RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 OR1L1Q8NH94 360 aa2.52□□□□□ -2.01
VPS13B-208ENST00000521037 RNASEH2CQ8TDP1 164 aaKnown RBP2.52□□□□□ -2.01
VPS13B-208ENST00000521037 TMEM56Q96MV1 263 aa2.52□□□□□ -2.01
VPS13B-208ENST00000521037 ZNF2Q9BSG1 426 aaPredicted RBP2.52□□□□□ -2.01
VPS13B-208ENST00000521037 NICN1Q9BSH3 213 aa2.52□□□□□ -2.01
VPS13B-208ENST00000521037 PECRQ9BY49 303 aa2.52□□□□□ -2.01
VPS13B-208ENST00000521037 METTL9Q9H1A3 318 aa2.52□□□□□ -2.01
VPS13B-208ENST00000521037 ZNF355PQ9NSJ1 428 aa2.52□□□□□ -2.01
VPS13B-208ENST00000521037 LYRM2Q9NU23 88 aaPredicted RBP2.52□□□□□ -2.01
VPS13B-208ENST00000521037 ANXA10Q9UJ72 324 aa2.52□□□□□ -2.01
VPS13B-208ENST00000521037 TMEM56-RWDD3S4R434 201 aa2.52□□□□□ -2.01
VPS13B-208ENST00000521037 IGHV3-35A0A0C4DH35 117 aa2.51□□□□□ -2.01
VPS13B-208ENST00000521037 LRCOL1A6NCL2 159 aa2.51□□□□□ -2.01
VPS13B-208ENST00000521037 C9JQL5 133 aa2.51□□□□□ -2.01
VPS13B-208ENST00000521037 E7EUB6 86 aa2.51□□□□□ -2.01
VPS13B-208ENST00000521037 H3BQ15 152 aa2.51□□□□□ -2.01
VPS13B-208ENST00000521037 SDCBPO00560 298 aaPredicted RBP2.51□□□□□ -2.01
VPS13B-208ENST00000521037 GEMIN2O14893 280 aaKnown RBP2.51□□□□□ -2.01
VPS13B-208ENST00000521037 AGPAT2O15120 278 aa2.51□□□□□ -2.01
VPS13B-208ENST00000521037 HMGB3O15347 200 aaKnown RBP2.51□□□□□ -2.01
VPS13B-208ENST00000521037 GGCTO75223 188 aaKnown RBP2.51□□□□□ -2.01
VPS13B-208ENST00000521037 DUSP14O95147 198 aaKnown RBP2.51□□□□□ -2.01
VPS13B-208ENST00000521037 GCGP01275 180 aa2.51□□□□□ -2.01
VPS13B-208ENST00000521037 IFNA5P01569 189 aa2.51□□□□□ -2.01
VPS13B-208ENST00000521037 SAA2P0DJI9 122 aaPredicted RBP2.51□□□□□ -2.01
VPS13B-208ENST00000521037 APELAP0DMC3 54 aa2.51□□□□□ -2.01
VPS13B-208ENST00000521037 RAB4AP20338 218 aa2.51□□□□□ -2.01
VPS13B-208ENST00000521037 FGF7P21781 194 aa2.51□□□□□ -2.01
VPS13B-208ENST00000521037 RPS10P46783 165 aaKnown RBP2.51□□□□□ -2.01
VPS13B-208ENST00000521037 SUB1P53999 127 aaKnown RBP eCLIP2.51□□□□□ -2.01
VPS13B-208ENST00000521037 TAS2R30P59541 319 aa2.51□□□□□ -2.01
VPS13B-208ENST00000521037 TAS2R60P59551 318 aa2.51□□□□□ -2.01
VPS13B-208ENST00000521037 OR2B8PP59922 312 aa2.51□□□□□ -2.01
VPS13B-208ENST00000521037 HLA-DRB3P79483 266 aa2.51□□□□□ -2.01
VPS13B-208ENST00000521037 SERF2P84101 59 aa2.51□□□□□ -2.01
VPS13B-208ENST00000521037 ELOBQ15370 118 aa2.51□□□□□ -2.01
VPS13B-208ENST00000521037 MPV17LQ2QL34 196 aa2.51□□□□□ -2.01
VPS13B-208ENST00000521037 MORN2Q502X0 79 aa2.51□□□□□ -2.01
VPS13B-208ENST00000521037 COA6Q5JTJ3 125 aaKnown RBP2.51□□□□□ -2.01
VPS13B-208ENST00000521037 AKR1C8PQ5T2L2 129 aa2.51□□□□□ -2.01
VPS13B-208ENST00000521037 OR2G3Q8NGZ4 309 aa2.51□□□□□ -2.01
VPS13B-208ENST00000521037 FAM213BQ8TBF2 198 aa2.51□□□□□ -2.01
VPS13B-208ENST00000521037 MBD3L1Q8WWY6 194 aa2.51□□□□□ -2.01
VPS13B-208ENST00000521037 ACY3Q96HD9 319 aa2.51□□□□□ -2.01
VPS13B-208ENST00000521037 AGMATQ9BSE5 352 aa2.51□□□□□ -2.01
VPS13B-208ENST00000521037 C2orf88Q9BSF0 95 aa2.51□□□□□ -2.01
VPS13B-208ENST00000521037 PSMG3Q9BT73 122 aaPredicted RBP2.51□□□□□ -2.01
VPS13B-208ENST00000521037 PARD6GQ9BYG4 376 aaPredicted RBP2.51□□□□□ -2.01
VPS13B-208ENST00000521037 TMEM222Q9H0R3 208 aa2.51□□□□□ -2.01
VPS13B-208ENST00000521037 CLEC5AQ9NY25 188 aa2.51□□□□□ -2.01
VPS13B-208ENST00000521037 MRPL27Q9P0M9 148 aaKnown RBP2.51□□□□□ -2.01
VPS13B-208ENST00000521037 DOK5Q9P104 306 aa2.51□□□□□ -2.01
VPS13B-208ENST00000521037 AK3Q9UIJ7 227 aa2.51□□□□□ -2.01
VPS13B-208ENST00000521037 VAX2Q9UIW0 290 aa2.51□□□□□ -2.01
VPS13B-208ENST00000521037 LSM5Q9Y4Y9 91 aaKnown RBP2.51□□□□□ -2.01
VPS13B-208ENST00000521037 S4R3C0 116 aa2.51□□□□□ -2.01
VPS13B-208ENST00000521037 TRBV6-6A0A0A6YYG2 114 aa2.5□□□□□ -2.01
VPS13B-208ENST00000521037 C3orf85A0A1B0GTC6 90 aa2.5□□□□□ -2.01
VPS13B-208ENST00000521037 A0A1B0GU03 582 aa2.5□□□□□ -2.01
VPS13B-208ENST00000521037 A6NDN8 102 aa2.5□□□□□ -2.01
VPS13B-208ENST00000521037 FAM223BA6NKX1 122 aa2.5□□□□□ -2.01
VPS13B-208ENST00000521037 ZNF705FA8MVS1 300 aaPredicted RBP2.5□□□□□ -2.01
VPS13B-208ENST00000521037 TMEM250H0YL14 139 aa2.5□□□□□ -2.01
VPS13B-208ENST00000521037 DEGS1O15121 323 aa2.5□□□□□ -2.01
VPS13B-208ENST00000521037 HIST1H2BKO60814 126 aa2.5□□□□□ -2.01
VPS13B-208ENST00000521037 PDCD6O75340 191 aa2.5□□□□□ -2.01
VPS13B-208ENST00000521037 ZNF253O75346 499 aa2.5□□□□□ -2.01
VPS13B-208ENST00000521037 MPDU1O75352 247 aa2.5□□□□□ -2.01
VPS13B-208ENST00000521037 IGHV3-23P01764 117 aa2.5□□□□□ -2.01
VPS13B-208ENST00000521037 HIST1H2BJP06899 126 aa2.5□□□□□ -2.01
VPS13B-208ENST00000521037 SRP19P09132 144 aaKnown RBP2.5□□□□□ -2.01
VPS13B-208ENST00000521037 ZNF705DP0CH99 300 aaPredicted RBP2.5□□□□□ -2.01
VPS13B-208ENST00000521037 ZNF705BP0CI00 300 aaPredicted RBP2.5□□□□□ -2.01
VPS13B-208ENST00000521037 OR13C7P0DN81 318 aa2.5□□□□□ -2.01
VPS13B-208ENST00000521037 HIST1H2BOP23527 126 aa2.5□□□□□ -2.01
VPS13B-208ENST00000521037 ATP6V0CP27449 155 aa2.5□□□□□ -2.01
VPS13B-208ENST00000521037 DDTP30046 118 aa2.5□□□□□ -2.01
VPS13B-208ENST00000521037 HIST1H2BBP33778 126 aa2.5□□□□□ -2.01
VPS13B-208ENST00000521037 HIST1H2BDP58876 126 aa2.5□□□□□ -2.01
VPS13B-208ENST00000521037 SPCS3P61009 180 aa2.5□□□□□ -2.01
VPS13B-208ENST00000521037 SELENOTP62341 195 aa2.5□□□□□ -2.01
VPS13B-208ENST00000521037 HIST1H2BCP62807 126 aa2.5□□□□□ -2.01
VPS13B-208ENST00000521037 HBG1P69891 147 aa2.5□□□□□ -2.01
VPS13B-208ENST00000521037 HBG2P69892 147 aa2.5□□□□□ -2.01
VPS13B-208ENST00000521037 JOSD1Q15040 202 aaPredicted RBP2.5□□□□□ -2.01
VPS13B-208ENST00000521037 ZNF726P1Q15940 193 aa2.5□□□□□ -2.01
VPS13B-208ENST00000521037 HIST2H2BEQ16778 126 aa2.5□□□□□ -2.01
VPS13B-208ENST00000521037 IQCJQ1A5X6 159 aa2.5□□□□□ -2.01
VPS13B-208ENST00000521037 C15orf32Q32M92 178 aa2.5□□□□□ -2.01
VPS13B-208ENST00000521037 ACOT6Q3I5F7 207 aaPredicted RBP2.5□□□□□ -2.01
VPS13B-208ENST00000521037 PIGYQ3MUY2 71 aa2.5□□□□□ -2.01
VPS13B-208ENST00000521037 RPL39P5Q59GN2 51 aa2.5□□□□□ -2.01
VPS13B-208ENST00000521037 PYY3Q5JQD4 70 aa2.5□□□□□ -2.01
VPS13B-208ENST00000521037 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.5□□□□□ -2.01
VPS13B-208ENST00000521037 LCE3AQ5TA76 89 aa2.5□□□□□ -2.01
VPS13B-208ENST00000521037 ZNF705AQ6ZN79 300 aaPredicted RBP2.5□□□□□ -2.01
VPS13B-208ENST00000521037 ZNF497Q6ZNH5 498 aa2.5□□□□□ -2.01
VPS13B-208ENST00000521037 LYZL2Q7Z4W2 148 aa2.5□□□□□ -2.01
VPS13B-208ENST00000521037 FAM223AQ8IWN6 122 aa2.5□□□□□ -2.01
VPS13B-208ENST00000521037 TMEM183AQ8IXX5 376 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms