RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 EDN2P20800 178 aa12.27□□□□□ -0.45
SNRNP35-204ENST00000527158 KHDC1LQ5JSQ8 128 aa12.27□□□□□ -0.45
SNRNP35-204ENST00000527158 OR10J6PQ8NGY7 276 aa12.27□□□□□ -0.45
SNRNP35-204ENST00000527158 C4orf3Q8WVX3 66 aa12.27□□□□□ -0.45
SNRNP35-204ENST00000527158 RNASE1P07998 156 aaKnown RBP12.26□□□□□ -0.45
SNRNP35-204ENST00000527158 ID1P41134 155 aa12.26□□□□□ -0.45
SNRNP35-204ENST00000527158 ZNF493Q6ZR52 646 aa12.26□□□□□ -0.45
SNRNP35-204ENST00000527158 SONP18583 2426 aaKnown RBP12.26□□□□□ -0.45
SNRNP35-204ENST00000527158 ZNF80P51504 273 aaPredicted RBP12.26□□□□□ -0.45
SNRNP35-204ENST00000527158 RPS20P60866 119 aaKnown RBP12.26□□□□□ -0.45
SNRNP35-204ENST00000527158 DPF1Q92782 380 aa12.26□□□□□ -0.45
SNRNP35-204ENST00000527158 LINC00477Q96M19 166 aa12.26□□□□□ -0.45
SNRNP35-204ENST00000527158 SMR3AQ99954 134 aa12.26□□□□□ -0.45
SNRNP35-204ENST00000527158 FASNP49327 2511 aaKnown RBP12.26□□□□□ -0.45
SNRNP35-204ENST00000527158 HECTD1Q9ULT8 2610 aa12.25□□□□□ -0.45
SNRNP35-204ENST00000527158 LINC01619G3V211 115 aa12.25□□□□□ -0.45
SNRNP35-204ENST00000527158 TFPI2P48307 235 aa12.25□□□□□ -0.45
SNRNP35-204ENST00000527158 MAJINQ3KP22 176 aa12.25□□□□□ -0.45
SNRNP35-204ENST00000527158 TCTEX1D4Q5JR98 221 aa12.25□□□□□ -0.45
SNRNP35-204ENST00000527158 SPATA12Q7Z6I5 190 aa12.25□□□□□ -0.45
SNRNP35-204ENST00000527158 SELENOKQ9Y6D0 94 aa12.25□□□□□ -0.45
SNRNP35-204ENST00000527158 M0QZ24 198 aa12.25□□□□□ -0.45
SNRNP35-204ENST00000527158 C18orf65Q6ZTR6 163 aa12.25□□□□□ -0.45
SNRNP35-204ENST00000527158 OR11H1Q8NG94 326 aa12.25□□□□□ -0.45
SNRNP35-204ENST00000527158 PMCHL2Q9BQD1 86 aa12.25□□□□□ -0.45
SNRNP35-204ENST00000527158 AP5S1Q9NUS5 200 aa12.25□□□□□ -0.45
SNRNP35-204ENST00000527158 LENEPQ9Y5L5 61 aa12.25□□□□□ -0.45
SNRNP35-204ENST00000527158 TMSB15BA0A087X1C1 80 aa12.24□□□□□ -0.45
SNRNP35-204ENST00000527158 SRSF2Q01130 221 aaKnown RBP12.24□□□□□ -0.45
SNRNP35-204ENST00000527158 DEFB136Q30KP8 78 aa12.24□□□□□ -0.45
SNRNP35-204ENST00000527158 SLC25A34Q6PIV7 304 aa12.24□□□□□ -0.45
SNRNP35-204ENST00000527158 COX11Q9Y6N1 276 aa12.24□□□□□ -0.45
SNRNP35-204ENST00000527158 ORM1P02763 201 aa12.23□□□□□ -0.45
SNRNP35-204ENST00000527158 HINT1P49773 126 aaPredicted RBP12.23□□□□□ -0.45
SNRNP35-204ENST00000527158 FA2HQ7L5A8 372 aa12.23□□□□□ -0.45
SNRNP35-204ENST00000527158 WFDC3Q8IUB2 231 aa12.23□□□□□ -0.45
SNRNP35-204ENST00000527158 KLHL30-AS1Q8NEE0 82 aa12.23□□□□□ -0.45
SNRNP35-204ENST00000527158 OR1N2Q8NGR9 330 aa12.23□□□□□ -0.45
SNRNP35-204ENST00000527158 OR10AG1Q8NH19 301 aa12.23□□□□□ -0.45
SNRNP35-204ENST00000527158 TPPP3Q9BW30 176 aa12.23□□□□□ -0.45
SNRNP35-204ENST00000527158 LY6G6DO95868 133 aa12.23□□□□□ -0.45
SNRNP35-204ENST00000527158 ARMS2P0C7Q2 107 aa12.23□□□□□ -0.45
SNRNP35-204ENST00000527158 SLURP1P55000 103 aa12.23□□□□□ -0.45
SNRNP35-204ENST00000527158 HILS1P60008 231 aa12.23□□□□□ -0.45
SNRNP35-204ENST00000527158 DCANP1Q8TF63 244 aa12.23□□□□□ -0.45
SNRNP35-204ENST00000527158 WFDC12Q8WWY7 111 aa12.23□□□□□ -0.45
SNRNP35-204ENST00000527158 ACANP16112 2415 aa12.22□□□□□ -0.45
SNRNP35-204ENST00000527158 HIST1H1AQ02539 215 aaPredicted RBP12.22□□□□□ -0.45
SNRNP35-204ENST00000527158 LINC01545Q5VT33 79 aa12.22□□□□□ -0.45
SNRNP35-204ENST00000527158 C12orf54Q6X4T0 127 aa12.22□□□□□ -0.45
SNRNP35-204ENST00000527158 OR8A1Q8NGG7 326 aa12.22□□□□□ -0.45
SNRNP35-204ENST00000527158 PRSS3P2Q8NHM4 247 aa12.22□□□□□ -0.45
SNRNP35-204ENST00000527158 C16orf95Q9H693 158 aa12.22□□□□□ -0.45
SNRNP35-204ENST00000527158 PEMTQ9UBM1 199 aa12.22□□□□□ -0.45
SNRNP35-204ENST00000527158 JMJD8Q96S16 334 aa12.21□□□□□ -0.45
SNRNP35-204ENST00000527158 CBY1Q9Y3M2 126 aa12.21□□□□□ -0.45
SNRNP35-204ENST00000527158 U3KQK5 164 aa12.21□□□□□ -0.45
SNRNP35-204ENST00000527158 SNRPD3P62318 126 aaKnown RBP12.2□□□□□ -0.46
SNRNP35-204ENST00000527158 AKAP9Q99996 3911 aa12.2□□□□□ -0.46
SNRNP35-204ENST00000527158 LINC01559Q495D7 138 aa12.2□□□□□ -0.46
SNRNP35-204ENST00000527158 LYZL1Q6UWQ5 148 aa12.2□□□□□ -0.46
SNRNP35-204ENST00000527158 LINC01006Q8NI28 216 aa12.2□□□□□ -0.46
SNRNP35-204ENST00000527158 SCRT2Q9NQ03 307 aa12.2□□□□□ -0.46
SNRNP35-204ENST00000527158 PTTG1IPP53801 180 aa12.19□□□□□ -0.46
SNRNP35-204ENST00000527158 UBE2V1Q13404 147 aa12.19□□□□□ -0.46
SNRNP35-204ENST00000527158 ZNF747Q9BV97 191 aa12.19□□□□□ -0.46
SNRNP35-204ENST00000527158 F6UB75 175 aa12.19□□□□□ -0.46
SNRNP35-204ENST00000527158 LINC00173Q6ZV60 143 aa12.19□□□□□ -0.46
SNRNP35-204ENST00000527158 FER1L6-AS1Q8NA97 138 aa12.19□□□□□ -0.46
SNRNP35-204ENST00000527158 OR9G4Q8NGQ1 327 aa12.19□□□□□ -0.46
SNRNP35-204ENST00000527158 DUX3Q96PT4 197 aa12.19□□□□□ -0.46
SNRNP35-204ENST00000527158 K7EQG2 157 aa12.18□□□□□ -0.46
SNRNP35-204ENST00000527158 DEFB1P60022 68 aa12.18□□□□□ -0.46
SNRNP35-204ENST00000527158 FAM104BQ5XKR9 115 aa12.18□□□□□ -0.46
SNRNP35-204ENST00000527158 ORMDL3Q8N138 153 aa12.18□□□□□ -0.46
SNRNP35-204ENST00000527158 MYO9AB2RTY4 2548 aa12.18□□□□□ -0.46
SNRNP35-204ENST00000527158 TRBV7-9A0A0J9YWB2 115 aa12.18□□□□□ -0.46
SNRNP35-204ENST00000527158 TCF21O43680 179 aa12.18□□□□□ -0.46
SNRNP35-204ENST00000527158 hDV102S1A0JD36 115 aa12.17□□□□□ -0.46
SNRNP35-204ENST00000527158 CSN3P07498 182 aa12.17□□□□□ -0.46
SNRNP35-204ENST00000527158 ZNF688P0C7X2 276 aa12.17□□□□□ -0.46
SNRNP35-204ENST00000527158 CD28P10747 220 aa12.17□□□□□ -0.46
SNRNP35-204ENST00000527158 PSMG4Q5JS54 123 aa12.17□□□□□ -0.46
SNRNP35-204ENST00000527158 C11orf44Q8N8P7 122 aa12.17□□□□□ -0.46
SNRNP35-204ENST00000527158 IGLC6P0CF74 106 aa12.16□□□□□ -0.46
SNRNP35-204ENST00000527158 ADAMTSL5Q6ZMM2 481 aa12.16□□□□□ -0.46
SNRNP35-204ENST00000527158 ZFAND2AQ8N6M9 145 aa12.16□□□□□ -0.46
SNRNP35-204ENST00000527158 DLX4Q92988 240 aaPredicted RBP12.16□□□□□ -0.46
SNRNP35-204ENST00000527158 FAM19A4Q96LR4 140 aa12.16□□□□□ -0.46
SNRNP35-204ENST00000527158 PRELID3AQ96N28 172 aa12.16□□□□□ -0.46
SNRNP35-204ENST00000527158 TSSC4Q9Y5U2 329 aaPredicted RBP12.16□□□□□ -0.46
SNRNP35-204ENST00000527158 TRAV21A0A0B4J279 112 aa12.15□□□□□ -0.46
SNRNP35-204ENST00000527158 IGKV3D-20A0A0C4DH25 116 aa12.15□□□□□ -0.46
SNRNP35-204ENST00000527158 A0A1W2PRX2 142 aa12.15□□□□□ -0.46
SNRNP35-204ENST00000527158 J3KRW8 73 aa12.15□□□□□ -0.46
SNRNP35-204ENST00000527158 COX8AP10176 69 aa12.15□□□□□ -0.46
SNRNP35-204ENST00000527158 HIST2H2BDQ6DRA6 164 aa12.15□□□□□ -0.46
SNRNP35-204ENST00000527158 ZNF575Q86XF7 245 aa12.15□□□□□ -0.46
SNRNP35-204ENST00000527158 NDUFA7O95182 113 aa12.15□□□□□ -0.47
SNRNP35-204ENST00000527158 LGALS9BQ3B8N2 356 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms