RNA–Protein interactions for RNA: ENST00000522468.1

HMBOX1-209, Transcript of homeobox containing 1, humanhuman

TSL 3

Gene HMBOX1, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-209ENST00000522468 VSIG2Q96IQ7 327 aa9.71□□□□□ -0.86
HMBOX1-209ENST00000522468 LINC00467Q9BRT7 94 aa9.71□□□□□ -0.86
HMBOX1-209ENST00000522468 NKX6-2Q9C056 277 aaPredicted RBP9.71□□□□□ -0.86
HMBOX1-209ENST00000522468 PRELID1Q9Y255 219 aa9.71□□□□□ -0.86
HMBOX1-209ENST00000522468 MRPS16Q9Y3D3 137 aaKnown RBP9.71□□□□□ -0.86
HMBOX1-209ENST00000522468 ARL2-SNX15V9GYD0 113 aa9.71□□□□□ -0.86
HMBOX1-209ENST00000522468 FAT1Q14517 4588 aa9.71□□□□□ -0.86
HMBOX1-209ENST00000522468 A0A1W2PPQ1 181 aa9.7□□□□□ -0.86
HMBOX1-209ENST00000522468 J3KRW8 73 aa9.7□□□□□ -0.86
HMBOX1-209ENST00000522468 SLC25A5P05141 298 aaKnown RBP9.7□□□□□ -0.86
HMBOX1-209ENST00000522468 CSN1S1P47710 185 aa9.7□□□□□ -0.86
HMBOX1-209ENST00000522468 TTC32Q5I0X7 151 aa9.7□□□□□ -0.86
HMBOX1-209ENST00000522468 CMTM2Q8TAZ6 248 aa9.7□□□□□ -0.86
HMBOX1-209ENST00000522468 HERC1Q15751 4861 aa9.69□□□□□ -0.86
HMBOX1-209ENST00000522468 GGTLC3B5MD39 225 aa9.69□□□□□ -0.86
HMBOX1-209ENST00000522468 BTF3P20290 206 aaKnown RBP9.69□□□□□ -0.86
HMBOX1-209ENST00000522468 ERCC8Q13216 396 aa9.69□□□□□ -0.86
HMBOX1-209ENST00000522468 AGPAT4-IT1Q9H0P7 198 aa9.69□□□□□ -0.86
HMBOX1-209ENST00000522468 A0A096LPF7 62 aa9.68□□□□□ -0.86
HMBOX1-209ENST00000522468 C7orf71A4D174 169 aa9.68□□□□□ -0.86
HMBOX1-209ENST00000522468 RBFOX3A6NFN3 312 aa9.68□□□□□ -0.86
HMBOX1-209ENST00000522468 BCL2P10415 239 aa9.68□□□□□ -0.86
HMBOX1-209ENST00000522468 CRISP2P16562 243 aa9.68□□□□□ -0.86
HMBOX1-209ENST00000522468 TAGLN2P37802 199 aaKnown RBP9.68□□□□□ -0.86
HMBOX1-209ENST00000522468 KRTAP10-2P60368 255 aa9.68□□□□□ -0.86
HMBOX1-209ENST00000522468 ANXA2RQ3ZCQ2 193 aa9.68□□□□□ -0.86
HMBOX1-209ENST00000522468 C9orf47Q6ZRZ4 202 aa9.68□□□□□ -0.86
HMBOX1-209ENST00000522468 SPATA12Q7Z6I5 190 aa9.68□□□□□ -0.86
HMBOX1-209ENST00000522468 MAPKAPK5-AS1Q8N8E1 139 aa9.68□□□□□ -0.86
HMBOX1-209ENST00000522468 C5orf17Q8NAS9 161 aa9.68□□□□□ -0.86
HMBOX1-209ENST00000522468 FAM210AQ96ND0 272 aa9.68□□□□□ -0.86
HMBOX1-209ENST00000522468 TXNDC17Q9BRA2 123 aa9.68□□□□□ -0.86
HMBOX1-209ENST00000522468 EIF5A2Q9GZV4 153 aaKnown RBP9.68□□□□□ -0.86
HMBOX1-209ENST00000522468 GSN-AS1Q9NRJ2 163 aa9.68□□□□□ -0.86
HMBOX1-209ENST00000522468 VAX2Q9UIW0 290 aa9.68□□□□□ -0.86
HMBOX1-209ENST00000522468 EPDR1Q9UM22 224 aa9.68□□□□□ -0.86
HMBOX1-209ENST00000522468 RPH3ALQ9UNE2 315 aa9.68□□□□□ -0.86
HMBOX1-209ENST00000522468 SPINK4O60575 86 aa9.67□□□□□ -0.86
HMBOX1-209ENST00000522468 BTN1A1Q13410 526 aa9.67□□□□□ -0.86
HMBOX1-209ENST00000522468 TOR2AQ5JU69 321 aa9.67□□□□□ -0.86
HMBOX1-209ENST00000522468 PRR9Q5T870 116 aa9.67□□□□□ -0.86
HMBOX1-209ENST00000522468 Q6ZRN7 208 aaPredicted RBP9.67□□□□□ -0.86
HMBOX1-209ENST00000522468 LINC00477Q96M19 166 aa9.67□□□□□ -0.86
HMBOX1-209ENST00000522468 DIRC3C9JPN6 131 aa9.66□□□□□ -0.86
HMBOX1-209ENST00000522468 F6UZH7 168 aa9.66□□□□□ -0.86
HMBOX1-209ENST00000522468 TCL1AP56279 114 aa9.66□□□□□ -0.86
HMBOX1-209ENST00000522468 GNG5P63218 68 aa9.66□□□□□ -0.86
HMBOX1-209ENST00000522468 MEF2BQ02080 365 aaPredicted RBP9.66□□□□□ -0.86
HMBOX1-209ENST00000522468 ZNF506Q5JVG8 444 aa9.66□□□□□ -0.86
HMBOX1-209ENST00000522468 Q8N1X5 172 aa9.66□□□□□ -0.86
HMBOX1-209ENST00000522468 EIF4E3Q8N5X7 224 aaKnown RBP9.66□□□□□ -0.86
HMBOX1-209ENST00000522468 ZFAND2AQ8N6M9 145 aa9.66□□□□□ -0.86
HMBOX1-209ENST00000522468 ARL6IP6Q8N6S5 226 aa9.66□□□□□ -0.86
HMBOX1-209ENST00000522468 KLF12Q9Y4X4 402 aa9.66□□□□□ -0.86
HMBOX1-209ENST00000522468 TCRAP04437 139 aa9.65□□□□□ -0.86
HMBOX1-209ENST00000522468 Q6ZQT7 251 aa9.65□□□□□ -0.86
HMBOX1-209ENST00000522468 GOLT1AQ6ZVE7 132 aa9.65□□□□□ -0.86
HMBOX1-209ENST00000522468 HIST1H2BAQ96A08 127 aa9.65□□□□□ -0.86
HMBOX1-209ENST00000522468 TCEAL7Q9BRU2 100 aa9.65□□□□□ -0.86
HMBOX1-209ENST00000522468 TRGV2A0A075B6R0 118 aa9.64□□□□□ -0.87
HMBOX1-209ENST00000522468 IGKV2-40A0A087WW87 121 aaPredicted RBP9.64□□□□□ -0.87
HMBOX1-209ENST00000522468 TRGV1A0A0A0MS02 117 aa9.64□□□□□ -0.87
HMBOX1-209ENST00000522468 K7EQM0 130 aa9.64□□□□□ -0.87
HMBOX1-209ENST00000522468 PEX7O00628 323 aa9.64□□□□□ -0.87
HMBOX1-209ENST00000522468 PDE6DO43924 150 aa9.64□□□□□ -0.87
HMBOX1-209ENST00000522468 IGKV2D-40P01614 121 aaPredicted RBP9.64□□□□□ -0.87
HMBOX1-209ENST00000522468 RNASE4P34096 147 aaKnown RBP9.64□□□□□ -0.87
HMBOX1-209ENST00000522468 LINC00315P59091 139 aa9.64□□□□□ -0.87
HMBOX1-209ENST00000522468 PEA15Q15121 130 aa9.64□□□□□ -0.87
HMBOX1-209ENST00000522468 IBA57Q5T440 356 aaKnown RBP9.64□□□□□ -0.87
HMBOX1-209ENST00000522468 CYB561D1Q8N8Q1 229 aa9.64□□□□□ -0.87
HMBOX1-209ENST00000522468 VGLL1Q99990 258 aa9.64□□□□□ -0.87
HMBOX1-209ENST00000522468 TP53TG3Q9ULZ0 132 aa9.64□□□□□ -0.87
HMBOX1-209ENST00000522468 VPS13BQ7Z7G8 4022 aa9.64□□□□□ -0.87
HMBOX1-209ENST00000522468 SERTM2A0A1B0GWG4 89 aa9.63□□□□□ -0.87
HMBOX1-209ENST00000522468 SCO2A0A1W2PP80 73 aa9.63□□□□□ -0.87
HMBOX1-209ENST00000522468 RBAKDNA6NC62 111 aa9.63□□□□□ -0.87
HMBOX1-209ENST00000522468 GPX1P07203 203 aa9.63□□□□□ -0.87
HMBOX1-209ENST00000522468 MED9Q9NWA0 146 aa9.63□□□□□ -0.87
HMBOX1-209ENST00000522468 ZNF492Q9P255 531 aa9.63□□□□□ -0.87
HMBOX1-209ENST00000522468 RAB19A4D1S5 217 aa9.62□□□□□ -0.87
HMBOX1-209ENST00000522468 AKR1C3P42330 323 aa9.62□□□□□ -0.87
HMBOX1-209ENST00000522468 TMEM78Q5T7P6 136 aa9.62□□□□□ -0.87
HMBOX1-209ENST00000522468 SMDT1Q9H4I9 107 aa9.62□□□□□ -0.87
HMBOX1-209ENST00000522468 IGHV1OR15-1A0A075B7D0 117 aa9.61□□□□□ -0.87
HMBOX1-209ENST00000522468 TRAV8-1A0A0A6YYK1 113 aa9.61□□□□□ -0.87
HMBOX1-209ENST00000522468 TRAV34A0A0B4J273 112 aa9.61□□□□□ -0.87
HMBOX1-209ENST00000522468 TRBV7-9A0A0J9YWB2 115 aa9.61□□□□□ -0.87
HMBOX1-209ENST00000522468 LINC00862A6NCI5 91 aa9.61□□□□□ -0.87
HMBOX1-209ENST00000522468 TMEM250H0YL14 139 aa9.61□□□□□ -0.87
HMBOX1-209ENST00000522468 SIVA1O15304 175 aa9.61□□□□□ -0.87
HMBOX1-209ENST00000522468 UBE2G1P62253 170 aa9.61□□□□□ -0.87
HMBOX1-209ENST00000522468 SRSF3P84103 164 aaKnown RBP9.61□□□□□ -0.87
HMBOX1-209ENST00000522468 COMMD7Q86VX2 200 aa9.61□□□□□ -0.87
HMBOX1-209ENST00000522468 C11orf52Q96A22 123 aa9.61□□□□□ -0.87
HMBOX1-209ENST00000522468 SGK494Q96LW2 274 aa9.61□□□□□ -0.87
HMBOX1-209ENST00000522468 LINC00479Q96M42 142 aa9.61□□□□□ -0.87
HMBOX1-209ENST00000522468 TREM1Q9NP99 234 aa9.61□□□□□ -0.87
HMBOX1-209ENST00000522468 MYCBP2O75592 4640 aa9.6□□□□□ -0.87
HMBOX1-209ENST00000522468 FBLL1A6NHQ2 334 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms