RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 U3KQK5 164 aa13.07□□□□□ -0.32
PCDHA6-202ENST00000527624 D6R8Y8 96 aa13.06□□□□□ -0.32
PCDHA6-202ENST00000527624 IGLC6P0CF74 106 aa13.06□□□□□ -0.32
PCDHA6-202ENST00000527624 SRSF2Q01130 221 aaKnown RBP13.06□□□□□ -0.32
PCDHA6-202ENST00000527624 HIST1H1AQ02539 215 aaPredicted RBP13.06□□□□□ -0.32
PCDHA6-202ENST00000527624 LINC01559Q495D7 138 aa13.06□□□□□ -0.32
PCDHA6-202ENST00000527624 PRR9Q5T870 116 aa13.06□□□□□ -0.32
PCDHA6-202ENST00000527624 C18orf65Q6ZTR6 163 aa13.06□□□□□ -0.32
PCDHA6-202ENST00000527624 FA2HQ7L5A8 372 aa13.06□□□□□ -0.32
PCDHA6-202ENST00000527624 Q8N2B8 174 aa13.06□□□□□ -0.32
PCDHA6-202ENST00000527624 MRPS16Q9Y3D3 137 aaKnown RBP13.06□□□□□ -0.32
PCDHA6-202ENST00000527624 IGKV3D-20A0A0C4DH25 116 aa13.05□□□□□ -0.32
PCDHA6-202ENST00000527624 G0S2P27469 103 aa13.05□□□□□ -0.32
PCDHA6-202ENST00000527624 PET117Q6UWS5 81 aa13.05□□□□□ -0.32
PCDHA6-202ENST00000527624 TMEM191AQ9H0A3 160 aa13.05□□□□□ -0.32
PCDHA6-202ENST00000527624 OVOL1O14753 267 aa13.05□□□□□ -0.32
PCDHA6-202ENST00000527624 ZNF25P17030 456 aaPredicted RBP13.05□□□□□ -0.32
PCDHA6-202ENST00000527624 HOXD3P31249 432 aaPredicted RBP13.05□□□□□ -0.32
PCDHA6-202ENST00000527624 TWIST1Q15672 202 aa13.05□□□□□ -0.32
PCDHA6-202ENST00000527624 DEFB136Q30KP8 78 aa13.05□□□□□ -0.32
PCDHA6-202ENST00000527624 IFI27P40305 119 aaPredicted RBP13.04□□□□□ -0.32
PCDHA6-202ENST00000527624 TFPI2P48307 235 aa13.04□□□□□ -0.32
PCDHA6-202ENST00000527624 KRTAP1-1Q07627 177 aa13.04□□□□□ -0.32
PCDHA6-202ENST00000527624 HIST2H2BDQ6DRA6 164 aa13.04□□□□□ -0.32
PCDHA6-202ENST00000527624 ORMDL3Q8N138 153 aa13.04□□□□□ -0.32
PCDHA6-202ENST00000527624 RNF152Q8N8N0 203 aa13.04□□□□□ -0.32
PCDHA6-202ENST00000527624 DNAJC9-AS1A6NH13 148 aa13.04□□□□□ -0.32
PCDHA6-202ENST00000527624 MRPL51Q4U2R6 128 aaKnown RBP13.04□□□□□ -0.32
PCDHA6-202ENST00000527624 PRELID3AQ96N28 172 aa13.04□□□□□ -0.32
PCDHA6-202ENST00000527624 ST20Q9HBF5 79 aa13.04□□□□□ -0.32
PCDHA6-202ENST00000527624 PPP1R14DQ9NXH3 145 aa13.04□□□□□ -0.32
PCDHA6-202ENST00000527624 STPG4Q8N801 248 aa13.03□□□□□ -0.32
PCDHA6-202ENST00000527624 OR8A1Q8NGG7 326 aa13.03□□□□□ -0.32
PCDHA6-202ENST00000527624 OR10AG1Q8NH19 301 aa13.03□□□□□ -0.32
PCDHA6-202ENST00000527624 DCANP1Q8TF63 244 aa13.03□□□□□ -0.32
PCDHA6-202ENST00000527624 LINC00477Q96M19 166 aa13.03□□□□□ -0.32
PCDHA6-202ENST00000527624 ZNF747Q9BV97 191 aa13.03□□□□□ -0.32
PCDHA6-202ENST00000527624 YAE1D1Q9NRH1 226 aa13.03□□□□□ -0.32
PCDHA6-202ENST00000527624 SIGLEC8Q9NYZ4 499 aa13.03□□□□□ -0.32
PCDHA6-202ENST00000527624 MSRB1Q9NZV6 116 aa13.03□□□□□ -0.32
PCDHA6-202ENST00000527624 HECTD1Q9ULT8 2610 aa13.03□□□□□ -0.32
PCDHA6-202ENST00000527624 TEX29Q8N6K0 151 aa13.03□□□□□ -0.32
PCDHA6-202ENST00000527624 FOXC2Q99958 501 aa13.03□□□□□ -0.32
PCDHA6-202ENST00000527624 TMEM208Q9BTX3 173 aa13.03□□□□□ -0.32
PCDHA6-202ENST00000527624 TIMM8BQ9Y5J9 83 aaPredicted RBP13.03□□□□□ -0.32
PCDHA6-202ENST00000527624 hDV102S1A0JD36 115 aa13.02□□□□□ -0.33
PCDHA6-202ENST00000527624 KHDC1LQ5JSQ8 128 aa13.02□□□□□ -0.33
PCDHA6-202ENST00000527624 ZFAND2AQ8N6M9 145 aa13.02□□□□□ -0.33
PCDHA6-202ENST00000527624 MCRIP2Q9BUT9 160 aaKnown RBP13.02□□□□□ -0.33
PCDHA6-202ENST00000527624 CNFNQ9BYD5 112 aa13.02□□□□□ -0.33
PCDHA6-202ENST00000527624 MS4A6AQ9H2W1 248 aa13.02□□□□□ -0.33
PCDHA6-202ENST00000527624 LOC389332A0A1B0GUA5 103 aa13.01□□□□□ -0.33
PCDHA6-202ENST00000527624 LINC01545Q5VT33 79 aa13.01□□□□□ -0.33
PCDHA6-202ENST00000527624 A0A096LNJ9 63 aa13.01□□□□□ -0.33
PCDHA6-202ENST00000527624 H0Y8G0 127 aa13.01□□□□□ -0.33
PCDHA6-202ENST00000527624 TCTEX1D4Q5JR98 221 aa13.01□□□□□ -0.33
PCDHA6-202ENST00000527624 TMEM86BQ8N661 226 aa13.01□□□□□ -0.33
PCDHA6-202ENST00000527624 ESM1Q9NQ30 184 aa13.01□□□□□ -0.33
PCDHA6-202ENST00000527624 LENEPQ9Y5L5 61 aa13.01□□□□□ -0.33
PCDHA6-202ENST00000527624 ID1P41134 155 aa13□□□□□ -0.33
PCDHA6-202ENST00000527624 SLURP1P55000 103 aa13□□□□□ -0.33
PCDHA6-202ENST00000527624 KIR3DS1Q14943 382 aa13□□□□□ -0.33
PCDHA6-202ENST00000527624 Q6ZSV7 163 aa13□□□□□ -0.33
PCDHA6-202ENST00000527624 DUX3Q96PT4 197 aa13□□□□□ -0.33
PCDHA6-202ENST00000527624 DLEU1O43261 78 aa13□□□□□ -0.33
PCDHA6-202ENST00000527624 CD5LO43866 347 aa13□□□□□ -0.33
PCDHA6-202ENST00000527624 CKS2P33552 79 aa13□□□□□ -0.33
PCDHA6-202ENST00000527624 MTORP42345 2549 aa12.99□□□□□ -0.33
PCDHA6-202ENST00000527624 HSBP1L1C9JCN9 74 aa12.99□□□□□ -0.33
PCDHA6-202ENST00000527624 LGALS9O00182 355 aa12.99□□□□□ -0.33
PCDHA6-202ENST00000527624 ZNF688P0C7X2 276 aa12.99□□□□□ -0.33
PCDHA6-202ENST00000527624 GAGE1Q13065 139 aa12.99□□□□□ -0.33
PCDHA6-202ENST00000527624 CUBNO60494 3623 aa12.99□□□□□ -0.33
PCDHA6-202ENST00000527624 RNASE4P34096 147 aaKnown RBP12.98□□□□□ -0.33
PCDHA6-202ENST00000527624 HINT1P49773 126 aaPredicted RBP12.98□□□□□ -0.33
PCDHA6-202ENST00000527624 NPYP01303 97 aa12.98□□□□□ -0.33
PCDHA6-202ENST00000527624 PSMG4Q5JS54 123 aa12.98□□□□□ -0.33
PCDHA6-202ENST00000527624 WFDC12Q8WWY7 111 aa12.98□□□□□ -0.33
PCDHA6-202ENST00000527624 NF1P21359 2839 aa12.98□□□□□ -0.33
PCDHA6-202ENST00000527624 AKAP9Q99996 3911 aa12.97□□□□□ -0.33
PCDHA6-202ENST00000527624 SMKR1H3BMG3 65 aa12.97□□□□□ -0.33
PCDHA6-202ENST00000527624 RNF185Q96GF1 192 aa12.97□□□□□ -0.33
PCDHA6-202ENST00000527624 FAM19A4Q96LR4 140 aa12.97□□□□□ -0.33
PCDHA6-202ENST00000527624 PMCHL2Q9BQD1 86 aa12.97□□□□□ -0.33
PCDHA6-202ENST00000527624 OR11H1Q8NG94 326 aa12.97□□□□□ -0.33
PCDHA6-202ENST00000527624 TP73-AS1Q9UF72 201 aa12.97□□□□□ -0.33
PCDHA6-202ENST00000527624 NCR2O95944 276 aa12.96□□□□□ -0.33
PCDHA6-202ENST00000527624 SAMD13Q5VXD3 122 aa12.96□□□□□ -0.33
PCDHA6-202ENST00000527624 ADAMTSL5Q6ZMM2 481 aa12.96□□□□□ -0.33
PCDHA6-202ENST00000527624 SCRT2Q9NQ03 307 aa12.96□□□□□ -0.33
PCDHA6-202ENST00000527624 TRAV21A0A0B4J279 112 aa12.96□□□□□ -0.34
PCDHA6-202ENST00000527624 H3BVH4 76 aa12.96□□□□□ -0.34
PCDHA6-202ENST00000527624 SLC25A34Q6PIV7 304 aa12.96□□□□□ -0.34
PCDHA6-202ENST00000527624 LINC01619G3V211 115 aa12.95□□□□□ -0.34
PCDHA6-202ENST00000527624 PPBPP02775 128 aa12.95□□□□□ -0.34
PCDHA6-202ENST00000527624 C11orf44Q8N8P7 122 aa12.95□□□□□ -0.34
PCDHA6-202ENST00000527624 KLHL30-AS1Q8NEE0 82 aa12.95□□□□□ -0.34
PCDHA6-202ENST00000527624 C4orf3Q8WVX3 66 aa12.95□□□□□ -0.34
PCDHA6-202ENST00000527624 NOTCH2Q04721 2471 aa12.95□□□□□ -0.34
PCDHA6-202ENST00000527624 K7EQG2 157 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms