529355 QRFPP83859 136 aa2.03□□□□□ -2.08
CTR9-204ENST00000529355 LINC00303Q3SY05 128 aa2.03□□□□□ -2.08
CTR9-204ENST00000529355 ETDBQ3ZM63 59 aa2.03□□□□□ -2.08
CTR9-204ENST00000529355 DGAT2L6Q6ZPD8 337 aa2.03□□□□□ -2.08
CTR9-204ENST00000529355 DAZ4Q86SG3 579 aaKnown RBP2.03□□□□□ -2.08
CTR9-204ENST00000529355 TEN1Q86WV5 123 aa2.03□□□□□ -2.08
CTR9-204ENST00000529355 BAGE3Q86Y29 109 aa2.03□□□□□ -2.08
CTR9-204ENST00000529355 BAGE2Q86Y30 109 aa2.03□□□□□ -2.08
CTR9-204ENST00000529355 OR8B3Q8NGG8 313 aa2.03□□□□□ -2.08
CTR9-204ENST00000529355 PPP1R1CQ8WVI7 109 aa2.03□□□□□ -2.08
CTR9-204ENST00000529355 AQP3Q92482 292 aa2.03□□□□□ -2.08
CTR9-204ENST00000529355 C20orf78Q9BR46 151 aa2.03□□□□□ -2.08
CTR9-204ENST00000529355 GNB1LQ9BYB4 327 aa2.03□□□□□ -2.08
CTR9-204ENST00000529355 AICDAQ9GZX7 198 aa2.03□□□□□ -2.08
CTR9-204ENST00000529355 DAZ1Q9NQZ3 744 aaKnown RBP2.03□□□□□ -2.08
CTR9-204ENST00000529355 TAAR3PQ9P1P4 343 aa2.03□□□□□ -2.08
CTR9-204ENST00000529355 PCTPQ9UKL6 214 aa2.03□□□□□ -2.08
CTR9-204ENST00000529355 ZNF407Q9C0G0 2248 aa2.03□□□□□ -2.08
CTR9-204ENST00000529355 NCOA6Q14686 2063 aaPredicted RBP2.03□□□□□ -2.08
CTR9-204ENST00000529355 KIAA1549Q9HCM3 1950 aa2.03□□□□□ -2.08
CTR9-204ENST00000529355 PLXNB3Q9ULL4 1909 aa2.03□□□□□ -2.08
CTR9-204ENST00000529355 DOT1LQ8TEK3 1739 aa2.03□□□□□ -2.09
CTR9-204ENST00000529355 ADGRB1O14514 1584 aa2.02□□□□□ -2.09
CTR9-204ENST00000529355 TRGV5A0A0B4J1U4 118 aa2.02□□□□□ -2.09
CTR9-204ENST00000529355 TRAV1-1A0A0B4J248 108 aa2.02□□□□□ -2.09
CTR9-204ENST00000529355 IGHV1-58A0A0C4DH39 117 aa2.02□□□□□ -2.09
CTR9-204ENST00000529355 ZNF727A8MUV8 499 aa2.02□□□□□ -2.09
CTR9-204ENST00000529355 NDUFB3O43676 98 aa2.02□□□□□ -2.09
CTR9-204ENST00000529355 PGLYRP1O75594 196 aaPredicted RBP2.02□□□□□ -2.09
CTR9-204ENST00000529355 IGHV3-7P01780 117 aa2.02□□□□□ -2.09
CTR9-204ENST00000529355 GYPBP06028 91 aa2.02□□□□□ -2.09
CTR9-204ENST00000529355 COX8AP10176 69 aa2.02□□□□□ -2.09
CTR9-204ENST00000529355 HRES1P13985 223 aa2.02□□□□□ -2.09
CTR9-204ENST00000529355 LGALS3P17931 250 aaKnown RBP2.02□□□□□ -2.09
CTR9-204ENST00000529355 CBLN1P23435 193 aa2.02□□□□□ -2.09
CTR9-204ENST00000529355 NPC2P61916 151 aa2.02□□□□□ -2.09
CTR9-204ENST00000529355 UBE2G1P62253 170 aa2.02□□□□□ -2.09
CTR9-204ENST00000529355 SNRPGP62308 76 aaKnown RBP2.02□□□□□ -2.09
CTR9-204ENST00000529355 CST6Q15828 149 aa2.02□□□□□ -2.09
CTR9-204ENST00000529355 NMSQ5H8A3 153 aa2.02□□□□□ -2.09
CTR9-204ENST00000529355 C1orf140Q5VVS0 124 aa2.02□□□□□ -2.09
CTR9-204ENST00000529355 ZCCHC23Q6ZST2 131 aa2.02□□□□□ -2.09
CTR9-204ENST00000529355 CYP2G1PQ6ZSU1 146 aa2.02□□□□□ -2.09
CTR9-204ENST00000529355 LINC00305Q7Z4B0 112 aa2.02□□□□□ -2.09
CTR9-204ENST00000529355 AMN1Q8IY45 258 aa2.02□□□□□ -2.09
CTR9-204ENST00000529355 SLC25A29Q8N8R3 303 aa2.02□□□□□ -2.09
CTR9-204ENST00000529355 LY6G5BQ8NDX9 201 aa2.02□□□□□ -2.09
CTR9-204ENST00000529355 FAM213BQ8TBF2 198 aa2.02□□□□□ -2.09
CTR9-204ENST00000529355 STAG3L4Q8TBR4 150 aa2.02□□□□□ -2.09
CTR9-204ENST00000529355 BRK1Q8WUW1 75 aa2.02□□□□□ -2.09
CTR9-204ENST00000529355 C2orf50Q96LR7 162 aa2.02□□□□□ -2.09
CTR9-204ENST00000529355 IGF2BP2-AS1Q96M15 143 aa2.02□□□□□ -2.09
CTR9-204ENST00000529355 METTL26Q96S19 204 aa2.02□□□□□ -2.09
CTR9-204ENST00000529355 GPX7Q96SL4 187 aaPredicted RBP2.02□□□□□ -2.09
CTR9-204ENST00000529355 PRSS27Q9BQR3 290 aa2.02□□□□□ -2.09
CTR9-204ENST00000529355 FAM60AQ9NP50 221 aa2.02□□□□□ -2.09
CTR9-204ENST00000529355 CKLFQ9UBR5 152 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms