RNA–Protein interactions for RNA: ENST00000527718.1

PABPC4-222, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 5

Gene PABPC4, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-222	ENST00000527718	SMAD5-AS1	Q9Y6J3	95 aa		4.77	□□□□□ -1.65
PABPC4-222	ENST00000527718	SON	P18583	2426 aa	Known RBP	4.76	□□□□□ -1.65
PABPC4-222	ENST00000527718	ARHGAP32	A7KAX9	2087 aa		4.76	□□□□□ -1.65
PABPC4-222	ENST00000527718	NSD1	Q96L73	2696 aa	Predicted RBP	4.76	□□□□□ -1.65
PABPC4-222	ENST00000527718	IGHV4OR15-8	A0A075B7B6	117 aa		4.76	□□□□□ -1.65
PABPC4-222	ENST00000527718	IGHV3OR16-13	A0A075B7E8	117 aa		4.76	□□□□□ -1.65
PABPC4-222	ENST00000527718	IGHV3OR16-8	A0A075B7F1	116 aa		4.76	□□□□□ -1.65
PABPC4-222	ENST00000527718		A0A087WW49	117 aa		4.76	□□□□□ -1.65
PABPC4-222	ENST00000527718	IGHV3-74	A0A0B4J1X5	117 aa		4.76	□□□□□ -1.65
PABPC4-222	ENST00000527718	C20orf202	A1L168	122 aa		4.76	□□□□□ -1.65
PABPC4-222	ENST00000527718	TMEM213	A2RRL7	107 aa		4.76	□□□□□ -1.65
PABPC4-222	ENST00000527718	CCL24	O00175	119 aa		4.76	□□□□□ -1.65
PABPC4-222	ENST00000527718	HSBP1	O75506	76 aa		4.76	□□□□□ -1.65
PABPC4-222	ENST00000527718	OR5AL1	P0C617	328 aa		4.76	□□□□□ -1.65
PABPC4-222	ENST00000527718	SMIM17	P0DL12	118 aa		4.76	□□□□□ -1.65
PABPC4-222	ENST00000527718	TWIST1	Q15672	202 aa		4.76	□□□□□ -1.65
PABPC4-222	ENST00000527718	IQCJ	Q1A5X6	159 aa		4.76	□□□□□ -1.65
PABPC4-222	ENST00000527718	TCTEX1D4	Q5JR98	221 aa		4.76	□□□□□ -1.65
PABPC4-222	ENST00000527718	SPANXN1	Q5VSR9	72 aa		4.76	□□□□□ -1.65
PABPC4-222	ENST00000527718	TMEM136	Q6ZRR5	245 aa		4.76	□□□□□ -1.65
PABPC4-222	ENST00000527718	NDUFA11	Q86Y39	141 aa		4.76	□□□□□ -1.65
PABPC4-222	ENST00000527718	CHCHD1	Q96BP2	118 aa	Known RBP	4.76	□□□□□ -1.65
PABPC4-222	ENST00000527718	SGK494	Q96LW2	274 aa		4.76	□□□□□ -1.65
PABPC4-222	ENST00000527718	C20orf144	Q9BQM9	153 aa		4.76	□□□□□ -1.65
PABPC4-222	ENST00000527718	ALKBH7	Q9BT30	221 aa	Predicted RBP	4.76	□□□□□ -1.65
PABPC4-222	ENST00000527718	MS4A6A	Q9H2W1	248 aa		4.76	□□□□□ -1.65
PABPC4-222	ENST00000527718	CR1	P17927	2039 aa		4.75	□□□□□ -1.65
PABPC4-222	ENST00000527718	TRGV11	A0A075B6L2	103 aa		4.75	□□□□□ -1.65
PABPC4-222	ENST00000527718	IGHV3-49	A0A0A0MS15	119 aa		4.75	□□□□□ -1.65
PABPC4-222	ENST00000527718	LINC00587	B1AMM8	73 aa		4.75	□□□□□ -1.65
PABPC4-222	ENST00000527718	TMEM238	C9JI98	176 aa		4.75	□□□□□ -1.65
PABPC4-222	ENST00000527718	TCAP	O15273	167 aa		4.75	□□□□□ -1.65
PABPC4-222	ENST00000527718	SAP30	O75446	220 aa		4.75	□□□□□ -1.65
PABPC4-222	ENST00000527718	TRBV12-3	P01733	135 aa		4.75	□□□□□ -1.65
PABPC4-222	ENST00000527718	ESD	P10768	282 aa		4.75	□□□□□ -1.65
PABPC4-222	ENST00000527718	CTRL	P40313	264 aa		4.75	□□□□□ -1.65
PABPC4-222	ENST00000527718	INSL3	P51460	131 aa		4.75	□□□□□ -1.65
PABPC4-222	ENST00000527718	PSMG4	Q5JS54	123 aa		4.75	□□□□□ -1.65
PABPC4-222	ENST00000527718	ZNF493	Q6ZR52	646 aa		4.75	□□□□□ -1.65
PABPC4-222	ENST00000527718	ORMDL3	Q8N138	153 aa		4.75	□□□□□ -1.65
PABPC4-222	ENST00000527718	GATD1	Q8NB37	220 aa		4.75	□□□□□ -1.65
PABPC4-222	ENST00000527718	C12orf57	Q99622	126 aa		4.75	□□□□□ -1.65
PABPC4-222	ENST00000527718	VGLL1	Q99990	258 aa		4.75	□□□□□ -1.65
PABPC4-222	ENST00000527718	MCRIP2	Q9BUT9	160 aa	Known RBP	4.75	□□□□□ -1.65
PABPC4-222	ENST00000527718	CNFN	Q9BYD5	112 aa		4.75	□□□□□ -1.65
PABPC4-222	ENST00000527718	AGPAT4-IT1	Q9H0P7	198 aa		4.75	□□□□□ -1.65
PABPC4-222	ENST00000527718	PHLDA3	Q9Y5J5	127 aa		4.75	□□□□□ -1.65
PABPC4-222	ENST00000527718	TRAV8-2	A0A0B4J237	113 aa		4.74	□□□□□ -1.65
PABPC4-222	ENST00000527718		A0A1B0GXF2	115 aa		4.74	□□□□□ -1.65
PABPC4-222	ENST00000527718	ZNF705F	A8MVS1	300 aa	Predicted RBP	4.74	□□□□□ -1.65
PABPC4-222	ENST00000527718		K7EMI3	77 aa		4.74	□□□□□ -1.65
PABPC4-222	ENST00000527718		K7EQG2	157 aa		4.74	□□□□□ -1.65
PABPC4-222	ENST00000527718	SOCS3	O14543	225 aa		4.74	□□□□□ -1.65
PABPC4-222	ENST00000527718	PHOX2A	O14813	284 aa		4.74	□□□□□ -1.65
PABPC4-222	ENST00000527718	SPINK4	O60575	86 aa		4.74	□□□□□ -1.65
PABPC4-222	ENST00000527718	APOH	P02749	345 aa	Predicted RBP	4.74	□□□□□ -1.65
PABPC4-222	ENST00000527718	LINC00614	P0C842	121 aa		4.74	□□□□□ -1.65
PABPC4-222	ENST00000527718	FABP4	P15090	132 aa		4.74	□□□□□ -1.65
PABPC4-222	ENST00000527718	SRI	P30626	198 aa		4.74	□□□□□ -1.65
PABPC4-222	ENST00000527718	FA2H	Q7L5A8	372 aa		4.74	□□□□□ -1.65
PABPC4-222	ENST00000527718	HIST3H2BB	Q8N257	126 aa		4.74	□□□□□ -1.65
PABPC4-222	ENST00000527718	RNF182	Q8N6D2	247 aa		4.74	□□□□□ -1.65
PABPC4-222	ENST00000527718	LINC01006	Q8NI28	216 aa		4.74	□□□□□ -1.65
PABPC4-222	ENST00000527718	DCANP1	Q8TF63	244 aa		4.74	□□□□□ -1.65
PABPC4-222	ENST00000527718	AP1S3	Q96PC3	154 aa		4.74	□□□□□ -1.65
PABPC4-222	ENST00000527718	FAM110A	Q9BQ89	295 aa		4.74	□□□□□ -1.65
PABPC4-222	ENST00000527718	NDUFAF3	Q9BU61	184 aa		4.74	□□□□□ -1.65
PABPC4-222	ENST00000527718	C1QTNF4	Q9BXJ3	329 aa		4.74	□□□□□ -1.65
PABPC4-222	ENST00000527718	TMEM191A	Q9H0A3	160 aa		4.74	□□□□□ -1.65
PABPC4-222	ENST00000527718	HSPB8	Q9UJY1	196 aa		4.74	□□□□□ -1.65
PABPC4-222	ENST00000527718	HIVEP2	P31629	2446 aa		4.74	□□□□□ -1.65
PABPC4-222	ENST00000527718	ABCA2	Q9BZC7	2435 aa		4.74	□□□□□ -1.65
PABPC4-222	ENST00000527718	PLXNB1	O43157	2135 aa		4.73	□□□□□ -1.65
PABPC4-222	ENST00000527718	IGKV3-7	A0A075B6H7	116 aa		4.73	□□□□□ -1.65
PABPC4-222	ENST00000527718	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	4.73	□□□□□ -1.65
PABPC4-222	ENST00000527718		A0A0J9YX75	114 aa		4.73	□□□□□ -1.65
PABPC4-222	ENST00000527718	C7orf71	A4D174	169 aa		4.73	□□□□□ -1.65
PABPC4-222	ENST00000527718	OR11H12	B2RN74	326 aa		4.73	□□□□□ -1.65
PABPC4-222	ENST00000527718	TSTD3	H0UI37	97 aa		4.73	□□□□□ -1.65
PABPC4-222	ENST00000527718	LY6G6D	O95868	133 aa		4.73	□□□□□ -1.65
PABPC4-222	ENST00000527718	CA1	P00915	261 aa	Predicted RBP	4.73	□□□□□ -1.65
PABPC4-222	ENST00000527718	CKS2	P33552	79 aa		4.73	□□□□□ -1.65
PABPC4-222	ENST00000527718	FHL3	Q13643	280 aa		4.73	□□□□□ -1.65
PABPC4-222	ENST00000527718	LYZL1	Q6UWQ5	148 aa		4.73	□□□□□ -1.65
PABPC4-222	ENST00000527718	APRG1	Q8IVJ8	170 aa		4.73	□□□□□ -1.65
PABPC4-222	ENST00000527718	STH	Q8IWL8	128 aa		4.73	□□□□□ -1.65
PABPC4-222	ENST00000527718	TMEM256	Q8N2U0	113 aa		4.73	□□□□□ -1.65
PABPC4-222	ENST00000527718	PRSS3P2	Q8NHM4	247 aa		4.73	□□□□□ -1.65
PABPC4-222	ENST00000527718		Q8TAT8	98 aa		4.73	□□□□□ -1.65
PABPC4-222	ENST00000527718	RNASE8	Q8TDE3	154 aa	Known RBP	4.73	□□□□□ -1.65
PABPC4-222	ENST00000527718	MRAP2	Q96G30	205 aa		4.73	□□□□□ -1.65
PABPC4-222	ENST00000527718	C8orf49	Q96NF6	230 aa		4.73	□□□□□ -1.65
PABPC4-222	ENST00000527718	MAP1LC3A	Q9H492	121 aa		4.73	□□□□□ -1.65
PABPC4-222	ENST00000527718	GEMIN7	Q9H840	131 aa	Known RBP	4.73	□□□□□ -1.65
PABPC4-222	ENST00000527718	NXT2	Q9NPJ8	142 aa	Known RBP	4.73	□□□□□ -1.65
PABPC4-222	ENST00000527718	TNFRSF18	Q9Y5U5	241 aa		4.73	□□□□□ -1.65
PABPC4-222	ENST00000527718	NF1	P21359	2839 aa		4.73	□□□□□ -1.65
PABPC4-222	ENST00000527718	JMJD1C	Q15652	2540 aa		4.72	□□□□□ -1.65
PABPC4-222	ENST00000527718	IGHV4-4	A0A075B6R2	117 aa		4.72	□□□□□ -1.65
PABPC4-222	ENST00000527718	TMSB15B	A0A087X1C1	80 aa		4.72	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms