RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 PAXXQ9BUH6 204 aa10.19□□□□□ -0.78
TRAPPC9-213ENST00000522504 TRAV4A0A0B4J268 109 aa10.18□□□□□ -0.78
TRAPPC9-213ENST00000522504 IGHV3-16A0A0C4DH30 117 aa10.18□□□□□ -0.78
TRAPPC9-213ENST00000522504 IGHV3-38A0A0C4DH36 116 aa10.18□□□□□ -0.78
TRAPPC9-213ENST00000522504 C9JCJ5 164 aa10.18□□□□□ -0.78
TRAPPC9-213ENST00000522504 GNRH2O43555 120 aa10.18□□□□□ -0.78
TRAPPC9-213ENST00000522504 PSCAO43653 123 aa10.18□□□□□ -0.78
TRAPPC9-213ENST00000522504 MPC2O95563 127 aa10.18□□□□□ -0.78
TRAPPC9-213ENST00000522504 PET100P0DJ07 73 aa10.18□□□□□ -0.78
TRAPPC9-213ENST00000522504 RANP62826 216 aaKnown RBP10.18□□□□□ -0.78
TRAPPC9-213ENST00000522504 AKAP14Q86UN6 197 aa10.18□□□□□ -0.78
TRAPPC9-213ENST00000522504 RBAKDNA6NC62 111 aa10.17□□□□□ -0.78
TRAPPC9-213ENST00000522504 IBA57-AS1B1ANH7 110 aa10.17□□□□□ -0.78
TRAPPC9-213ENST00000522504 WFDC2Q14508 124 aa10.17□□□□□ -0.78
TRAPPC9-213ENST00000522504 LINC01556Q5JQF7 62 aa10.17□□□□□ -0.78
TRAPPC9-213ENST00000522504 FAM159AQ6UWV7 190 aa10.17□□□□□ -0.78
TRAPPC9-213ENST00000522504 OR4C5Q8NGB2 326 aa10.17□□□□□ -0.78
TRAPPC9-213ENST00000522504 OR5C1Q8NGR4 320 aa10.17□□□□□ -0.78
TRAPPC9-213ENST00000522504 OR2T35Q8NGX2 323 aa10.17□□□□□ -0.78
TRAPPC9-213ENST00000522504 Q9HAA7 133 aa10.17□□□□□ -0.78
TRAPPC9-213ENST00000522504 OR5AC2Q9NZP5 309 aa10.17□□□□□ -0.78
TRAPPC9-213ENST00000522504 NAGKQ9UJ70 344 aa10.17□□□□□ -0.78
TRAPPC9-213ENST00000522504 TRGV11A0A075B6L2 103 aa10.16□□□□□ -0.78
TRAPPC9-213ENST00000522504 H0YIZ8 118 aa10.16□□□□□ -0.78
TRAPPC9-213ENST00000522504 SMLR1H3BR10 107 aa10.16□□□□□ -0.78
TRAPPC9-213ENST00000522504 GATA1P15976 413 aaPredicted RBP10.16□□□□□ -0.78
TRAPPC9-213ENST00000522504 TIRAPP58753 221 aa10.16□□□□□ -0.78
TRAPPC9-213ENST00000522504 TDRG1Q3Y452 100 aa10.16□□□□□ -0.78
TRAPPC9-213ENST00000522504 NHLRC2Q8NBF2 726 aa10.16□□□□□ -0.78
TRAPPC9-213ENST00000522504 MBD2Q9UBB5 411 aa10.16□□□□□ -0.78
TRAPPC9-213ENST00000522504 DIRC3C9JPN6 131 aa10.15□□□□□ -0.78
TRAPPC9-213ENST00000522504 M0R2P5 195 aa10.15□□□□□ -0.78
TRAPPC9-213ENST00000522504 EIF3GO75821 320 aaKnown RBP eCLIP10.15□□□□□ -0.78
TRAPPC9-213ENST00000522504 CSN1S1P47710 185 aa10.15□□□□□ -0.78
TRAPPC9-213ENST00000522504 Q5BKY6 102 aa10.15□□□□□ -0.78
TRAPPC9-213ENST00000522504 OR7C2O60412 319 aa10.14□□□□□ -0.79
TRAPPC9-213ENST00000522504 PPT1P50897 306 aa10.14□□□□□ -0.79
TRAPPC9-213ENST00000522504 Q8N3U1 123 aa10.14□□□□□ -0.79
TRAPPC9-213ENST00000522504 TVP23CQ96ET8 276 aa10.14□□□□□ -0.79
TRAPPC9-213ENST00000522504 WDR61Q9GZS3 305 aaKnown RBP10.14□□□□□ -0.79
TRAPPC9-213ENST00000522504 PKHD1L1Q86WI1 4243 aa10.13□□□□□ -0.79
TRAPPC9-213ENST00000522504 FXYD6-FXYD2A0A087WZ82 144 aa10.13□□□□□ -0.79
TRAPPC9-213ENST00000522504 KRTAP29-1A8MX34 341 aaPredicted RBP10.13□□□□□ -0.79
TRAPPC9-213ENST00000522504 G3V3Q6 166 aa10.13□□□□□ -0.79
TRAPPC9-213ENST00000522504 IGHV3-30P01768 117 aa10.13□□□□□ -0.79
TRAPPC9-213ENST00000522504 IGHV3-33P01772 117 aa10.13□□□□□ -0.79
TRAPPC9-213ENST00000522504 TYMSP04818 313 aa10.13□□□□□ -0.79
TRAPPC9-213ENST00000522504 IGHV3-30-3P0DP02 117 aa10.13□□□□□ -0.79
TRAPPC9-213ENST00000522504 IGHV3-30-5P0DP03 117 aa10.13□□□□□ -0.79
TRAPPC9-213ENST00000522504 UBE2L3P68036 154 aaKnown RBP10.13□□□□□ -0.79
TRAPPC9-213ENST00000522504 Q6ZSA8 131 aa10.13□□□□□ -0.79
TRAPPC9-213ENST00000522504 SH2D6Q7Z4S9 175 aa10.13□□□□□ -0.79
TRAPPC9-213ENST00000522504 TCTE3Q8IZS6 198 aa10.13□□□□□ -0.79
TRAPPC9-213ENST00000522504 SLC25A29Q8N8R3 303 aa10.13□□□□□ -0.79
TRAPPC9-213ENST00000522504 HYLS1Q96M11 299 aa10.13□□□□□ -0.79
TRAPPC9-213ENST00000522504 LENEPQ9Y5L5 61 aa10.13□□□□□ -0.79
TRAPPC9-213ENST00000522504 OR10J3Q5JRS4 329 aa10.12□□□□□ -0.79
TRAPPC9-213ENST00000522504 DPPA3Q6W0C5 159 aa10.12□□□□□ -0.79
TRAPPC9-213ENST00000522504 LINC00528Q8N1L1 170 aa10.12□□□□□ -0.79
TRAPPC9-213ENST00000522504 TRAV8-1A0A0A6YYK1 113 aa10.11□□□□□ -0.79
TRAPPC9-213ENST00000522504 F6UZH7 168 aa10.11□□□□□ -0.79
TRAPPC9-213ENST00000522504 PFDN1O60925 122 aa10.11□□□□□ -0.79
TRAPPC9-213ENST00000522504 C1QBP02746 253 aa10.11□□□□□ -0.79
TRAPPC9-213ENST00000522504 TMED6Q8WW62 240 aa10.11□□□□□ -0.79
TRAPPC9-213ENST00000522504 IGHV3-73A0A0B4J1V6 119 aa10.1□□□□□ -0.79
TRAPPC9-213ENST00000522504 TRAV8-6A0A0B4J262 113 aa10.1□□□□□ -0.79
TRAPPC9-213ENST00000522504 FBLL1A6NHQ2 334 aaKnown RBP10.1□□□□□ -0.79
TRAPPC9-213ENST00000522504 LECT2O14960 151 aa10.1□□□□□ -0.79
TRAPPC9-213ENST00000522504 PFN1P07737 140 aaKnown RBP10.1□□□□□ -0.79
TRAPPC9-213ENST00000522504 RPL12P30050 165 aaKnown RBP10.1□□□□□ -0.79
TRAPPC9-213ENST00000522504 CFAP126Q5VTH2 177 aa10.1□□□□□ -0.79
TRAPPC9-213ENST00000522504 RPH3ALQ9UNE2 315 aa10.1□□□□□ -0.79
TRAPPC9-213ENST00000522504 TRAV21A0A0B4J279 112 aa10.09□□□□□ -0.79
TRAPPC9-213ENST00000522504 ARPC5O15511 151 aa10.09□□□□□ -0.79
TRAPPC9-213ENST00000522504 PLA2G1BP04054 148 aaKnown RBP10.09□□□□□ -0.79
TRAPPC9-213ENST00000522504 LINC01620Q4KN68 170 aa10.09□□□□□ -0.79
TRAPPC9-213ENST00000522504 FFAR4Q5NUL3 377 aa10.09□□□□□ -0.79
TRAPPC9-213ENST00000522504 LELP1Q5T871 98 aa10.09□□□□□ -0.79
TRAPPC9-213ENST00000522504 GOLT1AQ6ZVE7 132 aa10.09□□□□□ -0.79
TRAPPC9-213ENST00000522504 C11orf21Q9P2W6 132 aa10.09□□□□□ -0.79
TRAPPC9-213ENST00000522504 TNFSF18Q9UNG2 199 aa10.09□□□□□ -0.79
TRAPPC9-213ENST00000522504 PGPA6NDG6 321 aa10.08□□□□□ -0.8
TRAPPC9-213ENST00000522504 RS1O15537 224 aa10.08□□□□□ -0.8
TRAPPC9-213ENST00000522504 KRTAP10-4P60372 401 aaPredicted RBP10.08□□□□□ -0.8
TRAPPC9-213ENST00000522504 ZNF876PQ49A33 203 aa10.08□□□□□ -0.8
TRAPPC9-213ENST00000522504 ZFP69Q49AA0 526 aa10.08□□□□□ -0.8
TRAPPC9-213ENST00000522504 INO80EQ8NBZ0 244 aaPredicted RBP10.08□□□□□ -0.8
TRAPPC9-213ENST00000522504 OR11H4Q8NGC9 324 aa10.08□□□□□ -0.8
TRAPPC9-213ENST00000522504 SDF2L1Q9HCN8 221 aa10.08□□□□□ -0.8
TRAPPC9-213ENST00000522504 OTORQ9NRC9 128 aa10.08□□□□□ -0.8
TRAPPC9-213ENST00000522504 KCNIP2Q9NS61 270 aa10.08□□□□□ -0.8
TRAPPC9-213ENST00000522504 HSPB11Q9Y547 144 aa10.08□□□□□ -0.8
TRAPPC9-213ENST00000522504 ZNF80P51504 273 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC9-213ENST00000522504 GNG5P63218 68 aa10.07□□□□□ -0.8
TRAPPC9-213ENST00000522504 KHDC3LQ587J8 217 aa10.07□□□□□ -0.8
TRAPPC9-213ENST00000522504 SGK494Q96LW2 274 aa10.07□□□□□ -0.8
TRAPPC9-213ENST00000522504 AQP10Q96PS8 301 aa10.07□□□□□ -0.8
TRAPPC9-213ENST00000522504 PRADC1Q9BSG0 188 aa10.07□□□□□ -0.8
TRAPPC9-213ENST00000522504 GTSF1LQ9H1H1 148 aa10.07□□□□□ -0.8
TRAPPC9-213ENST00000522504 TREM1Q9NP99 234 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms