RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 FBXL19-AS1Q494R0 122 aa9.67□□□□□ -0.86
CAPN1-208ENST00000527323 NEGR1Q7Z3B1 354 aa9.67□□□□□ -0.86
CAPN1-208ENST00000527323 COX8CQ7Z4L0 72 aa9.67□□□□□ -0.86
CAPN1-208ENST00000527323 DTX2Q86UW9 622 aa9.67□□□□□ -0.86
CAPN1-208ENST00000527323 TTC9CQ8N5M4 171 aa9.67□□□□□ -0.86
CAPN1-208ENST00000527323 HHLA3Q9XRX5 114 aa9.67□□□□□ -0.86
CAPN1-208ENST00000527323 UFC1Q9Y3C8 167 aa9.67□□□□□ -0.86
CAPN1-208ENST00000527323 TMEM238C9JI98 176 aa9.67□□□□□ -0.86
CAPN1-208ENST00000527323 IGHG4P01861 327 aa9.67□□□□□ -0.86
CAPN1-208ENST00000527323 MYOZ3Q8TDC0 251 aa9.67□□□□□ -0.86
CAPN1-208ENST00000527323 TRBV25-1A0A075B6N4 114 aa9.67□□□□□ -0.86
CAPN1-208ENST00000527323 TRAV40A0A0B4J280 105 aa9.67□□□□□ -0.86
CAPN1-208ENST00000527323 SMIM17P0DL12 118 aa9.67□□□□□ -0.86
CAPN1-208ENST00000527323 IL17RELQ6ZVW7 336 aa9.67□□□□□ -0.86
CAPN1-208ENST00000527323 OR11H6Q8NGC7 330 aa9.67□□□□□ -0.86
CAPN1-208ENST00000527323 ATP5LO75964 103 aa9.66□□□□□ -0.86
CAPN1-208ENST00000527323 PSMG4Q5JS54 123 aa9.66□□□□□ -0.86
CAPN1-208ENST00000527323 TIMD4Q96H15 378 aa9.66□□□□□ -0.86
CAPN1-208ENST00000527323 ZNF48Q96MX3 618 aaPredicted RBP9.66□□□□□ -0.86
CAPN1-208ENST00000527323 IGHV3OR16-10A0A075B7F0 116 aa9.66□□□□□ -0.86
CAPN1-208ENST00000527323 IGHV3-49A0A0A0MS15 119 aa9.66□□□□□ -0.86
CAPN1-208ENST00000527323 LY6G5BQ8NDX9 201 aa9.66□□□□□ -0.86
CAPN1-208ENST00000527323 ZNF575Q86XF7 245 aa9.65□□□□□ -0.86
CAPN1-208ENST00000527323 HIGD1BQ9P298 99 aa9.65□□□□□ -0.86
CAPN1-208ENST00000527323 TRAV26-2A0A0B4J265 109 aa9.65□□□□□ -0.86
CAPN1-208ENST00000527323 Q8N8P6 123 aa9.65□□□□□ -0.86
CAPN1-208ENST00000527323 MRPL35Q9NZE8 188 aaKnown RBP9.65□□□□□ -0.86
CAPN1-208ENST00000527323 CLEC3BP05452 202 aa9.64□□□□□ -0.87
CAPN1-208ENST00000527323 ECSCRQ19T08 205 aa9.64□□□□□ -0.87
CAPN1-208ENST00000527323 ZMAT4Q9H898 229 aa9.64□□□□□ -0.87
CAPN1-208ENST00000527323 SMPXQ9UHP9 88 aa9.64□□□□□ -0.87
CAPN1-208ENST00000527323 TRGV3P03979 118 aa9.64□□□□□ -0.87
CAPN1-208ENST00000527323 CCDC144NLQ6NUI1 221 aa9.64□□□□□ -0.87
CAPN1-208ENST00000527323 TEX48A0A1B0GUV7 120 aa9.64□□□□□ -0.87
CAPN1-208ENST00000527323 PRTN3P24158 256 aa9.64□□□□□ -0.87
CAPN1-208ENST00000527323 C15orf32Q32M92 178 aa9.64□□□□□ -0.87
CAPN1-208ENST00000527323 LINC01559Q495D7 138 aa9.64□□□□□ -0.87
CAPN1-208ENST00000527323 CEND1Q8N111 149 aa9.64□□□□□ -0.87
CAPN1-208ENST00000527323 PIFOQ8TCI5 191 aa9.64□□□□□ -0.87
CAPN1-208ENST00000527323 IGKV3D-20A0A0C4DH25 116 aa9.63□□□□□ -0.87
CAPN1-208ENST00000527323 ZNF207O43670 478 aaKnown RBP9.63□□□□□ -0.87
CAPN1-208ENST00000527323 SRSF2Q01130 221 aaKnown RBP9.63□□□□□ -0.87
CAPN1-208ENST00000527323 SPANXN1Q5VSR9 72 aa9.63□□□□□ -0.87
CAPN1-208ENST00000527323 VMO1Q7Z5L0 202 aa9.63□□□□□ -0.87
CAPN1-208ENST00000527323 CNFNQ9BYD5 112 aa9.63□□□□□ -0.87
CAPN1-208ENST00000527323 LAGE3Q14657 143 aa9.63□□□□□ -0.87
CAPN1-208ENST00000527323 TMEM78Q5T7P6 136 aa9.63□□□□□ -0.87
CAPN1-208ENST00000527323 BPESC1Q9GZL8 116 aa9.63□□□□□ -0.87
CAPN1-208ENST00000527323 AGPAT4-IT1Q9H0P7 198 aa9.63□□□□□ -0.87
CAPN1-208ENST00000527323 SETXQ7Z333 2677 aaKnown RBP9.62□□□□□ -0.87
CAPN1-208ENST00000527323 MAPKAPK5-AS1Q8N8E1 139 aa9.62□□□□□ -0.87
CAPN1-208ENST00000527323 HIST1H4GQ99525 98 aa9.62□□□□□ -0.87
CAPN1-208ENST00000527323 KLK15Q9H2R5 256 aa9.62□□□□□ -0.87
CAPN1-208ENST00000527323 IGHV7-81A0A0B4J1V7 117 aa9.62□□□□□ -0.87
CAPN1-208ENST00000527323 M0R1W7 72 aa9.62□□□□□ -0.87
CAPN1-208ENST00000527323 EFNA4P52798 201 aa9.62□□□□□ -0.87
CAPN1-208ENST00000527323 CLEC19AQ6UXS0 136 aa9.62□□□□□ -0.87
CAPN1-208ENST00000527323 C11orf21Q9P2W6 132 aa9.62□□□□□ -0.87
CAPN1-208ENST00000527323 BUB3O43684 328 aa9.61□□□□□ -0.87
CAPN1-208ENST00000527323 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.61□□□□□ -0.87
CAPN1-208ENST00000527323 LINC01546A6NGU7 62 aa9.61□□□□□ -0.87
CAPN1-208ENST00000527323 ODF3BA8MYP8 253 aa9.61□□□□□ -0.87
CAPN1-208ENST00000527323 ZNF479Q96JC4 524 aa9.61□□□□□ -0.87
CAPN1-208ENST00000527323 RAB9AP51151 201 aa9.6□□□□□ -0.87
CAPN1-208ENST00000527323 SAMD13Q5VXD3 122 aa9.6□□□□□ -0.87
CAPN1-208ENST00000527323 SLC50A1Q9BRV3 221 aa9.6□□□□□ -0.87
CAPN1-208ENST00000527323 TM2D2Q9BX73 214 aa9.6□□□□□ -0.87
CAPN1-208ENST00000527323 IGLL5B9A064 214 aa9.6□□□□□ -0.87
CAPN1-208ENST00000527323 ZFP36P26651 326 aaKnown RBP9.6□□□□□ -0.87
CAPN1-208ENST00000527323 WFDC2Q14508 124 aa9.6□□□□□ -0.87
CAPN1-208ENST00000527323 GTSF1LQ9H1H1 148 aa9.6□□□□□ -0.87
CAPN1-208ENST00000527323 TEP1Q99973 2627 aaKnown RBP9.6□□□□□ -0.87
CAPN1-208ENST00000527323 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.59□□□□□ -0.87
CAPN1-208ENST00000527323 C11orf71Q6IPW1 123 aa9.59□□□□□ -0.87
CAPN1-208ENST00000527323 Q6ZQT7 251 aa9.59□□□□□ -0.87
CAPN1-208ENST00000527323 PHLDA1Q8WV24 401 aaPredicted RBP9.59□□□□□ -0.87
CAPN1-208ENST00000527323 CHTOPQ9Y3Y2 248 aaKnown RBP9.59□□□□□ -0.87
CAPN1-208ENST00000527323 JMJD1CQ15652 2540 aa9.59□□□□□ -0.87
CAPN1-208ENST00000527323 IGLV2-18A0A075B6J9 118 aa9.59□□□□□ -0.87
CAPN1-208ENST00000527323 A0A087WX48 190 aa9.59□□□□□ -0.87
CAPN1-208ENST00000527323 IGHV4-39P01824 125 aa9.59□□□□□ -0.87
CAPN1-208ENST00000527323 C12orf74Q32Q52 190 aa9.59□□□□□ -0.87
CAPN1-208ENST00000527323 RBAKDNA6NC62 111 aa9.59□□□□□ -0.87
CAPN1-208ENST00000527323 H3BMG7 143 aa9.59□□□□□ -0.87
CAPN1-208ENST00000527323 H3BVH4 76 aa9.59□□□□□ -0.87
CAPN1-208ENST00000527323 AMTNQ6UX39 209 aa9.59□□□□□ -0.87
CAPN1-208ENST00000527323 ZNF502Q8TBZ5 544 aa9.59□□□□□ -0.87
CAPN1-208ENST00000527323 CCL19Q99731 98 aa9.59□□□□□ -0.87
CAPN1-208ENST00000527323 HIF1ANQ9NWT6 349 aa9.59□□□□□ -0.87
CAPN1-208ENST00000527323 ATP5J2P56134 94 aa9.58□□□□□ -0.88
CAPN1-208ENST00000527323 SCGB2A2Q13296 93 aa9.58□□□□□ -0.88
CAPN1-208ENST00000527323 Q5PR19 223 aa9.58□□□□□ -0.88
CAPN1-208ENST00000527323 FOXI2Q6ZQN5 318 aa9.58□□□□□ -0.88
CAPN1-208ENST00000527323 MTURNQ8N3F0 131 aa9.58□□□□□ -0.88
CAPN1-208ENST00000527323 Q8N9W7 124 aa9.58□□□□□ -0.88
CAPN1-208ENST00000527323 E9PLD3 99 aa9.58□□□□□ -0.88
CAPN1-208ENST00000527323 J3QR89 54 aa9.58□□□□□ -0.88
CAPN1-208ENST00000527323 SPRY2O43597 315 aa9.58□□□□□ -0.88
CAPN1-208ENST00000527323 SMAGPQ0VAQ4 97 aa9.58□□□□□ -0.88
CAPN1-208ENST00000527323 RNF152Q8N8N0 203 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 244.6 ms