RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 IGHV4-59P01825 116 aa8.94□□□□□ -0.98
USF1-208ENST00000528768 PPBPP02775 128 aa8.94□□□□□ -0.98
USF1-208ENST00000528768 C3orf79P0CE67 100 aa8.94□□□□□ -0.98
USF1-208ENST00000528768 IGLC6P0CF74 106 aa8.94□□□□□ -0.98
USF1-208ENST00000528768 RPL11P62913 178 aaKnown RBP8.94□□□□□ -0.98
USF1-208ENST00000528768 FOXE3Q13461 319 aa8.94□□□□□ -0.98
USF1-208ENST00000528768 BEAN1Q3B7T3 259 aa8.94□□□□□ -0.98
USF1-208ENST00000528768 FAM104BQ5XKR9 115 aa8.94□□□□□ -0.98
USF1-208ENST00000528768 GPHB5Q86YW7 130 aa8.94□□□□□ -0.98
USF1-208ENST00000528768 ORMDL3Q8N138 153 aa8.94□□□□□ -0.98
USF1-208ENST00000528768 FAM19A2Q8N3H0 131 aa8.94□□□□□ -0.98
USF1-208ENST00000528768 RNF182Q8N6D2 247 aa8.94□□□□□ -0.98
USF1-208ENST00000528768 TRBV7-9A0A0J9YWB2 115 aa8.93□□□□□ -0.98
USF1-208ENST00000528768 PRAC2D3DTV9 90 aa8.93□□□□□ -0.98
USF1-208ENST00000528768 LEPROTL1O95214 131 aa8.93□□□□□ -0.98
USF1-208ENST00000528768 ELANEP08246 267 aa8.93□□□□□ -0.98
USF1-208ENST00000528768 CACNG7P62955 275 aa8.93□□□□□ -0.98
USF1-208ENST00000528768 Q6YL49 198 aa8.93□□□□□ -0.98
USF1-208ENST00000528768 MRPL52Q86TS9 123 aaKnown RBP8.93□□□□□ -0.98
USF1-208ENST00000528768 TMEM70Q9BUB7 260 aa8.93□□□□□ -0.98
USF1-208ENST00000528768 KLK15Q9H2R5 256 aa8.93□□□□□ -0.98
USF1-208ENST00000528768 SMPXQ9UHP9 88 aa8.93□□□□□ -0.98
USF1-208ENST00000528768 LAMTOR2Q9Y2Q5 125 aa8.93□□□□□ -0.98
USF1-208ENST00000528768 ZNF80P51504 273 aaPredicted RBP8.92□□□□□ -0.98
USF1-208ENST00000528768 UNQ9165/PRO28630Q6UXU0 137 aa8.92□□□□□ -0.98
USF1-208ENST00000528768 C14orf144Q96I85 54 aa8.92□□□□□ -0.98
USF1-208ENST00000528768 PRELID3AQ96N28 172 aa8.92□□□□□ -0.98
USF1-208ENST00000528768 MIEN1Q9BRT3 115 aa8.92□□□□□ -0.98
USF1-208ENST00000528768 RHPN1-AS1Q9BWJ2 59 aa8.92□□□□□ -0.98
USF1-208ENST00000528768 MAP1LC3CQ9BXW4 147 aa8.92□□□□□ -0.98
USF1-208ENST00000528768 CNFNQ9BYD5 112 aa8.92□□□□□ -0.98
USF1-208ENST00000528768 TMEM191AQ9H0A3 160 aa8.92□□□□□ -0.98
USF1-208ENST00000528768 AP5S1Q9NUS5 200 aa8.92□□□□□ -0.98
USF1-208ENST00000528768 RNF114Q9Y508 228 aa8.92□□□□□ -0.98
USF1-208ENST00000528768 U3KQK5 164 aa8.92□□□□□ -0.98
USF1-208ENST00000528768 TRAV21A0A0B4J279 112 aa8.91□□□□□ -0.98
USF1-208ENST00000528768 HOXA3O43365 443 aaPredicted RBP8.91□□□□□ -0.98
USF1-208ENST00000528768 TRBV12-3P01733 135 aa8.91□□□□□ -0.98
USF1-208ENST00000528768 PSMB8P28062 276 aa8.91□□□□□ -0.98
USF1-208ENST00000528768 CKS2P33552 79 aa8.91□□□□□ -0.98
USF1-208ENST00000528768 OR10AG1Q8NH19 301 aa8.91□□□□□ -0.98
USF1-208ENST00000528768 IGHV1-24A0A0C4DH33 117 aa8.9□□□□□ -0.98
USF1-208ENST00000528768 PET117Q6UWS5 81 aa8.9□□□□□ -0.98
USF1-208ENST00000528768 ZNF705AQ6ZN79 300 aaPredicted RBP8.9□□□□□ -0.98
USF1-208ENST00000528768 MRAPQ8TCY5 172 aa8.9□□□□□ -0.98
USF1-208ENST00000528768 PAM16Q9Y3D7 125 aa8.9□□□□□ -0.98
USF1-208ENST00000528768 TMEM213A2RRL7 107 aa8.89□□□□□ -0.99
USF1-208ENST00000528768 HSBP1L1C9JCN9 74 aa8.89□□□□□ -0.99
USF1-208ENST00000528768 D6R8Y8 96 aa8.89□□□□□ -0.99
USF1-208ENST00000528768 M0R143 59 aa8.89□□□□□ -0.99
USF1-208ENST00000528768 SOCS3O14543 225 aa8.89□□□□□ -0.99
USF1-208ENST00000528768 CSN3P07498 182 aa8.89□□□□□ -0.99
USF1-208ENST00000528768 PRB4P10163 310 aaPredicted RBP8.89□□□□□ -0.99
USF1-208ENST00000528768 CD33P20138 364 aa8.89□□□□□ -0.99
USF1-208ENST00000528768 MRPL51Q4U2R6 128 aaKnown RBP8.89□□□□□ -0.99
USF1-208ENST00000528768 SPATA45Q537H7 98 aa8.89□□□□□ -0.99
USF1-208ENST00000528768 TM4SF20Q53R12 229 aa8.89□□□□□ -0.99
USF1-208ENST00000528768 SAMD5Q5TGI4 173 aa8.89□□□□□ -0.99
USF1-208ENST00000528768 AMN1Q8IY45 258 aa8.89□□□□□ -0.99
USF1-208ENST00000528768 MAP1LC3AQ9H492 121 aa8.89□□□□□ -0.99
USF1-208ENST00000528768 UQCR10Q9UDW1 63 aa8.89□□□□□ -0.99
USF1-208ENST00000528768 TRAV9-2A0A087WT02 112 aa8.88□□□□□ -0.99
USF1-208ENST00000528768 G3V4G9 280 aa8.88□□□□□ -0.99
USF1-208ENST00000528768 LGALS9O00182 355 aa8.88□□□□□ -0.99
USF1-208ENST00000528768 LGALS1P09382 135 aaKnown RBP8.88□□□□□ -0.99
USF1-208ENST00000528768 MED14OSP0DP75 135 aa8.88□□□□□ -0.99
USF1-208ENST00000528768 PROK1P58294 105 aa8.88□□□□□ -0.99
USF1-208ENST00000528768 EBLN2Q6P2I7 272 aa8.88□□□□□ -0.99
USF1-208ENST00000528768 Q6ZS46 218 aa8.88□□□□□ -0.99
USF1-208ENST00000528768 Q8N976 141 aa8.88□□□□□ -0.99
USF1-208ENST00000528768 OR8A1Q8NGG7 326 aa8.88□□□□□ -0.99
USF1-208ENST00000528768 LINC01006Q8NI28 216 aa8.88□□□□□ -0.99
USF1-208ENST00000528768 URB1-AS1Q96HZ7 61 aa8.88□□□□□ -0.99
USF1-208ENST00000528768 UBE2E2Q96LR5 201 aa8.88□□□□□ -0.99
USF1-208ENST00000528768 C2orf70A6NJV1 201 aa8.87□□□□□ -0.99
USF1-208ENST00000528768 SYS1-DBNDD2H3BUS1 97 aa8.87□□□□□ -0.99
USF1-208ENST00000528768 CRXO43186 299 aaPredicted RBP8.87□□□□□ -0.99
USF1-208ENST00000528768 ASIPP42127 132 aa8.87□□□□□ -0.99
USF1-208ENST00000528768 KRTAP10-3P60369 221 aa8.87□□□□□ -0.99
USF1-208ENST00000528768 SSTP61278 116 aa8.87□□□□□ -0.99
USF1-208ENST00000528768 SNRPD3P62318 126 aaKnown RBP8.87□□□□□ -0.99
USF1-208ENST00000528768 SPANXN1Q5VSR9 72 aa8.87□□□□□ -0.99
USF1-208ENST00000528768 C20orf173Q96LM9 149 aa8.87□□□□□ -0.99
USF1-208ENST00000528768 C2orf88Q9BSF0 95 aa8.87□□□□□ -0.99
USF1-208ENST00000528768 NXT2Q9NPJ8 142 aaKnown RBP8.87□□□□□ -0.99
USF1-208ENST00000528768 IGHV4-4A0A075B6R2 117 aa8.86□□□□□ -0.99
USF1-208ENST00000528768 IGKV3D-20A0A0C4DH25 116 aa8.86□□□□□ -0.99
USF1-208ENST00000528768 SNAI2O43623 268 aa8.86□□□□□ -0.99
USF1-208ENST00000528768 S100A4P26447 101 aaKnown RBP8.86□□□□□ -0.99
USF1-208ENST00000528768 LEPP41159 167 aa8.86□□□□□ -0.99
USF1-208ENST00000528768 TMEM95Q3KNT9 176 aa8.85□□□□□ -0.99
USF1-208ENST00000528768 LCNL1Q6ZST4 164 aa8.85□□□□□ -0.99
USF1-208ENST00000528768 RNF152Q8N8N0 203 aa8.85□□□□□ -0.99
USF1-208ENST00000528768 ODF3Q96PU9 254 aa8.85□□□□□ -0.99
USF1-208ENST00000528768 C16orf95Q9H693 158 aa8.85□□□□□ -0.99
USF1-208ENST00000528768 ZNF702PQ9H963 129 aa8.85□□□□□ -0.99
USF1-208ENST00000528768 SIGLEC8Q9NYZ4 499 aa8.85□□□□□ -0.99
USF1-208ENST00000528768 MUC21A0A0G2JKD1 596 aa8.84□□□□□ -0.99
USF1-208ENST00000528768 MUC21A0A140T8X8 626 aa8.84□□□□□ -0.99
USF1-208ENST00000528768 LOC389332A0A1B0GUA5 103 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms