RNA–Protein interactions for RNA: ENST00000528267.1

SCN3B-205, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-205ENST00000528267 GCGP01275 180 aa9.14□□□□□ -0.95
SCN3B-205ENST00000528267 AKR1C3P42330 323 aa9.14□□□□□ -0.95
SCN3B-205ENST00000528267 TMEM183BQ1AE95 376 aa9.14□□□□□ -0.95
SCN3B-205ENST00000528267 ANXA2RQ3ZCQ2 193 aa9.14□□□□□ -0.95
SCN3B-205ENST00000528267 SVBPQ8N300 66 aa9.14□□□□□ -0.95
SCN3B-205ENST00000528267 PHLDA1Q8WV24 401 aaPredicted RBP9.14□□□□□ -0.95
SCN3B-205ENST00000528267 C11orf52Q96A22 123 aa9.14□□□□□ -0.95
SCN3B-205ENST00000528267 ZC2HC1AQ96GY0 325 aa9.14□□□□□ -0.95
SCN3B-205ENST00000528267 DERL1Q9BUN8 251 aa9.14□□□□□ -0.95
SCN3B-205ENST00000528267 TENM2Q9NT68 2774 aa9.13□□□□□ -0.95
SCN3B-205ENST00000528267 K7EQM0 130 aa9.13□□□□□ -0.95
SCN3B-205ENST00000528267 LTAP01374 205 aa9.13□□□□□ -0.95
SCN3B-205ENST00000528267 SPART-AS1P0CW21 52 aa9.13□□□□□ -0.95
SCN3B-205ENST00000528267 COX8CQ7Z4L0 72 aa9.13□□□□□ -0.95
SCN3B-205ENST00000528267 ZNF575Q86XF7 245 aa9.13□□□□□ -0.95
SCN3B-205ENST00000528267 LINC00612Q8N6U2 182 aa9.13□□□□□ -0.95
SCN3B-205ENST00000528267 NHLRC2Q8NBF2 726 aa9.13□□□□□ -0.95
SCN3B-205ENST00000528267 FMC1Q96HJ9 113 aa9.13□□□□□ -0.95
SCN3B-205ENST00000528267 TCEAL7Q9BRU2 100 aa9.13□□□□□ -0.95
SCN3B-205ENST00000528267 PARLQ9H300 379 aa9.13□□□□□ -0.95
SCN3B-205ENST00000528267 NOP10Q9NPE3 64 aaKnown RBP9.13□□□□□ -0.95
SCN3B-205ENST00000528267 GSN-AS1Q9NRJ2 163 aa9.13□□□□□ -0.95
SCN3B-205ENST00000528267 MDFICQ9P1T7 246 aa9.13□□□□□ -0.95
SCN3B-205ENST00000528267 CBY3A6NI87 242 aa9.12□□□□□ -0.95
SCN3B-205ENST00000528267 ZNF727A8MUV8 499 aa9.12□□□□□ -0.95
SCN3B-205ENST00000528267 GNRH2O43555 120 aa9.12□□□□□ -0.95
SCN3B-205ENST00000528267 SNAPINO95295 136 aa9.12□□□□□ -0.95
SCN3B-205ENST00000528267 ZNF674Q2M3X9 581 aa9.12□□□□□ -0.95
SCN3B-205ENST00000528267 FAM74A3Q4VXF1 159 aa9.12□□□□□ -0.95
SCN3B-205ENST00000528267 CEMP1Q6PRD7 247 aaPredicted RBP9.12□□□□□ -0.95
SCN3B-205ENST00000528267 ZNF493Q6ZR52 646 aa9.12□□□□□ -0.95
SCN3B-205ENST00000528267 SMIM7Q9BQ49 75 aa9.12□□□□□ -0.95
SCN3B-205ENST00000528267 NAGKQ9UJ70 344 aa9.12□□□□□ -0.95
SCN3B-205ENST00000528267 TRBV20OR9-2A0A075B6H5 130 aa9.11□□□□□ -0.95
SCN3B-205ENST00000528267 TRAV21A0A0B4J279 112 aa9.11□□□□□ -0.95
SCN3B-205ENST00000528267 IGKV3D-20A0A0C4DH25 116 aa9.11□□□□□ -0.95
SCN3B-205ENST00000528267 FBLL1A6NHQ2 334 aaKnown RBP9.11□□□□□ -0.95
SCN3B-205ENST00000528267 LYRM9A8MSI8 78 aa9.11□□□□□ -0.95
SCN3B-205ENST00000528267 TYMSP04818 313 aa9.11□□□□□ -0.95
SCN3B-205ENST00000528267 PFN1P07737 140 aaKnown RBP9.11□□□□□ -0.95
SCN3B-205ENST00000528267 TCL1AP56279 114 aa9.11□□□□□ -0.95
SCN3B-205ENST00000528267 TDRG1Q3Y452 100 aa9.11□□□□□ -0.95
SCN3B-205ENST00000528267 SMUG1Q53HV7 270 aa9.11□□□□□ -0.95
SCN3B-205ENST00000528267 NDFIP1Q9BT67 221 aa9.11□□□□□ -0.95
SCN3B-205ENST00000528267 MLST8Q9BVC4 326 aa9.11□□□□□ -0.95
SCN3B-205ENST00000528267 MUC4Q99102 2169 aa9.11□□□□□ -0.95
SCN3B-205ENST00000528267 DNAH6Q9C0G6 4158 aa9.1□□□□□ -0.95
SCN3B-205ENST00000528267 M0R036 132 aa9.1□□□□□ -0.95
SCN3B-205ENST00000528267 IGLV2-8P01709 118 aa9.1□□□□□ -0.95
SCN3B-205ENST00000528267 RPL35P42766 123 aaKnown RBP9.1□□□□□ -0.95
SCN3B-205ENST00000528267 UBE2G1P62253 170 aa9.1□□□□□ -0.95
SCN3B-205ENST00000528267 SAPCD1Q5SSQ6 148 aa9.1□□□□□ -0.95
SCN3B-205ENST00000528267 IBA57Q5T440 356 aaKnown RBP9.1□□□□□ -0.95
SCN3B-205ENST00000528267 ATRAIDQ6UW56 229 aa9.1□□□□□ -0.95
SCN3B-205ENST00000528267 Q6ZTI0 123 aa9.1□□□□□ -0.95
SCN3B-205ENST00000528267 TMEM183AQ8IXX5 376 aa9.1□□□□□ -0.95
SCN3B-205ENST00000528267 CLRN3Q8NCR9 226 aa9.1□□□□□ -0.95
SCN3B-205ENST00000528267 TIMM8BQ9Y5J9 83 aaPredicted RBP9.1□□□□□ -0.95
SCN3B-205ENST00000528267 NACAE9PAV3 2078 aa9.09□□□□□ -0.95
SCN3B-205ENST00000528267 IGHV3-16A0A0C4DH30 117 aa9.09□□□□□ -0.95
SCN3B-205ENST00000528267 SPINK4O60575 86 aa9.09□□□□□ -0.95
SCN3B-205ENST00000528267 DEFB130BP0DP73 79 aa9.09□□□□□ -0.95
SCN3B-205ENST00000528267 DEFB130AP0DP74 79 aa9.09□□□□□ -0.95
SCN3B-205ENST00000528267 DAZ2Q13117 558 aaKnown RBP9.09□□□□□ -0.95
SCN3B-205ENST00000528267 TMEM241Q24JQ0 296 aa9.09□□□□□ -0.95
SCN3B-205ENST00000528267 SDF2L1Q9HCN8 221 aa9.09□□□□□ -0.95
SCN3B-205ENST00000528267 NAT8Q9UHE5 227 aa9.09□□□□□ -0.95
SCN3B-205ENST00000528267 ZFP30Q9Y2G7 519 aa9.09□□□□□ -0.95
SCN3B-205ENST00000528267 KMT2AQ03164 3969 aa9.09□□□□□ -0.95
SCN3B-205ENST00000528267 TRAV10A0A0B4J240 114 aa9.08□□□□□ -0.96
SCN3B-205ENST00000528267 NUPR2A6NF83 97 aa9.08□□□□□ -0.96
SCN3B-205ENST00000528267 PGPEP1LA6NFU8 196 aa9.08□□□□□ -0.96
SCN3B-205ENST00000528267 SH2D1AO60880 128 aa9.08□□□□□ -0.96
SCN3B-205ENST00000528267 SCO1O75880 301 aa9.08□□□□□ -0.96
SCN3B-205ENST00000528267 DAD1P61803 113 aa9.08□□□□□ -0.96
SCN3B-205ENST00000528267 PNRC1Q12796 327 aaPredicted RBP9.08□□□□□ -0.96
SCN3B-205ENST00000528267 CENPWQ5EE01 88 aa9.08□□□□□ -0.96
SCN3B-205ENST00000528267 FAM159AQ6UWV7 190 aa9.08□□□□□ -0.96
SCN3B-205ENST00000528267 MRPL16Q9NX20 251 aaKnown RBP9.08□□□□□ -0.96
SCN3B-205ENST00000528267 DEFB131BA0A096LNP1 70 aa9.07□□□□□ -0.96
SCN3B-205ENST00000528267 TEX48A0A1B0GUV7 120 aa9.07□□□□□ -0.96
SCN3B-205ENST00000528267 GAGE12BA1L429 117 aa9.07□□□□□ -0.96
SCN3B-205ENST00000528267 SNURFLB1AK76 121 aa9.07□□□□□ -0.96
SCN3B-205ENST00000528267 GAGE7O76087 117 aa9.07□□□□□ -0.96
SCN3B-205ENST00000528267 GAGE12FP0CL80 117 aa9.07□□□□□ -0.96
SCN3B-205ENST00000528267 GAGE12GP0CL81 117 aa9.07□□□□□ -0.96
SCN3B-205ENST00000528267 GAGE12IP0CL82 117 aa9.07□□□□□ -0.96
SCN3B-205ENST00000528267 RNASE3P12724 160 aaKnown RBP9.07□□□□□ -0.96
SCN3B-205ENST00000528267 ZNF415Q09FC8 603 aa9.07□□□□□ -0.96
SCN3B-205ENST00000528267 RHEBQ15382 184 aa9.07□□□□□ -0.96
SCN3B-205ENST00000528267 BAGE2Q86Y30 109 aa9.07□□□□□ -0.96
SCN3B-205ENST00000528267 TRGV11A0A075B6L2 103 aa9.06□□□□□ -0.96
SCN3B-205ENST00000528267 C7orf77A4D0Y5 90 aa9.06□□□□□ -0.96
SCN3B-205ENST00000528267 C9JCJ5 164 aa9.06□□□□□ -0.96
SCN3B-205ENST00000528267 HTN3P15516 51 aa9.06□□□□□ -0.96
SCN3B-205ENST00000528267 HOXA5P20719 270 aa9.06□□□□□ -0.96
SCN3B-205ENST00000528267 RPL23P62829 140 aaKnown RBP9.06□□□□□ -0.96
SCN3B-205ENST00000528267 RPL19P84098 196 aaKnown RBP9.06□□□□□ -0.96
SCN3B-205ENST00000528267 ADIRFQ15847 76 aa9.06□□□□□ -0.96
SCN3B-205ENST00000528267 C9orf85Q96MD7 179 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms