RNA–Protein interactions for RNA: ENST00000526821.5

ATPAF1-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, human

TSL 3

Gene ATPAF1, Length 1,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATPAF1-208	ENST00000526821	SMIM27	A0A1W2PRY6	76 aa		4.56	□□□□□ -1.68
ATPAF1-208	ENST00000526821	LINC00587	B1AMM8	73 aa		4.56	□□□□□ -1.68
ATPAF1-208	ENST00000526821	TYMS	P04818	313 aa		4.56	□□□□□ -1.68
ATPAF1-208	ENST00000526821	RAB5A	P20339	215 aa		4.56	□□□□□ -1.68
ATPAF1-208	ENST00000526821	ID1	P41134	155 aa		4.56	□□□□□ -1.68
ATPAF1-208	ENST00000526821	ZNF138	P52744	262 aa		4.56	□□□□□ -1.68
ATPAF1-208	ENST00000526821	ERCC8	Q13216	396 aa		4.56	□□□□□ -1.68
ATPAF1-208	ENST00000526821	ZNF738	Q8NE65	137 aa		4.56	□□□□□ -1.68
ATPAF1-208	ENST00000526821	OR8A1	Q8NGG7	326 aa		4.56	□□□□□ -1.68
ATPAF1-208	ENST00000526821		Q8TAT8	98 aa		4.56	□□□□□ -1.68
ATPAF1-208	ENST00000526821	FAM19A4	Q96LR4	140 aa		4.56	□□□□□ -1.68
ATPAF1-208	ENST00000526821	LINC00477	Q96M19	166 aa		4.56	□□□□□ -1.68
ATPAF1-208	ENST00000526821	ASCL2	Q99929	193 aa		4.56	□□□□□ -1.68
ATPAF1-208	ENST00000526821	CITED1	Q99966	193 aa		4.56	□□□□□ -1.68
ATPAF1-208	ENST00000526821	GPR61	Q9BZJ8	451 aa		4.56	□□□□□ -1.68
ATPAF1-208	ENST00000526821	LENEP	Q9Y5L5	61 aa		4.56	□□□□□ -1.68
ATPAF1-208	ENST00000526821	SELENOK	Q9Y6D0	94 aa		4.56	□□□□□ -1.68
ATPAF1-208	ENST00000526821	URGCP-MRPS24	S4R325	110 aa		4.56	□□□□□ -1.68
ATPAF1-208	ENST00000526821	IGKV3-7	A0A075B6H7	116 aa		4.55	□□□□□ -1.68
ATPAF1-208	ENST00000526821	TRAV25	A0A0B4J276	109 aa		4.55	□□□□□ -1.68
ATPAF1-208	ENST00000526821	FAM231B	A6NCW3	169 aa		4.55	□□□□□ -1.68
ATPAF1-208	ENST00000526821	ZNF705G	A8MUZ8	300 aa	Predicted RBP	4.55	□□□□□ -1.68
ATPAF1-208	ENST00000526821	UBE2C	O00762	179 aa		4.55	□□□□□ -1.68
ATPAF1-208	ENST00000526821	CT45A10	P0DMU9	189 aa		4.55	□□□□□ -1.68
ATPAF1-208	ENST00000526821	S100P	P25815	95 aa		4.55	□□□□□ -1.68
ATPAF1-208	ENST00000526821	ZNF80	P51504	273 aa	Predicted RBP	4.55	□□□□□ -1.68
ATPAF1-208	ENST00000526821	FOXA3	P55318	350 aa	Predicted RBP	4.55	□□□□□ -1.68
ATPAF1-208	ENST00000526821	FAM3B	P58499	235 aa	Predicted RBP	4.55	□□□□□ -1.68
ATPAF1-208	ENST00000526821	DEFB1	P60022	68 aa		4.55	□□□□□ -1.68
ATPAF1-208	ENST00000526821	NSUN5P1	Q3KNT7	163 aa		4.55	□□□□□ -1.68
ATPAF1-208	ENST00000526821	PRR27	Q6MZM9	219 aa		4.55	□□□□□ -1.68
ATPAF1-208	ENST00000526821	KCNIP4	Q6PIL6	250 aa		4.55	□□□□□ -1.68
ATPAF1-208	ENST00000526821	APRG1	Q8IVJ8	170 aa		4.55	□□□□□ -1.68
ATPAF1-208	ENST00000526821	TMEM61	Q8N0U2	210 aa		4.55	□□□□□ -1.68
ATPAF1-208	ENST00000526821	GBGT1	Q8N5D6	347 aa		4.55	□□□□□ -1.68
ATPAF1-208	ENST00000526821	OR4B1	Q8NGF8	309 aa		4.55	□□□□□ -1.68
ATPAF1-208	ENST00000526821	TSKU	Q8WUA8	353 aa		4.55	□□□□□ -1.68
ATPAF1-208	ENST00000526821	FAM210B	Q96KR6	192 aa		4.55	□□□□□ -1.68
ATPAF1-208	ENST00000526821	RPP21	Q9H633	154 aa	Known RBP	4.55	□□□□□ -1.68
ATPAF1-208	ENST00000526821	GSN-AS1	Q9NRJ2	163 aa		4.55	□□□□□ -1.68
ATPAF1-208	ENST00000526821	ZNF256	Q9Y2P7	627 aa	Predicted RBP	4.55	□□□□□ -1.68
ATPAF1-208	ENST00000526821		A0A0J9YX75	114 aa		4.54	□□□□□ -1.68
ATPAF1-208	ENST00000526821		A0A1W2PPQ1	181 aa		4.54	□□□□□ -1.68
ATPAF1-208	ENST00000526821		A8MTW9	85 aa		4.54	□□□□□ -1.68
ATPAF1-208	ENST00000526821		F6UB75	175 aa		4.54	□□□□□ -1.68
ATPAF1-208	ENST00000526821	PHOX2A	O14813	284 aa		4.54	□□□□□ -1.68
ATPAF1-208	ENST00000526821	SH2D1A	O60880	128 aa		4.54	□□□□□ -1.68
ATPAF1-208	ENST00000526821	CA1	P00915	261 aa	Predicted RBP	4.54	□□□□□ -1.68
ATPAF1-208	ENST00000526821		P01737	135 aa		4.54	□□□□□ -1.68
ATPAF1-208	ENST00000526821	ZNF705D	P0CH99	300 aa	Predicted RBP	4.54	□□□□□ -1.68
ATPAF1-208	ENST00000526821	ZNF705B	P0CI00	300 aa	Predicted RBP	4.54	□□□□□ -1.68
ATPAF1-208	ENST00000526821	CRISP2	P16562	243 aa		4.54	□□□□□ -1.68
ATPAF1-208	ENST00000526821	AKR1D1	P51857	326 aa		4.54	□□□□□ -1.68
ATPAF1-208	ENST00000526821	SNRPD3	P62318	126 aa	Known RBP	4.54	□□□□□ -1.68
ATPAF1-208	ENST00000526821	PAFAH1B2	P68402	229 aa		4.54	□□□□□ -1.68
ATPAF1-208	ENST00000526821	FAM162B	Q5T6X4	162 aa		4.54	□□□□□ -1.68
ATPAF1-208	ENST00000526821	TMEM78	Q5T7P6	136 aa		4.54	□□□□□ -1.68
ATPAF1-208	ENST00000526821	RBPMS2	Q6ZRY4	209 aa	Known RBP	4.54	□□□□□ -1.68
ATPAF1-208	ENST00000526821	ZFAND2A	Q8N6M9	145 aa		4.54	□□□□□ -1.68
ATPAF1-208	ENST00000526821	OR10J6P	Q8NGY7	276 aa		4.54	□□□□□ -1.68
ATPAF1-208	ENST00000526821	BTF3L4	Q96K17	158 aa		4.54	□□□□□ -1.68
ATPAF1-208	ENST00000526821	ODF3	Q96PU9	254 aa		4.54	□□□□□ -1.68
ATPAF1-208	ENST00000526821	SPAG8	Q99932	426 aa	Predicted RBP	4.54	□□□□□ -1.68
ATPAF1-208	ENST00000526821	NDFIP1	Q9BT67	221 aa		4.54	□□□□□ -1.68
ATPAF1-208	ENST00000526821	GFRA4	Q9GZZ7	299 aa		4.54	□□□□□ -1.68
ATPAF1-208	ENST00000526821	SRD5A3	Q9H8P0	318 aa		4.54	□□□□□ -1.68
ATPAF1-208	ENST00000526821	VWF	P04275	2813 aa		4.53	□□□□□ -1.68
ATPAF1-208	ENST00000526821	IZUMO1R	A6ND01	250 aa		4.53	□□□□□ -1.68
ATPAF1-208	ENST00000526821	OR4C46	A6NHA9	309 aa		4.53	□□□□□ -1.68
ATPAF1-208	ENST00000526821	FABP5P3	A8MUU1	101 aa		4.53	□□□□□ -1.68
ATPAF1-208	ENST00000526821		A8MWL6	223 aa		4.53	□□□□□ -1.68
ATPAF1-208	ENST00000526821	KLLN	B2CW77	178 aa		4.53	□□□□□ -1.68
ATPAF1-208	ENST00000526821	IGLV1-51	P01701	117 aa		4.53	□□□□□ -1.68
ATPAF1-208	ENST00000526821	ZNF688	P0C7X2	276 aa		4.53	□□□□□ -1.68
ATPAF1-208	ENST00000526821	TFPI2	P48307	235 aa		4.53	□□□□□ -1.68
ATPAF1-208	ENST00000526821	HIST1H1A	Q02539	215 aa	Predicted RBP	4.53	□□□□□ -1.68
ATPAF1-208	ENST00000526821	KRTAP24-1	Q3LI83	254 aa		4.53	□□□□□ -1.68
ATPAF1-208	ENST00000526821	PSMG4	Q5JS54	123 aa		4.53	□□□□□ -1.68
ATPAF1-208	ENST00000526821	PRR9	Q5T870	116 aa		4.53	□□□□□ -1.68
ATPAF1-208	ENST00000526821	GDF5OS	Q5U4N7	250 aa		4.53	□□□□□ -1.68
ATPAF1-208	ENST00000526821	AMTN	Q6UX39	209 aa		4.53	□□□□□ -1.68
ATPAF1-208	ENST00000526821	FOXI2	Q6ZQN5	318 aa		4.53	□□□□□ -1.68
ATPAF1-208	ENST00000526821	NUP35	Q8NFH5	326 aa		4.53	□□□□□ -1.68
ATPAF1-208	ENST00000526821	OR2D3	Q8NGH3	330 aa		4.53	□□□□□ -1.68
ATPAF1-208	ENST00000526821	OR2K2	Q8NGT1	345 aa		4.53	□□□□□ -1.68
ATPAF1-208	ENST00000526821	DYNLRB2	Q8TF09	96 aa		4.53	□□□□□ -1.68
ATPAF1-208	ENST00000526821	GTSF1	Q8WW33	167 aa		4.53	□□□□□ -1.68
ATPAF1-208	ENST00000526821	ZNF479	Q96JC4	524 aa		4.53	□□□□□ -1.68
ATPAF1-208	ENST00000526821	NAT8B	Q9UHF3	227 aa		4.53	□□□□□ -1.68
ATPAF1-208	ENST00000526821	TRRAP	Q9Y4A5	3859 aa		4.52	□□□□□ -1.69
ATPAF1-208	ENST00000526821		A0A1B0GXF2	115 aa		4.52	□□□□□ -1.69
ATPAF1-208	ENST00000526821	C5orf52	A6NGY3	159 aa		4.52	□□□□□ -1.69
ATPAF1-208	ENST00000526821	HIGD1C	A8MV81	97 aa		4.52	□□□□□ -1.69
ATPAF1-208	ENST00000526821	DUSP14	O95147	198 aa	Known RBP	4.52	□□□□□ -1.69
ATPAF1-208	ENST00000526821	FRMD6-AS1	P0C7T7	363 aa		4.52	□□□□□ -1.69
ATPAF1-208	ENST00000526821	RPS10	P46783	165 aa	Known RBP	4.52	□□□□□ -1.69
ATPAF1-208	ENST00000526821	PCP4	P48539	62 aa		4.52	□□□□□ -1.69
ATPAF1-208	ENST00000526821	TCL1A	P56279	114 aa		4.52	□□□□□ -1.69
ATPAF1-208	ENST00000526821	RPL19	P84098	196 aa	Known RBP	4.52	□□□□□ -1.69
ATPAF1-208	ENST00000526821	ODF3L2	Q3SX64	289 aa		4.52	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms