RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 TCF24Q7RTU0 167 aa5.3□□□□□ -1.56
VPS11-201ENST00000524454 ZNF738Q8NE65 137 aa5.3□□□□□ -1.56
VPS11-201ENST00000524454 WFDC9Q8NEX5 89 aa5.3□□□□□ -1.56
VPS11-201ENST00000524454 OR11H1Q8NG94 326 aa5.3□□□□□ -1.56
VPS11-201ENST00000524454 OR8A1Q8NGG7 326 aa5.3□□□□□ -1.56
VPS11-201ENST00000524454 SGK494Q96LW2 274 aa5.3□□□□□ -1.56
VPS11-201ENST00000524454 AGPAT4-IT1Q9H0P7 198 aa5.3□□□□□ -1.56
VPS11-201ENST00000524454 LAMTOR2Q9Y2Q5 125 aa5.3□□□□□ -1.56
VPS11-201ENST00000524454 PRKDCP78527 4128 aaKnown RBP5.29□□□□□ -1.56
VPS11-201ENST00000524454 NOTCH3Q9UM47 2321 aa5.29□□□□□ -1.56
VPS11-201ENST00000524454 IGHV4-4A0A075B6R2 117 aa5.29□□□□□ -1.56
VPS11-201ENST00000524454 IGHV4OR15-8A0A075B7B6 117 aa5.29□□□□□ -1.56
VPS11-201ENST00000524454 A0A087WW49 117 aa5.29□□□□□ -1.56
VPS11-201ENST00000524454 LOC102724200A0A096LPH7 203 aaPredicted RBP5.29□□□□□ -1.56
VPS11-201ENST00000524454 TRAV21A0A0B4J279 112 aa5.29□□□□□ -1.56
VPS11-201ENST00000524454 C2orf70A6NJV1 201 aa5.29□□□□□ -1.56
VPS11-201ENST00000524454 A8MTW9 85 aa5.29□□□□□ -1.56
VPS11-201ENST00000524454 ZNF705FA8MVS1 300 aaPredicted RBP5.29□□□□□ -1.56
VPS11-201ENST00000524454 PRAC2D3DTV9 90 aa5.29□□□□□ -1.56
VPS11-201ENST00000524454 K7EQG2 157 aa5.29□□□□□ -1.56
VPS11-201ENST00000524454 ZNF207O43670 478 aaKnown RBP5.29□□□□□ -1.56
VPS11-201ENST00000524454 DUSP14O95147 198 aaKnown RBP5.29□□□□□ -1.56
VPS11-201ENST00000524454 PPBPP02775 128 aa5.29□□□□□ -1.56
VPS11-201ENST00000524454 PMCHP20382 165 aa5.29□□□□□ -1.56
VPS11-201ENST00000524454 SLURP1P55000 103 aa5.29□□□□□ -1.56
VPS11-201ENST00000524454 SLAQ13239 276 aa5.29□□□□□ -1.56
VPS11-201ENST00000524454 TM4SF20Q53R12 229 aa5.29□□□□□ -1.56
VPS11-201ENST00000524454 ANKRD39Q53RE8 183 aa5.29□□□□□ -1.56
VPS11-201ENST00000524454 RNF182Q8N6D2 247 aa5.29□□□□□ -1.56
VPS11-201ENST00000524454 MRAPQ8TCY5 172 aa5.29□□□□□ -1.56
VPS11-201ENST00000524454 C8orf49Q96NF6 230 aa5.29□□□□□ -1.56
VPS11-201ENST00000524454 CLUHP3Q96NS8 147 aa5.29□□□□□ -1.56
VPS11-201ENST00000524454 C12orf57Q99622 126 aa5.29□□□□□ -1.56
VPS11-201ENST00000524454 ALKBH7Q9BT30 221 aaPredicted RBP5.29□□□□□ -1.56
VPS11-201ENST00000524454 GPR61Q9BZJ8 451 aa5.29□□□□□ -1.56
VPS11-201ENST00000524454 NOTCH1P46531 2555 aa5.29□□□□□ -1.56
VPS11-201ENST00000524454 IGHV3-66A0A0C4DH42 116 aa5.28□□□□□ -1.56
VPS11-201ENST00000524454 KLLNB2CW77 178 aa5.28□□□□□ -1.56
VPS11-201ENST00000524454 K7EIL1 84 aa5.28□□□□□ -1.56
VPS11-201ENST00000524454 SNAI2O43623 268 aa5.28□□□□□ -1.56
VPS11-201ENST00000524454 AMBPP02760 352 aa5.28□□□□□ -1.56
VPS11-201ENST00000524454 HLA-DMBP28068 263 aa5.28□□□□□ -1.56
VPS11-201ENST00000524454 TSPOP30536 169 aa5.28□□□□□ -1.56
VPS11-201ENST00000524454 SRIP30626 198 aa5.28□□□□□ -1.56
VPS11-201ENST00000524454 LEPP41159 167 aa5.28□□□□□ -1.56
VPS11-201ENST00000524454 SYNJ2BPP57105 145 aa5.28□□□□□ -1.56
VPS11-201ENST00000524454 RAB4BP61018 213 aa5.28□□□□□ -1.56
VPS11-201ENST00000524454 CACNG7P62955 275 aa5.28□□□□□ -1.56
VPS11-201ENST00000524454 TDRG1Q3Y452 100 aa5.28□□□□□ -1.56
VPS11-201ENST00000524454 FOXI2Q6ZQN5 318 aa5.28□□□□□ -1.56
VPS11-201ENST00000524454 ZFAND2AQ8N6M9 145 aa5.28□□□□□ -1.56
VPS11-201ENST00000524454 FER1L6-AS1Q8NA97 138 aa5.28□□□□□ -1.56
VPS11-201ENST00000524454 OR9G4Q8NGQ1 327 aa5.28□□□□□ -1.56
VPS11-201ENST00000524454 OR1N2Q8NGR9 330 aa5.28□□□□□ -1.56
VPS11-201ENST00000524454 Q8TAT8 98 aa5.28□□□□□ -1.56
VPS11-201ENST00000524454 DPF1Q92782 380 aa5.28□□□□□ -1.56
VPS11-201ENST00000524454 CHCHD1Q96BP2 118 aaKnown RBP5.28□□□□□ -1.56
VPS11-201ENST00000524454 KCNS1Q96KK3 526 aa5.28□□□□□ -1.56
VPS11-201ENST00000524454 PGLYRP4Q96LB8 373 aa5.28□□□□□ -1.56
VPS11-201ENST00000524454 TMEM191AQ9H0A3 160 aa5.28□□□□□ -1.56
VPS11-201ENST00000524454 MS4A6AQ9H2W1 248 aa5.28□□□□□ -1.56
VPS11-201ENST00000524454 IGHV3OR16-13A0A075B7E8 117 aa5.27□□□□□ -1.57
VPS11-201ENST00000524454 IGHV3-49A0A0A0MS15 119 aa5.27□□□□□ -1.57
VPS11-201ENST00000524454 IGHV3-74A0A0B4J1X5 117 aa5.27□□□□□ -1.57
VPS11-201ENST00000524454 A0A0J9YX75 114 aa5.27□□□□□ -1.57
VPS11-201ENST00000524454 ARMS2P0C7Q2 107 aa5.27□□□□□ -1.57
VPS11-201ENST00000524454 FABP4P15090 132 aa5.27□□□□□ -1.57
VPS11-201ENST00000524454 ZNF80P51504 273 aaPredicted RBP5.27□□□□□ -1.57
VPS11-201ENST00000524454 RPL11P62913 178 aaKnown RBP5.27□□□□□ -1.57
VPS11-201ENST00000524454 JOSD1Q15040 202 aaPredicted RBP5.27□□□□□ -1.57
VPS11-201ENST00000524454 GDF5OSQ5U4N7 250 aa5.27□□□□□ -1.57
VPS11-201ENST00000524454 BAGE3Q86Y29 109 aa5.27□□□□□ -1.57
VPS11-201ENST00000524454 DEFB125Q8N687 156 aa5.27□□□□□ -1.57
VPS11-201ENST00000524454 OR2K2Q8NGT1 345 aa5.27□□□□□ -1.57
VPS11-201ENST00000524454 C18orf32Q8TCD1 76 aa5.27□□□□□ -1.57
VPS11-201ENST00000524454 DLX4Q92988 240 aaPredicted RBP5.27□□□□□ -1.57
VPS11-201ENST00000524454 C20orf173Q96LM9 149 aa5.27□□□□□ -1.57
VPS11-201ENST00000524454 SPAG8Q99932 426 aaPredicted RBP5.27□□□□□ -1.57
VPS11-201ENST00000524454 FAM110AQ9BQ89 295 aa5.27□□□□□ -1.57
VPS11-201ENST00000524454 U3KQK5 164 aa5.27□□□□□ -1.57
VPS11-201ENST00000524454 OR4C46A6NHA9 309 aa5.26□□□□□ -1.57
VPS11-201ENST00000524454 ZNF324O75467 553 aaPredicted RBP5.26□□□□□ -1.57
VPS11-201ENST00000524454 SERF1AO75920 110 aa5.26□□□□□ -1.57
VPS11-201ENST00000524454 NXPH4O95158 308 aa5.26□□□□□ -1.57
VPS11-201ENST00000524454 ORM1P02763 201 aa5.26□□□□□ -1.57
VPS11-201ENST00000524454 GPX1P07203 203 aa5.26□□□□□ -1.57
VPS11-201ENST00000524454 CAMPP49913 170 aa5.26□□□□□ -1.57
VPS11-201ENST00000524454 CMC4P56277 68 aaPredicted RBP5.26□□□□□ -1.57
VPS11-201ENST00000524454 ERCC8Q13216 396 aa5.26□□□□□ -1.57
VPS11-201ENST00000524454 IQCJQ1A5X6 159 aa5.26□□□□□ -1.57
VPS11-201ENST00000524454 DEFB121Q5J5C9 76 aa5.26□□□□□ -1.57
VPS11-201ENST00000524454 GFI1BQ5VTD9 330 aa5.26□□□□□ -1.57
VPS11-201ENST00000524454 FAM104BQ5XKR9 115 aa5.26□□□□□ -1.57
VPS11-201ENST00000524454 IGFL4Q6B9Z1 124 aa5.26□□□□□ -1.57
VPS11-201ENST00000524454 EBLN2Q6P2I7 272 aa5.26□□□□□ -1.57
VPS11-201ENST00000524454 LYZL1Q6UWQ5 148 aa5.26□□□□□ -1.57
VPS11-201ENST00000524454 ZNF575Q86XF7 245 aa5.26□□□□□ -1.57
VPS11-201ENST00000524454 OR10D4PQ8NGN7 298 aa5.26□□□□□ -1.57
VPS11-201ENST00000524454 TP53TG3Q9ULZ0 132 aa5.26□□□□□ -1.57
VPS11-201ENST00000524454 IGKV3D-20A0A0C4DH25 116 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms