RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 TECPR2O15040 1411 aa-0.39□□□□□ -2.47
CSDE1-210ENST00000525878 BCL9LQ86UU0 1499 aa-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 SPEF2Q9C093 1822 aa-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 REV3LO60673 3130 aa-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 A0A1W2PPB8 328 aa-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 HIGD1CA8MV81 97 aa-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 KIR3DP1A8MWS1 328 aa-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 MCRIP1C9JLW8 97 aa-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 CETN3O15182 167 aa-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 LYRM1O43325 122 aa-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 CST8O60676 142 aa-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 IFNA4P05014 189 aa-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 CSN2P05814 226 aa-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 TPM3P06753 285 aa-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 PYYP10082 97 aa-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 FABP4P15090 132 aa-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 RPL35P42766 123 aaKnown RBP-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 HBBP68871 147 aa-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 VMA21Q3ZAQ7 101 aa-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 CCSMST1Q4G0I0 132 aa-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 LIN52Q52LA3 116 aa-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 C1orf140Q5VVS0 124 aa-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 HACD4Q5VWC8 232 aa-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 LYPD5Q6UWN5 251 aa-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 IDO2Q6ZQW0 420 aa-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 C3orf62Q6ZUJ4 267 aa-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 GRPEL2Q8TAA5 225 aa-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 CLEC2BQ92478 149 aa-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 ISOC1Q96CN7 298 aa-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 DMAC1Q96GE9 116 aa-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 CARD19Q96LW7 228 aa-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 ZNF714Q96N38 554 aa-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 Q96NJ1 140 aa-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 CIB3Q96Q77 187 aaPredicted RBP-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 DSCR8Q96T75 97 aa-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 RTL8AQ9BWD3 113 aa-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 OR2J1Q9GZK6 312 aa-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 MAP1LC3BQ9GZQ8 125 aa-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 CYP4F30PQ9H0H9 118 aa-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 C19orf12Q9NSK7 152 aa-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 ARMC1Q9NVT9 282 aa-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 MRPL36Q9P0J6 103 aaKnown RBP-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 COMMD3Q9UBI1 195 aa-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 SLC22A13Q9Y226 551 aa-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 TPRKBQ9Y3C4 175 aa-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 SPG11Q96JI7 2443 aa-0.4□□□□□ -2.47
CSDE1-210ENST00000525878 HIVEP1P15822 2718 aa-0.41□□□□□ -2.47
CSDE1-210ENST00000525878 CUBNO60494 3623 aa-0.41□□□□□ -2.47
CSDE1-210ENST00000525878 A0A0G2JMM0 328 aa-0.41□□□□□ -2.48
CSDE1-210ENST00000525878 C3orf85A0A1B0GTC6 90 aa-0.41□□□□□ -2.48
CSDE1-210ENST00000525878 TMEM30CPA0ZSE6 113 aa-0.41□□□□□ -2.48
CSDE1-210ENST00000525878 TPST1O60507 370 aa-0.41□□□□□ -2.48
CSDE1-210ENST00000525878 BANF1O75531 89 aa-0.41□□□□□ -2.48
CSDE1-210ENST00000525878 RPP14O95059 124 aaKnown RBP-0.41□□□□□ -2.48
CSDE1-210ENST00000525878 SERPINA1P01009 418 aa-0.41□□□□□ -2.48
CSDE1-210ENST00000525878 IFNA14P01570 189 aa-0.41□□□□□ -2.48
CSDE1-210ENST00000525878 IGKCP01834 107 aa-0.41□□□□□ -2.48
CSDE1-210ENST00000525878 TRACP01848 142 aa-0.41□□□□□ -2.48
CSDE1-210ENST00000525878 CTXN2P0C2S0 81 aa-0.41□□□□□ -2.48
CSDE1-210ENST00000525878 IFITM1P13164 125 aa-0.41□□□□□ -2.48
CSDE1-210ENST00000525878 OGNP20774 298 aaKnown RBP-0.41□□□□□ -2.48
CSDE1-210ENST00000525878 ELOF1P60002 83 aaKnown RBP-0.41□□□□□ -2.48
CSDE1-210ENST00000525878 TPM4P67936 248 aa-0.41□□□□□ -2.48
CSDE1-210ENST00000525878 WFDC2Q14508 124 aa-0.41□□□□□ -2.48
CSDE1-210ENST00000525878 KRTAP20-2Q3LI61 65 aa-0.41□□□□□ -2.48
CSDE1-210ENST00000525878 Q5VSD8 79 aa-0.41□□□□□ -2.48
CSDE1-210ENST00000525878 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.41□□□□□ -2.48
CSDE1-210ENST00000525878 NUP35Q8NFH5 326 aa-0.41□□□□□ -2.48
CSDE1-210ENST00000525878 AP1S3Q96PC3 154 aa-0.41□□□□□ -2.48
CSDE1-210ENST00000525878 BPESC1Q9GZL8 116 aa-0.41□□□□□ -2.48
CSDE1-210ENST00000525878 SH3BGRL3Q9H299 93 aa-0.41□□□□□ -2.48
CSDE1-210ENST00000525878 NMNAT1Q9HAN9 279 aaPredicted RBP-0.41□□□□□ -2.48
CSDE1-210ENST00000525878 LRTM1Q9HBL6 345 aa-0.41□□□□□ -2.48
CSDE1-210ENST00000525878 OTORQ9NRC9 128 aa-0.41□□□□□ -2.48
CSDE1-210ENST00000525878 IL20Q9NYY1 176 aa-0.41□□□□□ -2.48
CSDE1-210ENST00000525878 PRNDQ9UKY0 176 aa-0.41□□□□□ -2.48
CSDE1-210ENST00000525878 MPC1Q9Y5U8 109 aa-0.41□□□□□ -2.48
CSDE1-210ENST00000525878 DNAH2Q9P225 4427 aa-0.41□□□□□ -2.48
CSDE1-210ENST00000525878 BTAF1O14981 1849 aa-0.41□□□□□ -2.48
CSDE1-210ENST00000525878 PSME4Q14997 1843 aa-0.41□□□□□ -2.48
CSDE1-210ENST00000525878 SYNMO15061 1565 aa-0.41□□□□□ -2.48
CSDE1-210ENST00000525878 PAPPAQ13219 1627 aa-0.42□□□□□ -2.48
CSDE1-210ENST00000525878 USP9YO00507 2555 aaPredicted RBP-0.42□□□□□ -2.48
CSDE1-210ENST00000525878 ANKRD36A6QL64 1941 aa-0.42□□□□□ -2.48
CSDE1-210ENST00000525878 TRAV12-2A0A075B6T6 113 aa-0.42□□□□□ -2.48
CSDE1-210ENST00000525878 TEX49A0A1B0GTD5 131 aa-0.42□□□□□ -2.48
CSDE1-210ENST00000525878 CXorf51AA0A1B0GTR3 108 aa-0.42□□□□□ -2.48
CSDE1-210ENST00000525878 ARL5CA6NH57 179 aa-0.42□□□□□ -2.48
CSDE1-210ENST00000525878 RIIAD1A6NNX1 92 aa-0.42□□□□□ -2.48
CSDE1-210ENST00000525878 CDC42EP2O14613 210 aa-0.42□□□□□ -2.48
CSDE1-210ENST00000525878 NIPSNAP2O75323 286 aa-0.42□□□□□ -2.48
CSDE1-210ENST00000525878 SAA1P0DJI8 122 aaPredicted RBP-0.42□□□□□ -2.48
CSDE1-210ENST00000525878 BCL2P10415 239 aa-0.42□□□□□ -2.48
CSDE1-210ENST00000525878 DNAJB13P59910 316 aa-0.42□□□□□ -2.48
CSDE1-210ENST00000525878 GNG5P63218 68 aa-0.42□□□□□ -2.48
CSDE1-210ENST00000525878 MRPS36P82909 103 aaKnown RBP-0.42□□□□□ -2.48
CSDE1-210ENST00000525878 RPL19P84098 196 aaKnown RBP-0.42□□□□□ -2.48
CSDE1-210ENST00000525878 ITGB3BPQ13352 177 aaPredicted RBP-0.42□□□□□ -2.48
CSDE1-210ENST00000525878 RGS21Q2M5E4 152 aa-0.42□□□□□ -2.48
CSDE1-210ENST00000525878 DEFB109BQ30KR1 87 aa-0.42□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 267 ms