RNA–Protein interactions for RNA: ENST00000523867.5

HDAC9-227, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best)

Gene HDAC9, Length 2,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-227ENST00000523867 TANC2Q9HCD6 1990 aa5.75□□□□□ -1.49
HDAC9-227ENST00000523867 MGAQ8IWI9 3026 aa5.75□□□□□ -1.49
HDAC9-227ENST00000523867 PGPA6NDG6 321 aa5.75□□□□□ -1.49
HDAC9-227ENST00000523867 WT1P19544 449 aaPredicted RBP5.75□□□□□ -1.49
HDAC9-227ENST00000523867 PSMB2P49721 201 aa5.75□□□□□ -1.49
HDAC9-227ENST00000523867 CCL8P80075 99 aa5.75□□□□□ -1.49
HDAC9-227ENST00000523867 TWIST1Q15672 202 aa5.75□□□□□ -1.49
HDAC9-227ENST00000523867 THAP8Q8NA92 274 aa5.75□□□□□ -1.49
HDAC9-227ENST00000523867 DKK2Q9UBU2 259 aa5.75□□□□□ -1.49
HDAC9-227ENST00000523867 CHD6Q8TD26 2715 aa5.75□□□□□ -1.49
HDAC9-227ENST00000523867 DUSP14O95147 198 aaKnown RBP5.74□□□□□ -1.49
HDAC9-227ENST00000523867 FSTL3O95633 263 aa5.74□□□□□ -1.49
HDAC9-227ENST00000523867 HES1Q14469 280 aa5.74□□□□□ -1.49
HDAC9-227ENST00000523867 DEFB109BQ30KR1 87 aa5.74□□□□□ -1.49
HDAC9-227ENST00000523867 TPSG1Q9NRR2 321 aa5.74□□□□□ -1.49
HDAC9-227ENST00000523867 MRPL36Q9P0J6 103 aaKnown RBP5.74□□□□□ -1.49
HDAC9-227ENST00000523867 TRBV6-1A0A0K0K1D8 114 aa5.74□□□□□ -1.49
HDAC9-227ENST00000523867 C9JAW5 83 aa5.74□□□□□ -1.49
HDAC9-227ENST00000523867 M0R2P5 195 aa5.74□□□□□ -1.49
HDAC9-227ENST00000523867 OVOL3O00110 214 aa5.74□□□□□ -1.49
HDAC9-227ENST00000523867 DPM2O94777 84 aa5.74□□□□□ -1.49
HDAC9-227ENST00000523867 NPYP01303 97 aa5.74□□□□□ -1.49
HDAC9-227ENST00000523867 LINC00694P0DN24 101 aa5.74□□□□□ -1.49
HDAC9-227ENST00000523867 ZCCHC24Q8N2G6 241 aaKnown RBP5.74□□□□□ -1.49
HDAC9-227ENST00000523867 ANKRD29Q8N6D5 301 aa5.74□□□□□ -1.49
HDAC9-227ENST00000523867 SLC25A39Q9BZJ4 359 aaPredicted RBP5.74□□□□□ -1.49
HDAC9-227ENST00000523867 HIGD1AQ9Y241 93 aa5.74□□□□□ -1.49
HDAC9-227ENST00000523867 TP53TG1Q9Y2A0 90 aa5.74□□□□□ -1.49
HDAC9-227ENST00000523867 FAM215AQ9Y5M1 114 aa5.74□□□□□ -1.49
HDAC9-227ENST00000523867 RAI1Q7Z5J4 1906 aaPredicted RBP5.74□□□□□ -1.49
HDAC9-227ENST00000523867 K7EMI3 77 aa5.73□□□□□ -1.49
HDAC9-227ENST00000523867 CRYGDP07320 174 aa5.73□□□□□ -1.49
HDAC9-227ENST00000523867 VMA21Q3ZAQ7 101 aa5.73□□□□□ -1.49
HDAC9-227ENST00000523867 BAHCC1Q9P281 2608 aa5.73□□□□□ -1.49
HDAC9-227ENST00000523867 IGLV2-23P01705 113 aa5.73□□□□□ -1.49
HDAC9-227ENST00000523867 LOXL1Q08397 574 aaPredicted RBP5.73□□□□□ -1.49
HDAC9-227ENST00000523867 HCP5Q6MZN7 132 aa5.73□□□□□ -1.49
HDAC9-227ENST00000523867 LINC00322Q6ZN03 302 aaPredicted RBP5.73□□□□□ -1.49
HDAC9-227ENST00000523867 C22orf34Q6ZV56 151 aa5.73□□□□□ -1.49
HDAC9-227ENST00000523867 ORMDL3Q8N138 153 aa5.73□□□□□ -1.49
HDAC9-227ENST00000523867 LINC00528Q8N1L1 170 aa5.73□□□□□ -1.49
HDAC9-227ENST00000523867 OR11H6Q8NGC7 330 aa5.73□□□□□ -1.49
HDAC9-227ENST00000523867 SPTBN2O15020 2390 aa5.72□□□□□ -1.49
HDAC9-227ENST00000523867 TRAV8-2A0A0B4J237 113 aa5.72□□□□□ -1.49
HDAC9-227ENST00000523867 CRLF1O75462 422 aa5.72□□□□□ -1.49
HDAC9-227ENST00000523867 UBE2D1P51668 147 aa5.72□□□□□ -1.49
HDAC9-227ENST00000523867 TMEM219Q86XT9 240 aa5.72□□□□□ -1.49
HDAC9-227ENST00000523867 ZNRF2Q8NHG8 242 aa5.72□□□□□ -1.49
HDAC9-227ENST00000523867 TRGV9Q99603 122 aa5.72□□□□□ -1.49
HDAC9-227ENST00000523867 PRADC1Q9BSG0 188 aa5.72□□□□□ -1.49
HDAC9-227ENST00000523867 C21orf62Q9NYP8 219 aa5.72□□□□□ -1.49
HDAC9-227ENST00000523867 DYSFO75923 2080 aa5.72□□□□□ -1.49
HDAC9-227ENST00000523867 PLCE1Q9P212 2302 aa5.72□□□□□ -1.49
HDAC9-227ENST00000523867 TPRP12270 2363 aaKnown RBP5.72□□□□□ -1.49
HDAC9-227ENST00000523867 FAM236DA0A1B0GTK5 79 aa5.72□□□□□ -1.49
HDAC9-227ENST00000523867 NCBP2LA6PVI3 153 aaKnown RBP5.72□□□□□ -1.49
HDAC9-227ENST00000523867 H3BTX0 84 aa5.72□□□□□ -1.49
HDAC9-227ENST00000523867 NPFFO15130 113 aa5.72□□□□□ -1.49
HDAC9-227ENST00000523867 FAM236CP0DP71 79 aa5.72□□□□□ -1.49
HDAC9-227ENST00000523867 TMEM101Q96IK0 257 aa5.72□□□□□ -1.49
HDAC9-227ENST00000523867 Q9H3A6 140 aa5.72□□□□□ -1.49
HDAC9-227ENST00000523867 PRORYQ9H606 182 aa5.72□□□□□ -1.49
HDAC9-227ENST00000523867 Q9UF83 564 aa5.72□□□□□ -1.49
HDAC9-227ENST00000523867 ARFGEF3Q5TH69 2177 aa5.71□□□□□ -1.49
HDAC9-227ENST00000523867 SMG1Q96Q15 3661 aaKnown RBP5.71□□□□□ -1.49
HDAC9-227ENST00000523867 NDUFB3O43676 98 aa5.71□□□□□ -1.5
HDAC9-227ENST00000523867 TCRAP04437 139 aa5.71□□□□□ -1.5
HDAC9-227ENST00000523867 APELAP0DMC3 54 aa5.71□□□□□ -1.5
HDAC9-227ENST00000523867 GP9P14770 177 aa5.71□□□□□ -1.5
HDAC9-227ENST00000523867 FCER1GP30273 86 aa5.71□□□□□ -1.5
HDAC9-227ENST00000523867 EMP1P54849 157 aa5.71□□□□□ -1.5
HDAC9-227ENST00000523867 FXYD7P58549 80 aa5.71□□□□□ -1.5
HDAC9-227ENST00000523867 ZC2HC1BQ5TFG8 222 aa5.71□□□□□ -1.5
HDAC9-227ENST00000523867 RUSC1-AS1Q66K80 236 aa5.71□□□□□ -1.5
HDAC9-227ENST00000523867 C9orf139Q6ZV77 190 aa5.71□□□□□ -1.5
HDAC9-227ENST00000523867 NUP37Q8NFH4 326 aa5.71□□□□□ -1.5
HDAC9-227ENST00000523867 MYOZ3Q8TDC0 251 aa5.71□□□□□ -1.5
HDAC9-227ENST00000523867 IMUPQ9GZP8 106 aa5.71□□□□□ -1.5
HDAC9-227ENST00000523867 NAV3Q8IVL0 2385 aa5.71□□□□□ -1.5
HDAC9-227ENST00000523867 IGHV3-21A0A0B4J1V1 117 aa5.71□□□□□ -1.5
HDAC9-227ENST00000523867 IGHV3-72A0A0B4J1Y9 119 aa5.71□□□□□ -1.5
HDAC9-227ENST00000523867 TRBV7-7A0A0K0K1E9 115 aa5.71□□□□□ -1.5
HDAC9-227ENST00000523867 LOC107984640A0A0U1RRK4 108 aa5.71□□□□□ -1.5
HDAC9-227ENST00000523867 ATP5G1P05496 136 aa5.71□□□□□ -1.5
HDAC9-227ENST00000523867 FAM104BQ5XKR9 115 aa5.71□□□□□ -1.5
HDAC9-227ENST00000523867 LINC00311Q8N616 119 aa5.71□□□□□ -1.5
HDAC9-227ENST00000523867 MAPKAPK5-AS1Q8N8E1 139 aa5.71□□□□□ -1.5
HDAC9-227ENST00000523867 CCL17Q92583 94 aa5.71□□□□□ -1.5
HDAC9-227ENST00000523867 D6R8Y8 96 aa5.7□□□□□ -1.5
HDAC9-227ENST00000523867 RPL27AP46776 148 aaKnown RBP5.7□□□□□ -1.5
HDAC9-227ENST00000523867 CD164Q04900 197 aa5.7□□□□□ -1.5
HDAC9-227ENST00000523867 LYPD2Q6UXB3 125 aa5.7□□□□□ -1.5
HDAC9-227ENST00000523867 GTSCR1Q86UQ5 136 aa5.7□□□□□ -1.5
HDAC9-227ENST00000523867 C3orf22Q8N5N4 141 aa5.7□□□□□ -1.5
HDAC9-227ENST00000523867 C15orf53Q8NAA6 179 aa5.7□□□□□ -1.5
HDAC9-227ENST00000523867 ODF3Q96PU9 254 aa5.7□□□□□ -1.5
HDAC9-227ENST00000523867 TRAV8-4A0A0B4J246 113 aa5.7□□□□□ -1.5
HDAC9-227ENST00000523867 LOC107984156A0A0G2JMH3 177 aa5.7□□□□□ -1.5
HDAC9-227ENST00000523867 LOC389332A0A1B0GUA5 103 aa5.7□□□□□ -1.5
HDAC9-227ENST00000523867 TMEM178BH3BS89 294 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms