RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 TVP23CQ96ET8 276 aa13.32□□□□□ -0.28
PABPC1-215ENST00000520804 TXNDC17Q9BRA2 123 aa13.32□□□□□ -0.28
PABPC1-215ENST00000520804 A0A087WTM6 91 aa13.31□□□□□ -0.28
PABPC1-215ENST00000520804 TYMSP04818 313 aa13.31□□□□□ -0.28
PABPC1-215ENST00000520804 DNAH10OSP0CZ25 163 aa13.31□□□□□ -0.28
PABPC1-215ENST00000520804 EVI2AP22794 236 aa13.31□□□□□ -0.28
PABPC1-215ENST00000520804 DEFA1P59665 94 aa13.31□□□□□ -0.28
PABPC1-215ENST00000520804 DEFA3P59666 94 aa13.31□□□□□ -0.28
PABPC1-215ENST00000520804 RAB2AP61019 212 aa13.31□□□□□ -0.28
PABPC1-215ENST00000520804 TREM1Q9NP99 234 aa13.31□□□□□ -0.28
PABPC1-215ENST00000520804 MSRB1Q9NZV6 116 aa13.31□□□□□ -0.28
PABPC1-215ENST00000520804 TRAV8-1A0A0A6YYK1 113 aa13.3□□□□□ -0.28
PABPC1-215ENST00000520804 F6UZH7 168 aa13.3□□□□□ -0.28
PABPC1-215ENST00000520804 HMGB3O15347 200 aaKnown RBP13.29□□□□□ -0.28
PABPC1-215ENST00000520804 GNG5P63218 68 aa13.29□□□□□ -0.28
PABPC1-215ENST00000520804 OR10G9Q8NGN4 311 aa13.29□□□□□ -0.28
PABPC1-215ENST00000520804 OR10G7Q8NGN6 311 aa13.29□□□□□ -0.28
PABPC1-215ENST00000520804 SDF2L1Q9HCN8 221 aa13.29□□□□□ -0.28
PABPC1-215ENST00000520804 LOC100131303A0A0U1RQF7 123 aa13.28□□□□□ -0.28
PABPC1-215ENST00000520804 SH2D6Q7Z4S9 175 aa13.28□□□□□ -0.28
PABPC1-215ENST00000520804 KCNS1Q96KK3 526 aa13.28□□□□□ -0.28
PABPC1-215ENST00000520804 EPM2AB3EWF7 344 aa13.27□□□□□ -0.29
PABPC1-215ENST00000520804 XGP55808 180 aa13.27□□□□□ -0.29
PABPC1-215ENST00000520804 ASB13Q8WXK3 278 aa13.27□□□□□ -0.29
PABPC1-215ENST00000520804 FAT1Q14517 4588 aa13.27□□□□□ -0.29
PABPC1-215ENST00000520804 SERTM2A0A1B0GWG4 89 aa13.26□□□□□ -0.29
PABPC1-215ENST00000520804 CRYGDP07320 174 aa13.26□□□□□ -0.29
PABPC1-215ENST00000520804 ARL14EPLP0DKL9 152 aa13.26□□□□□ -0.29
PABPC1-215ENST00000520804 GATA1P15976 413 aaPredicted RBP13.26□□□□□ -0.29
PABPC1-215ENST00000520804 TIRAPP58753 221 aa13.26□□□□□ -0.29
PABPC1-215ENST00000520804 C10orf126Q8N4M7 172 aa13.26□□□□□ -0.29
PABPC1-215ENST00000520804 SGK494Q96LW2 274 aa13.26□□□□□ -0.29
PABPC1-215ENST00000520804 STAG3L2P0CL84 134 aa13.25□□□□□ -0.29
PABPC1-215ENST00000520804 STAG3L3P0CL85 134 aa13.25□□□□□ -0.29
PABPC1-215ENST00000520804 CDC34P49427 236 aaPredicted RBP13.25□□□□□ -0.29
PABPC1-215ENST00000520804 KRTAP10-1P60331 282 aa13.25□□□□□ -0.29
PABPC1-215ENST00000520804 NHLRC2Q8NBF2 726 aa13.25□□□□□ -0.29
PABPC1-215ENST00000520804 OR2G3Q8NGZ4 309 aa13.25□□□□□ -0.29
PABPC1-215ENST00000520804 NDFIP1Q9BT67 221 aa13.25□□□□□ -0.29
PABPC1-215ENST00000520804 TCRAP04437 139 aa13.24□□□□□ -0.29
PABPC1-215ENST00000520804 PPT1P50897 306 aa13.24□□□□□ -0.29
PABPC1-215ENST00000520804 SUN5Q8TC36 379 aa13.24□□□□□ -0.29
PABPC1-215ENST00000520804 IGHV3-38A0A0C4DH36 116 aa13.23□□□□□ -0.29
PABPC1-215ENST00000520804 FBLL1A6NHQ2 334 aaKnown RBP13.23□□□□□ -0.29
PABPC1-215ENST00000520804 ZNF80P51504 273 aaPredicted RBP13.23□□□□□ -0.29
PABPC1-215ENST00000520804 ZNF876PQ49A33 203 aa13.23□□□□□ -0.29
PABPC1-215ENST00000520804 C5orf17Q8NAS9 161 aa13.23□□□□□ -0.29
PABPC1-215ENST00000520804 C11orf21Q9P2W6 132 aa13.23□□□□□ -0.29
PABPC1-215ENST00000520804 RS1O15537 224 aa13.22□□□□□ -0.29
PABPC1-215ENST00000520804 CIDEAO60543 219 aa13.22□□□□□ -0.29
PABPC1-215ENST00000520804 SLC25A29Q8N8R3 303 aa13.22□□□□□ -0.29
PABPC1-215ENST00000520804 HSD17B11Q8NBQ5 300 aa13.22□□□□□ -0.29
PABPC1-215ENST00000520804 RAB24Q969Q5 203 aa13.22□□□□□ -0.29
PABPC1-215ENST00000520804 PSMG3Q9BT73 122 aaPredicted RBP13.22□□□□□ -0.29
PABPC1-215ENST00000520804 PSG8Q9UQ74 426 aa13.22□□□□□ -0.29
PABPC1-215ENST00000520804 ALG5Q9Y673 324 aa13.22□□□□□ -0.29
PABPC1-215ENST00000520804 K7EQM0 130 aa13.21□□□□□ -0.29
PABPC1-215ENST00000520804 TAAR5O14804 337 aa13.21□□□□□ -0.29
PABPC1-215ENST00000520804 GCGP01275 180 aa13.21□□□□□ -0.29
PABPC1-215ENST00000520804 PFN1P07737 140 aaKnown RBP13.21□□□□□ -0.29
PABPC1-215ENST00000520804 GCHFRP30047 84 aa13.21□□□□□ -0.29
PABPC1-215ENST00000520804 LINC01556Q5JQF7 62 aa13.21□□□□□ -0.29
PABPC1-215ENST00000520804 CFAP126Q5VTH2 177 aa13.21□□□□□ -0.29
PABPC1-215ENST00000520804 DPPA3Q6W0C5 159 aa13.21□□□□□ -0.29
PABPC1-215ENST00000520804 TRBV6-4A0A1B0GX49 114 aa13.2□□□□□ -0.3
PABPC1-215ENST00000520804 IGLV2-11P01706 119 aa13.2□□□□□ -0.3
PABPC1-215ENST00000520804 ATP6V0CP27449 155 aa13.2□□□□□ -0.3
PABPC1-215ENST00000520804 RHOHQ15669 191 aa13.2□□□□□ -0.3
PABPC1-215ENST00000520804 TMEM75Q8N9X5 138 aa13.2□□□□□ -0.3
PABPC1-215ENST00000520804 C9orf85Q96MD7 179 aa13.2□□□□□ -0.3
PABPC1-215ENST00000520804 AQP10Q96PS8 301 aa13.2□□□□□ -0.3
PABPC1-215ENST00000520804 PRADC1Q9BSG0 188 aa13.2□□□□□ -0.3
PABPC1-215ENST00000520804 TRAV8-6A0A0B4J262 113 aa13.19□□□□□ -0.3
PABPC1-215ENST00000520804 MBP02144 154 aa13.19□□□□□ -0.3
PABPC1-215ENST00000520804 GCSHP23434 173 aa13.19□□□□□ -0.3
PABPC1-215ENST00000520804 SUMO1P63165 101 aaKnown RBP13.19□□□□□ -0.3
PABPC1-215ENST00000520804 SERF2P84101 59 aa13.19□□□□□ -0.3
PABPC1-215ENST00000520804 PTH2Q96A98 100 aa13.19□□□□□ -0.3
PABPC1-215ENST00000520804 EPDR1Q9UM22 224 aa13.19□□□□□ -0.3
PABPC1-215ENST00000520804 BOLA1Q9Y3E2 137 aa13.19□□□□□ -0.3
PABPC1-215ENST00000520804 IGHV3-73A0A0B4J1V6 119 aa13.18□□□□□ -0.3
PABPC1-215ENST00000520804 LRCOL1A6NCL2 159 aa13.18□□□□□ -0.3
PABPC1-215ENST00000520804 IBA57-AS1B1ANH7 110 aa13.18□□□□□ -0.3
PABPC1-215ENST00000520804 GGTLC3B5MD39 225 aa13.18□□□□□ -0.3
PABPC1-215ENST00000520804 PSCAO43653 123 aa13.18□□□□□ -0.3
PABPC1-215ENST00000520804 FLI1Q01543 452 aaPredicted RBP13.18□□□□□ -0.3
PABPC1-215ENST00000520804 ZFP69Q49AA0 526 aa13.18□□□□□ -0.3
PABPC1-215ENST00000520804 SMUG1Q53HV7 270 aa13.18□□□□□ -0.3
PABPC1-215ENST00000520804 OR10J3Q5JRS4 329 aa13.18□□□□□ -0.3
PABPC1-215ENST00000520804 PRNTQ86SH4 94 aa13.18□□□□□ -0.3
PABPC1-215ENST00000520804 TMEM167BQ9NRX6 74 aa13.18□□□□□ -0.3
PABPC1-215ENST00000520804 PGPEP1LA6NFU8 196 aa13.17□□□□□ -0.3
PABPC1-215ENST00000520804 CXorf1O96002 111 aa13.17□□□□□ -0.3
PABPC1-215ENST00000520804 ZNF506Q5JVG8 444 aa13.17□□□□□ -0.3
PABPC1-215ENST00000520804 CYB561D1Q8N8Q1 229 aa13.17□□□□□ -0.3
PABPC1-215ENST00000520804 INAFM2P0DMQ5 153 aa13.16□□□□□ -0.3
PABPC1-215ENST00000520804 MGST1P10620 155 aaKnown RBP13.16□□□□□ -0.3
PABPC1-215ENST00000520804 RNASE3P12724 160 aaKnown RBP13.16□□□□□ -0.3
PABPC1-215ENST00000520804 SAPCD1Q5SSQ6 148 aa13.16□□□□□ -0.3
PABPC1-215ENST00000520804 LELP1Q5T871 98 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms