RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 EBLN2Q6P2I7 272 aa1.91□□□□□ -2.1
HDAC2-208ENST00000520746 TOMM20LQ6UXN7 152 aa1.91□□□□□ -2.1
HDAC2-208ENST00000520746 FAM24BQ8N5W8 94 aa1.91□□□□□ -2.1
HDAC2-208ENST00000520746 RNASE11Q8TAA1 199 aaKnown RBP1.91□□□□□ -2.1
HDAC2-208ENST00000520746 Q8WTZ3 238 aa1.91□□□□□ -2.1
HDAC2-208ENST00000520746 LSM10Q969L4 123 aaKnown RBP1.91□□□□□ -2.1
HDAC2-208ENST00000520746 RSG1Q9BU20 258 aa1.91□□□□□ -2.1
HDAC2-208ENST00000520746 PDCD10Q9BUL8 212 aa1.91□□□□□ -2.1
HDAC2-208ENST00000520746 NXF2Q9GZY0 626 aaKnown RBP1.91□□□□□ -2.1
HDAC2-208ENST00000520746 IFT46Q9NQC8 304 aa1.91□□□□□ -2.1
HDAC2-208ENST00000520746 C8orf17Q9NRJ1 99 aa1.91□□□□□ -2.1
HDAC2-208ENST00000520746 COPZ2Q9P299 210 aa1.91□□□□□ -2.1
HDAC2-208ENST00000520746 COMMD3Q9UBI1 195 aa1.91□□□□□ -2.1
HDAC2-208ENST00000520746 ANXA10Q9UJ72 324 aa1.91□□□□□ -2.1
HDAC2-208ENST00000520746 PRNDQ9UKY0 176 aa1.91□□□□□ -2.1
HDAC2-208ENST00000520746 CHTOPQ9Y3Y2 248 aaKnown RBP1.91□□□□□ -2.1
HDAC2-208ENST00000520746 PUS1Q9Y606 427 aaKnown RBP eCLIP1.91□□□□□ -2.1
HDAC2-208ENST00000520746 TRDV1A0A1B0GX56 115 aa1.9□□□□□ -2.11
HDAC2-208ENST00000520746 MEIS3P1A6NDR6 274 aa1.9□□□□□ -2.11
HDAC2-208ENST00000520746 TMEM235A6NFC5 223 aa1.9□□□□□ -2.11
HDAC2-208ENST00000520746 NAP1L6A6NFF2 107 aa1.9□□□□□ -2.11
HDAC2-208ENST00000520746 IFITM5A6NNB3 132 aa1.9□□□□□ -2.11
HDAC2-208ENST00000520746 A8MUU9 505 aa1.9□□□□□ -2.11
HDAC2-208ENST00000520746 KRBOX1C9JBD0 128 aa1.9□□□□□ -2.11
HDAC2-208ENST00000520746 INMT-MINDY4F8WBC2 141 aa1.9□□□□□ -2.11
HDAC2-208ENST00000520746 K7EIM0 57 aa1.9□□□□□ -2.11
HDAC2-208ENST00000520746 PPYP01298 95 aa1.9□□□□□ -2.11
HDAC2-208ENST00000520746 IFNA7P01567 189 aa1.9□□□□□ -2.11
HDAC2-208ENST00000520746 PTHLHP12272 177 aa1.9□□□□□ -2.11
HDAC2-208ENST00000520746 NUP62P37198 522 aaPredicted RBP1.9□□□□□ -2.11
HDAC2-208ENST00000520746 OR10A3P58181 314 aa1.9□□□□□ -2.11
HDAC2-208ENST00000520746 TSPAN5P62079 268 aa1.9□□□□□ -2.11
HDAC2-208ENST00000520746 RPS25P62851 125 aaKnown RBP1.9□□□□□ -2.11
HDAC2-208ENST00000520746 SPINK9Q5DT21 86 aa1.9□□□□□ -2.11
HDAC2-208ENST00000520746 RNASE13Q5GAN3 156 aaKnown RBP1.9□□□□□ -2.11
HDAC2-208ENST00000520746 TOMM5Q8N4H5 51 aa1.9□□□□□ -2.11
HDAC2-208ENST00000520746 SLC35G3Q8N808 338 aa1.9□□□□□ -2.11
HDAC2-208ENST00000520746 OR1P1Q8NH06 330 aa1.9□□□□□ -2.11
HDAC2-208ENST00000520746 LGALS14Q8TCE9 139 aa1.9□□□□□ -2.11
HDAC2-208ENST00000520746 ZNF431Q8TF32 576 aaPredicted RBP1.9□□□□□ -2.11
HDAC2-208ENST00000520746 HYLS1Q96M11 299 aa1.9□□□□□ -2.11
HDAC2-208ENST00000520746 C18orf15Q96N68 181 aa1.9□□□□□ -2.11
HDAC2-208ENST00000520746 PBDC1Q9BVG4 233 aa1.9□□□□□ -2.11
HDAC2-208ENST00000520746 SLIRPQ9GZT3 109 aaKnown RBP1.9□□□□□ -2.11
HDAC2-208ENST00000520746 NDUFA4L2Q9NRX3 87 aa1.9□□□□□ -2.11
HDAC2-208ENST00000520746 TXNL4BQ9NX01 149 aaKnown RBP1.9□□□□□ -2.11
HDAC2-208ENST00000520746 NDUFB11Q9NX14 153 aa1.9□□□□□ -2.11
HDAC2-208ENST00000520746 ZNF586Q9NXT0 402 aa1.9□□□□□ -2.11
HDAC2-208ENST00000520746 HERC2O95714 4834 aa1.9□□□□□ -2.11
HDAC2-208ENST00000520746 TRAV30A0A087WSZ9 112 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 TRAV2A0A0B4J234 112 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 A0A0J9YY99 117 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 A6NDN8 102 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 H3BMM0 161 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 TEX46H3BTG2 121 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 I3L2K1 104 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 MFNGO00587 321 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 LYRM1O43325 122 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 HPGDSO60760 199 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 PGLYRP1O75594 196 aaPredicted RBP1.89□□□□□ -2.11
HDAC2-208ENST00000520746 ATG12O94817 140 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 PMP2P02689 132 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 ATP5G1P05496 136 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 RD3LP0DJH9 198 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 HLA-DMAP28067 261 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 GNRHRP30968 328 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 FUSP35637 526 aaKnown RBP eCLIP1.89□□□□□ -2.11
HDAC2-208ENST00000520746 ETV6P41212 452 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 ATP5G3P48201 142 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 TAS2R46P59540 309 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 HSPE1P61604 102 aaKnown RBP1.89□□□□□ -2.11
HDAC2-208ENST00000520746 RHOBP62745 196 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 MRPS10P82664 201 aaKnown RBP1.89□□□□□ -2.11
HDAC2-208ENST00000520746 PSG9Q00887 426 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 FABP5Q01469 135 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 USF2Q15853 346 aaPredicted RBP1.89□□□□□ -2.11
HDAC2-208ENST00000520746 TTC32Q5I0X7 151 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 Q5VSD8 79 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 FAM78BQ5VT40 261 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 TMEM91Q6ZNR0 172 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 ZNF818PQ6ZRF7 136 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 SSX7Q7RTT5 188 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 SNX29P2Q8IUI4 249 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 CBLN2Q8IUK8 224 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 OR4C16Q8NGL9 310 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 OR5H2Q8NGV7 314 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 SUN5Q8TC36 379 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 LRRC20Q8TCA0 184 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 GNPNAT1Q96EK6 184 aaPredicted RBP1.89□□□□□ -2.11
HDAC2-208ENST00000520746 S100A16Q96FQ6 103 aaKnown RBP1.89□□□□□ -2.11
HDAC2-208ENST00000520746 ACY3Q96HD9 319 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 LINC01587Q99440 93 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 LYSTQ99698 3801 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 VSIRQ9H7M9 311 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 RPRMQ9NS64 109 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 FKBP14Q9NWM8 211 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 MCUBQ9NWR8 336 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 COMMD9Q9P000 198 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 CBY1Q9Y3M2 126 aa1.89□□□□□ -2.11
HDAC2-208ENST00000520746 HSPB11Q9Y547 144 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms