RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 RNASE4P34096 147 aaKnown RBP13.85□□□□□ -0.19
TRAPPC9-210ENST00000521667 DUX3Q96PT4 197 aa13.85□□□□□ -0.19
TRAPPC9-210ENST00000521667 U3KQK5 164 aa13.85□□□□□ -0.19
TRAPPC9-210ENST00000521667 MTORP42345 2549 aa13.84□□□□□ -0.19
TRAPPC9-210ENST00000521667 MRPL51Q4U2R6 128 aaKnown RBP13.84□□□□□ -0.19
TRAPPC9-210ENST00000521667 DMRTA1Q5VZB9 504 aa13.84□□□□□ -0.19
TRAPPC9-210ENST00000521667 OR9G4Q8NGQ1 327 aa13.84□□□□□ -0.19
TRAPPC9-210ENST00000521667 RNF114Q9Y508 228 aa13.84□□□□□ -0.19
TRAPPC9-210ENST00000521667 D6R8Y8 96 aa13.83□□□□□ -0.2
TRAPPC9-210ENST00000521667 M0R2Z0 102 aa13.83□□□□□ -0.2
TRAPPC9-210ENST00000521667 OR5AL1P0C617 328 aa13.83□□□□□ -0.2
TRAPPC9-210ENST00000521667 LINC00614P0C842 121 aa13.83□□□□□ -0.2
TRAPPC9-210ENST00000521667 ZNF418Q8TF45 676 aaPredicted RBP13.83□□□□□ -0.2
TRAPPC9-210ENST00000521667 SNAI2O43623 268 aa13.83□□□□□ -0.2
TRAPPC9-210ENST00000521667 KRTDAPP60985 99 aa13.83□□□□□ -0.2
TRAPPC9-210ENST00000521667 ORMDL3Q8N138 153 aa13.83□□□□□ -0.2
TRAPPC9-210ENST00000521667 NF1P21359 2839 aa13.82□□□□□ -0.2
TRAPPC9-210ENST00000521667 A0A0J9YX75 114 aa13.82□□□□□ -0.2
TRAPPC9-210ENST00000521667 KLLNB2CW77 178 aa13.82□□□□□ -0.2
TRAPPC9-210ENST00000521667 KIR3DS1Q14943 382 aa13.82□□□□□ -0.2
TRAPPC9-210ENST00000521667 HIST2H2BDQ6DRA6 164 aa13.82□□□□□ -0.2
TRAPPC9-210ENST00000521667 OR10AG1Q8NH19 301 aa13.82□□□□□ -0.2
TRAPPC9-210ENST00000521667 DLX4Q92988 240 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC9-210ENST00000521667 C16orf95Q9H693 158 aa13.82□□□□□ -0.2
TRAPPC9-210ENST00000521667 PRELID3AQ96N28 172 aa13.81□□□□□ -0.2
TRAPPC9-210ENST00000521667 ODF3Q96PU9 254 aa13.81□□□□□ -0.2
TRAPPC9-210ENST00000521667 CSN3P07498 182 aa13.81□□□□□ -0.2
TRAPPC9-210ENST00000521667 HILS1P60008 231 aa13.81□□□□□ -0.2
TRAPPC9-210ENST00000521667 PKIAP61925 76 aa13.81□□□□□ -0.2
TRAPPC9-210ENST00000521667 ANXA2RQ3ZCQ2 193 aa13.81□□□□□ -0.2
TRAPPC9-210ENST00000521667 EBLN2Q6P2I7 272 aa13.81□□□□□ -0.2
TRAPPC9-210ENST00000521667 HIVEP1P15822 2718 aa13.8□□□□□ -0.2
TRAPPC9-210ENST00000521667 IGHV4-4A0A075B6R2 117 aa13.8□□□□□ -0.2
TRAPPC9-210ENST00000521667 H3BVH4 76 aa13.8□□□□□ -0.2
TRAPPC9-210ENST00000521667 CACNG7P62955 275 aa13.8□□□□□ -0.2
TRAPPC9-210ENST00000521667 LINC01006Q8NI28 216 aa13.8□□□□□ -0.2
TRAPPC9-210ENST00000521667 RNF185Q96GF1 192 aa13.8□□□□□ -0.2
TRAPPC9-210ENST00000521667 CD28P10747 220 aa13.8□□□□□ -0.2
TRAPPC9-210ENST00000521667 RAB4AP20338 218 aa13.8□□□□□ -0.2
TRAPPC9-210ENST00000521667 CKS2P33552 79 aa13.8□□□□□ -0.2
TRAPPC9-210ENST00000521667 LEPP41159 167 aa13.8□□□□□ -0.2
TRAPPC9-210ENST00000521667 IGHV1-24A0A0C4DH33 117 aa13.79□□□□□ -0.2
TRAPPC9-210ENST00000521667 C3orf79P0CE67 100 aa13.79□□□□□ -0.2
TRAPPC9-210ENST00000521667 ASIPP42127 132 aa13.79□□□□□ -0.2
TRAPPC9-210ENST00000521667 SPANXN1Q5VSR9 72 aa13.79□□□□□ -0.2
TRAPPC9-210ENST00000521667 ZNF664Q8N3J9 261 aa13.79□□□□□ -0.2
TRAPPC9-210ENST00000521667 C11orf44Q8N8P7 122 aa13.79□□□□□ -0.2
TRAPPC9-210ENST00000521667 TSTD3H0UI37 97 aa13.78□□□□□ -0.2
TRAPPC9-210ENST00000521667 PMCHL1Q16048 86 aa13.78□□□□□ -0.2
TRAPPC9-210ENST00000521667 PRSS3P2Q8NHM4 247 aa13.78□□□□□ -0.2
TRAPPC9-210ENST00000521667 RAX2Q96IS3 184 aa13.78□□□□□ -0.2
TRAPPC9-210ENST00000521667 PRO1933Q9H354 126 aa13.78□□□□□ -0.2
TRAPPC9-210ENST00000521667 HIVEP2P31629 2446 aa13.78□□□□□ -0.2
TRAPPC9-210ENST00000521667 TRAV2A0A0B4J234 112 aa13.78□□□□□ -0.2
TRAPPC9-210ENST00000521667 DUSP14O95147 198 aaKnown RBP13.78□□□□□ -0.2
TRAPPC9-210ENST00000521667 S100A4P26447 101 aaKnown RBP13.78□□□□□ -0.2
TRAPPC9-210ENST00000521667 FOXI2Q6ZQN5 318 aa13.78□□□□□ -0.2
TRAPPC9-210ENST00000521667 SMIM15Q7Z3B0 74 aa13.78□□□□□ -0.2
TRAPPC9-210ENST00000521667 ZMAT5Q9UDW3 170 aaKnown RBP13.78□□□□□ -0.2
TRAPPC9-210ENST00000521667 SMKR1H3BMG3 65 aa13.77□□□□□ -0.21
TRAPPC9-210ENST00000521667 PPBPP02775 128 aa13.77□□□□□ -0.21
TRAPPC9-210ENST00000521667 MED14OSP0DP75 135 aa13.77□□□□□ -0.21
TRAPPC9-210ENST00000521667 FA2HQ7L5A8 372 aa13.77□□□□□ -0.21
TRAPPC9-210ENST00000521667 Q8N976 141 aa13.77□□□□□ -0.21
TRAPPC9-210ENST00000521667 DYNLRB2Q8TF09 96 aa13.77□□□□□ -0.21
TRAPPC9-210ENST00000521667 TIMM8BQ9Y5J9 83 aaPredicted RBP13.77□□□□□ -0.21
TRAPPC9-210ENST00000521667 A0A1W2PRX2 142 aa13.76□□□□□ -0.21
TRAPPC9-210ENST00000521667 NCR2O95944 276 aa13.76□□□□□ -0.21
TRAPPC9-210ENST00000521667 FHL3Q13643 280 aa13.76□□□□□ -0.21
TRAPPC9-210ENST00000521667 TEX43Q6ZNM6 134 aa13.76□□□□□ -0.21
TRAPPC9-210ENST00000521667 TMEM61Q8N0U2 210 aa13.76□□□□□ -0.21
TRAPPC9-210ENST00000521667 AP5S1Q9NUS5 200 aa13.76□□□□□ -0.21
TRAPPC9-210ENST00000521667 BAHCC1Q9P281 2608 aa13.76□□□□□ -0.21
TRAPPC9-210ENST00000521667 C7orf71A4D174 169 aa13.76□□□□□ -0.21
TRAPPC9-210ENST00000521667 INAFM1C9JVW0 142 aa13.76□□□□□ -0.21
TRAPPC9-210ENST00000521667 IGKV3-20P01619 116 aa13.76□□□□□ -0.21
TRAPPC9-210ENST00000521667 EVI2AP22794 236 aa13.76□□□□□ -0.21
TRAPPC9-210ENST00000521667 CITED2Q99967 270 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC9-210ENST00000521667 SIGLEC8Q9NYZ4 499 aa13.76□□□□□ -0.21
TRAPPC9-210ENST00000521667 TSSC4Q9Y5U2 329 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC9-210ENST00000521667 GNRH2O43555 120 aa13.75□□□□□ -0.21
TRAPPC9-210ENST00000521667 NPYP01303 97 aa13.75□□□□□ -0.21
TRAPPC9-210ENST00000521667 IFI27P40305 119 aaPredicted RBP13.75□□□□□ -0.21
TRAPPC9-210ENST00000521667 FAM159AQ6UWV7 190 aa13.75□□□□□ -0.21
TRAPPC9-210ENST00000521667 SCRT2Q9NQ03 307 aa13.75□□□□□ -0.21
TRAPPC9-210ENST00000521667 SETXQ7Z333 2677 aaKnown RBP13.75□□□□□ -0.21
TRAPPC9-210ENST00000521667 TRAV12-3A0A0B4J271 114 aa13.74□□□□□ -0.21
TRAPPC9-210ENST00000521667 LOC389332A0A1B0GUA5 103 aa13.74□□□□□ -0.21
TRAPPC9-210ENST00000521667 CCL24O00175 119 aa13.74□□□□□ -0.21
TRAPPC9-210ENST00000521667 LEPROTL1O95214 131 aa13.74□□□□□ -0.21
TRAPPC9-210ENST00000521667 TSPOP30536 169 aa13.74□□□□□ -0.21
TRAPPC9-210ENST00000521667 CDKN1BP46527 198 aa13.74□□□□□ -0.21
TRAPPC9-210ENST00000521667 DEFB114Q30KQ6 69 aa13.74□□□□□ -0.21
TRAPPC9-210ENST00000521667 JMJD8Q96S16 334 aa13.74□□□□□ -0.21
TRAPPC9-210ENST00000521667 LAMTOR2Q9Y2Q5 125 aa13.74□□□□□ -0.21
TRAPPC9-210ENST00000521667 PHLDA3Q9Y5J5 127 aa13.74□□□□□ -0.21
TRAPPC9-210ENST00000521667 TCF21O43680 179 aa13.73□□□□□ -0.21
TRAPPC9-210ENST00000521667 NDUFA7O95182 113 aa13.73□□□□□ -0.21
TRAPPC9-210ENST00000521667 RNASE3P12724 160 aaKnown RBP13.73□□□□□ -0.21
TRAPPC9-210ENST00000521667 BTF3P20290 206 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms