RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 TCRAP04437 139 aa7.65□□□□□ -1.18
NR1H3-230ENST00000527949 TMEM183BQ1AE95 376 aa7.65□□□□□ -1.18
NR1H3-230ENST00000527949 RGS21Q2M5E4 152 aa7.65□□□□□ -1.18
NR1H3-230ENST00000527949 MUC21Q5SSG8 566 aa7.65□□□□□ -1.18
NR1H3-230ENST00000527949 TMEM183AQ8IXX5 376 aa7.65□□□□□ -1.18
NR1H3-230ENST00000527949 OR2T35Q8NGX2 323 aa7.65□□□□□ -1.18
NR1H3-230ENST00000527949 PTH2Q96A98 100 aa7.65□□□□□ -1.18
NR1H3-230ENST00000527949 HHLA3Q9XRX5 114 aa7.65□□□□□ -1.18
NR1H3-230ENST00000527949 RPL7L1Q6DKI1 246 aaKnown RBP7.64□□□□□ -1.19
NR1H3-230ENST00000527949 NEGR1Q7Z3B1 354 aa7.64□□□□□ -1.19
NR1H3-230ENST00000527949 SH2D6Q7Z4S9 175 aa7.64□□□□□ -1.19
NR1H3-230ENST00000527949 TMEM75Q8N9X5 138 aa7.64□□□□□ -1.19
NR1H3-230ENST00000527949 KRTAP1-5Q9BYS1 174 aa7.64□□□□□ -1.19
NR1H3-230ENST00000527949 NKX6-2Q9C056 277 aaPredicted RBP7.64□□□□□ -1.19
NR1H3-230ENST00000527949 SDF2L1Q9HCN8 221 aa7.64□□□□□ -1.19
NR1H3-230ENST00000527949 EPDR1Q9UM22 224 aa7.64□□□□□ -1.19
NR1H3-230ENST00000527949 FXYD6-FXYD2A0A087WZ82 144 aa7.63□□□□□ -1.19
NR1H3-230ENST00000527949 TRAV8-1A0A0A6YYK1 113 aa7.63□□□□□ -1.19
NR1H3-230ENST00000527949 TRGV4A0A0C4DH28 118 aa7.63□□□□□ -1.19
NR1H3-230ENST00000527949 CTXND1A0A1B0GTU2 59 aa7.63□□□□□ -1.19
NR1H3-230ENST00000527949 EPM2AB3EWF7 344 aa7.63□□□□□ -1.19
NR1H3-230ENST00000527949 GGTLC3B5MD39 225 aa7.63□□□□□ -1.19
NR1H3-230ENST00000527949 G3V3Q6 166 aa7.63□□□□□ -1.19
NR1H3-230ENST00000527949 SIVA1O15304 175 aa7.63□□□□□ -1.19
NR1H3-230ENST00000527949 HMGB3O15347 200 aaKnown RBP7.63□□□□□ -1.19
NR1H3-230ENST00000527949 EIF3GO75821 320 aaKnown RBP eCLIP7.63□□□□□ -1.19
NR1H3-230ENST00000527949 IGLV2-11P01706 119 aa7.63□□□□□ -1.19
NR1H3-230ENST00000527949 TIRAPP58753 221 aa7.63□□□□□ -1.19
NR1H3-230ENST00000527949 SUMO1P63165 101 aaKnown RBP7.63□□□□□ -1.19
NR1H3-230ENST00000527949 GNG5P63218 68 aa7.63□□□□□ -1.19
NR1H3-230ENST00000527949 SAPCD1Q5SSQ6 148 aa7.63□□□□□ -1.19
NR1H3-230ENST00000527949 SPATA12Q7Z6I5 190 aa7.63□□□□□ -1.19
NR1H3-230ENST00000527949 CYB561D1Q8N8Q1 229 aa7.63□□□□□ -1.19
NR1H3-230ENST00000527949 SH3BGRL3Q9H299 93 aa7.63□□□□□ -1.19
NR1H3-230ENST00000527949 RPH3ALQ9UNE2 315 aa7.63□□□□□ -1.19
NR1H3-230ENST00000527949 PSG8Q9UQ74 426 aa7.63□□□□□ -1.19
NR1H3-230ENST00000527949 BOLA1Q9Y3E2 137 aa7.63□□□□□ -1.19
NR1H3-230ENST00000527949 IGHV3-53P01767 116 aa7.62□□□□□ -1.19
NR1H3-230ENST00000527949 TYMSP04818 313 aa7.62□□□□□ -1.19
NR1H3-230ENST00000527949 PFN1P07737 140 aaKnown RBP7.62□□□□□ -1.19
NR1H3-230ENST00000527949 FLI1Q01543 452 aaPredicted RBP7.62□□□□□ -1.19
NR1H3-230ENST00000527949 SMUG1Q53HV7 270 aa7.62□□□□□ -1.19
NR1H3-230ENST00000527949 PIK3CD-AS1Q5SR53 167 aa7.62□□□□□ -1.19
NR1H3-230ENST00000527949 LYPD5Q6UWN5 251 aa7.62□□□□□ -1.19
NR1H3-230ENST00000527949 ZNF479Q96JC4 524 aa7.62□□□□□ -1.19
NR1H3-230ENST00000527949 C8orf49Q96NF6 230 aa7.62□□□□□ -1.19
NR1H3-230ENST00000527949 TCEAL7Q9BRU2 100 aa7.62□□□□□ -1.19
NR1H3-230ENST00000527949 C9JCJ5 164 aa7.61□□□□□ -1.19
NR1H3-230ENST00000527949 F6UZH7 168 aa7.61□□□□□ -1.19
NR1H3-230ENST00000527949 GNRH2O43555 120 aa7.61□□□□□ -1.19
NR1H3-230ENST00000527949 NXPH4O95158 308 aa7.61□□□□□ -1.19
NR1H3-230ENST00000527949 ZNF726P1Q15940 193 aa7.61□□□□□ -1.19
NR1H3-230ENST00000527949 ZFP69Q49AA0 526 aa7.61□□□□□ -1.19
NR1H3-230ENST00000527949 COX8CQ7Z4L0 72 aa7.61□□□□□ -1.19
NR1H3-230ENST00000527949 OR4C5Q8NGB2 326 aa7.61□□□□□ -1.19
NR1H3-230ENST00000527949 HIST1H2BAQ96A08 127 aa7.61□□□□□ -1.19
NR1H3-230ENST00000527949 C9orf85Q96MD7 179 aa7.61□□□□□ -1.19
NR1H3-230ENST00000527949 TXNDC17Q9BRA2 123 aa7.61□□□□□ -1.19
NR1H3-230ENST00000527949 NAGKQ9UJ70 344 aa7.61□□□□□ -1.19
NR1H3-230ENST00000527949 ARL2-SNX15V9GYD0 113 aa7.61□□□□□ -1.19
NR1H3-230ENST00000527949 DYNC1H1Q14204 4646 aaKnown RBP7.61□□□□□ -1.19
NR1H3-230ENST00000527949 HSPG2P98160 4391 aa7.6□□□□□ -1.19
NR1H3-230ENST00000527949 K7EQD1 137 aa7.6□□□□□ -1.19
NR1H3-230ENST00000527949 GCGP01275 180 aa7.6□□□□□ -1.19
NR1H3-230ENST00000527949 SFTA3P0C7M3 94 aa7.6□□□□□ -1.19
NR1H3-230ENST00000527949 GATA1P15976 413 aaPredicted RBP7.6□□□□□ -1.19
NR1H3-230ENST00000527949 SRIP30626 198 aa7.6□□□□□ -1.19
NR1H3-230ENST00000527949 FHITP49789 147 aa7.6□□□□□ -1.19
NR1H3-230ENST00000527949 PPT1P50897 306 aa7.6□□□□□ -1.19
NR1H3-230ENST00000527949 ZNF345Q14585 488 aa7.6□□□□□ -1.19
NR1H3-230ENST00000527949 AKR1C8PQ5T2L2 129 aa7.6□□□□□ -1.19
NR1H3-230ENST00000527949 Q6ZRN7 208 aaPredicted RBP7.6□□□□□ -1.19
NR1H3-230ENST00000527949 PCNPQ8WW12 178 aaKnown RBP7.6□□□□□ -1.19
NR1H3-230ENST00000527949 CYTL1Q9NRR1 136 aa7.6□□□□□ -1.19
NR1H3-230ENST00000527949 TRAV9-2A0A087WT02 112 aa7.59□□□□□ -1.19
NR1H3-230ENST00000527949 TRBV6-1A0A0K0K1D8 114 aa7.59□□□□□ -1.19
NR1H3-230ENST00000527949 RS1O15537 224 aa7.59□□□□□ -1.19
NR1H3-230ENST00000527949 INAFM2P0DMQ5 153 aa7.59□□□□□ -1.19
NR1H3-230ENST00000527949 GYPEP15421 78 aa7.59□□□□□ -1.19
NR1H3-230ENST00000527949 ZNF80P51504 273 aaPredicted RBP7.59□□□□□ -1.19
NR1H3-230ENST00000527949 NFE4Q86UQ8 179 aa7.59□□□□□ -1.19
NR1H3-230ENST00000527949 C11orf21Q9P2W6 132 aa7.59□□□□□ -1.19
NR1H3-230ENST00000527949 TRBV6-4A0A1B0GX49 114 aa7.58□□□□□ -1.2
NR1H3-230ENST00000527949 FAM74A7A6NL05 159 aa7.58□□□□□ -1.2
NR1H3-230ENST00000527949 HMSDA8MTL9 139 aa7.58□□□□□ -1.2
NR1H3-230ENST00000527949 FABP5P3A8MUU1 101 aa7.58□□□□□ -1.2
NR1H3-230ENST00000527949 DNAH10OSP0CZ25 163 aa7.58□□□□□ -1.2
NR1H3-230ENST00000527949 LINC00315P59091 139 aa7.58□□□□□ -1.2
NR1H3-230ENST00000527949 ZNF876PQ49A33 203 aa7.58□□□□□ -1.2
NR1H3-230ENST00000527949 DNLZQ5SXM8 178 aa7.58□□□□□ -1.2
NR1H3-230ENST00000527949 PRNTQ86SH4 94 aa7.58□□□□□ -1.2
NR1H3-230ENST00000527949 KCNRGQ8N5I3 272 aa7.58□□□□□ -1.2
NR1H3-230ENST00000527949 ZFP30Q9Y2G7 519 aa7.58□□□□□ -1.2
NR1H3-230ENST00000527949 MAP1LC3B2A6NCE7 125 aa7.57□□□□□ -1.2
NR1H3-230ENST00000527949 UMAD1C9J7I0 102 aa7.57□□□□□ -1.2
NR1H3-230ENST00000527949 PEX7O00628 323 aa7.57□□□□□ -1.2
NR1H3-230ENST00000527949 ARPC5O15511 151 aa7.57□□□□□ -1.2
NR1H3-230ENST00000527949 IFNA7P01567 189 aa7.57□□□□□ -1.2
NR1H3-230ENST00000527949 SEC11BP0C7V7 166 aa7.57□□□□□ -1.2
NR1H3-230ENST00000527949 RNASE3P12724 160 aaKnown RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms