RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 DLX4Q92988 240 aaPredicted RBP2.81□□□□□ -1.96
CLK4-207ENST00000520909 RPUSD4Q96CM3 377 aaKnown RBP2.81□□□□□ -1.96
CLK4-207ENST00000520909 LINC00052Q96N35 136 aa2.81□□□□□ -1.96
CLK4-207ENST00000520909 GPR82Q96P67 336 aa2.81□□□□□ -1.96
CLK4-207ENST00000520909 RHPN1-AS1Q9BWJ2 59 aa2.81□□□□□ -1.96
CLK4-207ENST00000520909 SMDT1Q9H4I9 107 aa2.81□□□□□ -1.96
CLK4-207ENST00000520909 DAZ1Q9NQZ3 744 aaKnown RBP2.81□□□□□ -1.96
CLK4-207ENST00000520909 SMPXQ9UHP9 88 aa2.81□□□□□ -1.96
CLK4-207ENST00000520909 RPH3ALQ9UNE2 315 aa2.81□□□□□ -1.96
CLK4-207ENST00000520909 ARL2-SNX15V9GYD0 113 aa2.81□□□□□ -1.96
CLK4-207ENST00000520909 CMYA5Q8N3K9 4069 aa2.8□□□□□ -1.96
CLK4-207ENST00000520909 IGKV3-7A0A075B6H7 116 aa2.8□□□□□ -1.96
CLK4-207ENST00000520909 FAM168BA1KXE4 195 aa2.8□□□□□ -1.96
CLK4-207ENST00000520909 TMEM213A2RRL7 107 aa2.8□□□□□ -1.96
CLK4-207ENST00000520909 HELTA6NFD8 242 aa2.8□□□□□ -1.96
CLK4-207ENST00000520909 C2orf70A6NJV1 201 aa2.8□□□□□ -1.96
CLK4-207ENST00000520909 F6UZH7 168 aa2.8□□□□□ -1.96
CLK4-207ENST00000520909 TMEM250H0YL14 139 aa2.8□□□□□ -1.96
CLK4-207ENST00000520909 LGALS9O00182 355 aa2.8□□□□□ -1.96
CLK4-207ENST00000520909 SLC17A3O00476 420 aa2.8□□□□□ -1.96
CLK4-207ENST00000520909 CHEK1O14757 476 aa2.8□□□□□ -1.96
CLK4-207ENST00000520909 MRPS12O15235 138 aaKnown RBP2.8□□□□□ -1.96
CLK4-207ENST00000520909 NXPH4O95158 308 aa2.8□□□□□ -1.96
CLK4-207ENST00000520909 APOC3P02656 99 aa2.8□□□□□ -1.96
CLK4-207ENST00000520909 IGLC2P0DOY2 106 aa2.8□□□□□ -1.96
CLK4-207ENST00000520909 PRB4P10163 310 aaPredicted RBP2.8□□□□□ -1.96
CLK4-207ENST00000520909 CBLN1P23435 193 aa2.8□□□□□ -1.96
CLK4-207ENST00000520909 GNG5P63218 68 aa2.8□□□□□ -1.96
CLK4-207ENST00000520909 PSG9Q00887 426 aa2.8□□□□□ -1.96
CLK4-207ENST00000520909 Q1RN00 199 aa2.8□□□□□ -1.96
CLK4-207ENST00000520909 SIGLEC15Q6ZMC9 328 aa2.8□□□□□ -1.96
CLK4-207ENST00000520909 TCF24Q7RTU0 167 aa2.8□□□□□ -1.96
CLK4-207ENST00000520909 NDUFA11Q86Y39 141 aa2.8□□□□□ -1.96
CLK4-207ENST00000520909 EXOC3-AS1Q8N2X6 119 aa2.8□□□□□ -1.96
CLK4-207ENST00000520909 CMTM2Q8TAZ6 248 aa2.8□□□□□ -1.96
CLK4-207ENST00000520909 SMIM7Q9BQ49 75 aa2.8□□□□□ -1.96
CLK4-207ENST00000520909 TXNDC17Q9BRA2 123 aa2.8□□□□□ -1.96
CLK4-207ENST00000520909 NKX6-2Q9C056 277 aaPredicted RBP2.8□□□□□ -1.96
CLK4-207ENST00000520909 Q9H3A6 140 aa2.8□□□□□ -1.96
CLK4-207ENST00000520909 OTORQ9NRC9 128 aa2.8□□□□□ -1.96
CLK4-207ENST00000520909 EPDR1Q9UM22 224 aa2.8□□□□□ -1.96
CLK4-207ENST00000520909 TENM1Q9UKZ4 2725 aa2.8□□□□□ -1.96
CLK4-207ENST00000520909 A0A087X0K7 114 aa2.79□□□□□ -1.96
CLK4-207ENST00000520909 TRAV34A0A0B4J273 112 aa2.79□□□□□ -1.96
CLK4-207ENST00000520909 ZNF727A8MUV8 499 aa2.79□□□□□ -1.96
CLK4-207ENST00000520909 ZNF705FA8MVS1 300 aaPredicted RBP2.79□□□□□ -1.96
CLK4-207ENST00000520909 A8MWP6 167 aa2.79□□□□□ -1.96
CLK4-207ENST00000520909 M0R036 132 aa2.79□□□□□ -1.96
CLK4-207ENST00000520909 DNASE2O00115 360 aaPredicted RBP2.79□□□□□ -1.96
CLK4-207ENST00000520909 PEX7O00628 323 aa2.79□□□□□ -1.96
CLK4-207ENST00000520909 OVOL1O14753 267 aa2.79□□□□□ -1.96
CLK4-207ENST00000520909 NDUFS6O75380 124 aaKnown RBP2.79□□□□□ -1.96
CLK4-207ENST00000520909 CSN3P07498 182 aa2.79□□□□□ -1.96
CLK4-207ENST00000520909 ADCYAP1P18509 176 aa2.79□□□□□ -1.96
CLK4-207ENST00000520909 HLA-DMBP28068 263 aa2.79□□□□□ -1.96
CLK4-207ENST00000520909 MYCNOSP40205 109 aa2.79□□□□□ -1.96
CLK4-207ENST00000520909 AKR1C3P42330 323 aa2.79□□□□□ -1.96
CLK4-207ENST00000520909 RPL35P42766 123 aaKnown RBP2.79□□□□□ -1.96
CLK4-207ENST00000520909 CSN1S1P47710 185 aa2.79□□□□□ -1.96
CLK4-207ENST00000520909 TFPI2P48307 235 aa2.79□□□□□ -1.96
CLK4-207ENST00000520909 MEOX2P50222 304 aa2.79□□□□□ -1.96
CLK4-207ENST00000520909 CNN1P51911 297 aaKnown RBP2.79□□□□□ -1.96
CLK4-207ENST00000520909 RIPPLY3P57055 190 aa2.79□□□□□ -1.96
CLK4-207ENST00000520909 PDE6HQ13956 83 aa2.79□□□□□ -1.96
CLK4-207ENST00000520909 GUCA2BQ16661 112 aa2.79□□□□□ -1.96
CLK4-207ENST00000520909 TMEM241Q24JQ0 296 aa2.79□□□□□ -1.96
CLK4-207ENST00000520909 FAM74A3Q4VXF1 159 aa2.79□□□□□ -1.96
CLK4-207ENST00000520909 C10orf91Q5T1B1 145 aa2.79□□□□□ -1.96
CLK4-207ENST00000520909 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.79□□□□□ -1.96
CLK4-207ENST00000520909 ADAMTSL5Q6ZMM2 481 aa2.79□□□□□ -1.96
CLK4-207ENST00000520909 GOLT1AQ6ZVE7 132 aa2.79□□□□□ -1.96
CLK4-207ENST00000520909 LYPD1Q8N2G4 141 aa2.79□□□□□ -1.96
CLK4-207ENST00000520909 RNF182Q8N6D2 247 aa2.79□□□□□ -1.96
CLK4-207ENST00000520909 C5orf17Q8NAS9 161 aa2.79□□□□□ -1.96
CLK4-207ENST00000520909 OR9G4Q8NGQ1 327 aa2.79□□□□□ -1.96
CLK4-207ENST00000520909 DYNLRB2Q8TF09 96 aa2.79□□□□□ -1.96
CLK4-207ENST00000520909 HIST1H2BAQ96A08 127 aa2.79□□□□□ -1.96
CLK4-207ENST00000520909 C11orf52Q96A22 123 aa2.79□□□□□ -1.96
CLK4-207ENST00000520909 NIPSNAP3BQ9BS92 247 aa2.79□□□□□ -1.96
CLK4-207ENST00000520909 DERL1Q9BUN8 251 aa2.79□□□□□ -1.96
CLK4-207ENST00000520909 SEC11CQ9BY50 192 aa2.79□□□□□ -1.96
CLK4-207ENST00000520909 NRN1Q9NPD7 142 aa2.79□□□□□ -1.96
CLK4-207ENST00000520909 ZNF331Q9NQX6 463 aaPredicted RBP2.79□□□□□ -1.96
CLK4-207ENST00000520909 MLXQ9UH92 298 aa2.79□□□□□ -1.96
CLK4-207ENST00000520909 CARHSP1Q9Y2V2 147 aaKnown RBP2.79□□□□□ -1.96
CLK4-207ENST00000520909 COL6A5A8TX70 2615 aa2.79□□□□□ -1.96
CLK4-207ENST00000520909 FBN1P35555 2871 aaKnown RBP2.79□□□□□ -1.96
CLK4-207ENST00000520909 TRRAPQ9Y4A5 3859 aa2.79□□□□□ -1.96
CLK4-207ENST00000520909 SORL1Q92673 2214 aa2.78□□□□□ -1.96
CLK4-207ENST00000520909 ANK2Q01484 3957 aa2.78□□□□□ -1.96
CLK4-207ENST00000520909 IGKV2-40A0A087WW87 121 aaPredicted RBP2.78□□□□□ -1.96
CLK4-207ENST00000520909 TRAV8-2A0A0B4J237 113 aa2.78□□□□□ -1.96
CLK4-207ENST00000520909 K7EQM0 130 aa2.78□□□□□ -1.96
CLK4-207ENST00000520909 M0R3E3 92 aa2.78□□□□□ -1.96
CLK4-207ENST00000520909 ISLRO14498 428 aa2.78□□□□□ -1.96
CLK4-207ENST00000520909 ZNF253O75346 499 aa2.78□□□□□ -1.96
CLK4-207ENST00000520909 IGKV2D-40P01614 121 aaPredicted RBP2.78□□□□□ -1.96
CLK4-207ENST00000520909 TCRAP04437 139 aa2.78□□□□□ -1.96
CLK4-207ENST00000520909 S100A9P06702 114 aaKnown RBP2.78□□□□□ -1.96
CLK4-207ENST00000520909 ID1P41134 155 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms