RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 OR2K2Q8NGT1 345 aa7.8□□□□□ -1.16
MCF2-209ENST00000520602 RAB37Q96AX2 223 aa7.8□□□□□ -1.16
MCF2-209ENST00000520602 ST20Q9HBF5 79 aa7.8□□□□□ -1.16
MCF2-209ENST00000520602 AVPP01185 164 aa7.8□□□□□ -1.16
MCF2-209ENST00000520602 SMPXQ9UHP9 88 aa7.8□□□□□ -1.16
MCF2-209ENST00000520602 A0A087WWL8 130 aa7.8□□□□□ -1.16
MCF2-209ENST00000520602 DEFB136Q30KP8 78 aa7.8□□□□□ -1.16
MCF2-209ENST00000520602 MEGF9Q9H1U4 602 aa7.8□□□□□ -1.16
MCF2-209ENST00000520602 GNRH2O43555 120 aa7.79□□□□□ -1.16
MCF2-209ENST00000520602 GCSHP23434 173 aa7.79□□□□□ -1.16
MCF2-209ENST00000520602 MPV17L2Q567V2 206 aa7.79□□□□□ -1.16
MCF2-209ENST00000520602 NACAE9PAV3 2078 aa7.79□□□□□ -1.16
MCF2-209ENST00000520602 A0A087X0K7 114 aa7.79□□□□□ -1.16
MCF2-209ENST00000520602 TRBV6-1A0A0K0K1D8 114 aa7.79□□□□□ -1.16
MCF2-209ENST00000520602 ATP5LO75964 103 aa7.79□□□□□ -1.16
MCF2-209ENST00000520602 SRSF1Q07955 248 aaKnown RBP eCLIP7.79□□□□□ -1.16
MCF2-209ENST00000520602 SPINK13Q1W4C9 94 aa7.79□□□□□ -1.16
MCF2-209ENST00000520602 C10orf99Q6UWK7 81 aa7.79□□□□□ -1.16
MCF2-209ENST00000520602 SCGB1D4Q6XE38 83 aa7.79□□□□□ -1.16
MCF2-209ENST00000520602 KIR2DL4Q99706 377 aa7.79□□□□□ -1.16
MCF2-209ENST00000520602 NPIPB6E9PJ23 425 aa7.79□□□□□ -1.16
MCF2-209ENST00000520602 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.78□□□□□ -1.16
MCF2-209ENST00000520602 MRPS12O15235 138 aaKnown RBP7.78□□□□□ -1.16
MCF2-209ENST00000520602 KLHL30-AS1Q8NEE0 82 aa7.78□□□□□ -1.16
MCF2-209ENST00000520602 J3QLI3 93 aa7.78□□□□□ -1.16
MCF2-209ENST00000520602 IGF1P05019 195 aa7.78□□□□□ -1.16
MCF2-209ENST00000520602 VPREB3Q9UKI3 123 aa7.78□□□□□ -1.16
MCF2-209ENST00000520602 ZFHX4Q86UP3 3567 aa7.78□□□□□ -1.16
MCF2-209ENST00000520602 RBAKDNA6NC62 111 aa7.78□□□□□ -1.16
MCF2-209ENST00000520602 H3BUA1 57 aa7.78□□□□□ -1.16
MCF2-209ENST00000520602 LAGE3Q14657 143 aa7.78□□□□□ -1.16
MCF2-209ENST00000520602 RNF151Q2KHN1 245 aa7.78□□□□□ -1.16
MCF2-209ENST00000520602 ZNF747Q9BV97 191 aa7.78□□□□□ -1.16
MCF2-209ENST00000520602 TCTEX1D4Q5JR98 221 aa7.77□□□□□ -1.17
MCF2-209ENST00000520602 SAMD13Q5VXD3 122 aa7.77□□□□□ -1.17
MCF2-209ENST00000520602 RAX2Q96IS3 184 aa7.77□□□□□ -1.17
MCF2-209ENST00000520602 DPH3P1Q9H4G8 78 aa7.77□□□□□ -1.17
MCF2-209ENST00000520602 KLK9Q9UKQ9 250 aa7.77□□□□□ -1.17
MCF2-209ENST00000520602 DEFB131AP59861 70 aa7.77□□□□□ -1.17
MCF2-209ENST00000520602 LOXL1Q08397 574 aaPredicted RBP7.77□□□□□ -1.17
MCF2-209ENST00000520602 DEFB113Q30KQ7 82 aa7.77□□□□□ -1.17
MCF2-209ENST00000520602 IGHV3-73A0A0B4J1V6 119 aa7.77□□□□□ -1.17
MCF2-209ENST00000520602 GTSCR1Q86UQ5 136 aa7.77□□□□□ -1.17
MCF2-209ENST00000520602 COL12A1Q99715 3063 aa7.76□□□□□ -1.17
MCF2-209ENST00000520602 A6NDN8 102 aa7.76□□□□□ -1.17
MCF2-209ENST00000520602 C2orf70A6NJV1 201 aa7.76□□□□□ -1.17
MCF2-209ENST00000520602 LINC01587Q99440 93 aa7.76□□□□□ -1.17
MCF2-209ENST00000520602 MS4A6AQ9H2W1 248 aa7.76□□□□□ -1.17
MCF2-209ENST00000520602 PEMTQ9UBM1 199 aa7.76□□□□□ -1.17
MCF2-209ENST00000520602 IGKV3D-20A0A0C4DH25 116 aa7.76□□□□□ -1.17
MCF2-209ENST00000520602 DUSP14O95147 198 aaKnown RBP7.76□□□□□ -1.17
MCF2-209ENST00000520602 OR11H1Q8NG94 326 aa7.76□□□□□ -1.17
MCF2-209ENST00000520602 FASNP49327 2511 aaKnown RBP7.76□□□□□ -1.17
MCF2-209ENST00000520602 CLPSL1A2RUU4 121 aa7.76□□□□□ -1.17
MCF2-209ENST00000520602 HOXD3P31249 432 aaPredicted RBP7.76□□□□□ -1.17
MCF2-209ENST00000520602 LINC01559Q495D7 138 aa7.76□□□□□ -1.17
MCF2-209ENST00000520602 NEGR1Q7Z3B1 354 aa7.76□□□□□ -1.17
MCF2-209ENST00000520602 SRSF9Q13242 221 aaKnown RBP eCLIP7.75□□□□□ -1.17
MCF2-209ENST00000520602 HIST2H2BCQ6DN03 193 aa7.75□□□□□ -1.17
MCF2-209ENST00000520602 DGAT2L7PQ6IED9 249 aa7.75□□□□□ -1.17
MCF2-209ENST00000520602 ARL6IP6Q8N6S5 226 aa7.75□□□□□ -1.17
MCF2-209ENST00000520602 MRPL53Q96EL3 112 aaKnown RBP7.75□□□□□ -1.17
MCF2-209ENST00000520602 DPM2O94777 84 aa7.75□□□□□ -1.17
MCF2-209ENST00000520602 C9orf47Q6ZRZ4 202 aa7.75□□□□□ -1.17
MCF2-209ENST00000520602 ZNF843Q8N446 348 aa7.75□□□□□ -1.17
MCF2-209ENST00000520602 TEX29Q8N6K0 151 aa7.75□□□□□ -1.17
MCF2-209ENST00000520602 PIFOQ8TCI5 191 aa7.75□□□□□ -1.17
MCF2-209ENST00000520602 C20orf173Q96LM9 149 aa7.75□□□□□ -1.17
MCF2-209ENST00000520602 CSTL1Q9H114 145 aa7.75□□□□□ -1.17
MCF2-209ENST00000520602 CTRLP40313 264 aa7.75□□□□□ -1.17
MCF2-209ENST00000520602 Q6ZQT7 251 aa7.75□□□□□ -1.17
MCF2-209ENST00000520602 TRAV8-2A0A0B4J237 113 aa7.74□□□□□ -1.17
MCF2-209ENST00000520602 KNCNA6PVL3 124 aa7.74□□□□□ -1.17
MCF2-209ENST00000520602 PPP1R17O96001 155 aa7.74□□□□□ -1.17
MCF2-209ENST00000520602 IGKCP01834 107 aa7.74□□□□□ -1.17
MCF2-209ENST00000520602 KRTAP10-9P60411 292 aa7.74□□□□□ -1.17
MCF2-209ENST00000520602 KIR3DS1Q14943 382 aa7.74□□□□□ -1.17
MCF2-209ENST00000520602 ORMDL2Q53FV1 153 aa7.74□□□□□ -1.17
MCF2-209ENST00000520602 ZC2HC1BQ5TFG8 222 aa7.74□□□□□ -1.17
MCF2-209ENST00000520602 HIST2H2BDQ6DRA6 164 aa7.74□□□□□ -1.17
MCF2-209ENST00000520602 Q6ZVH6 145 aa7.74□□□□□ -1.17
MCF2-209ENST00000520602 DKK2Q9UBU2 259 aa7.74□□□□□ -1.17
MCF2-209ENST00000520602 JMJD1CQ15652 2540 aa7.74□□□□□ -1.17
MCF2-209ENST00000520602 OR11H12B2RN74 326 aa7.74□□□□□ -1.17
MCF2-209ENST00000520602 SLURP1P55000 103 aa7.74□□□□□ -1.17
MCF2-209ENST00000520602 TMEM170BQ5T4T1 132 aa7.74□□□□□ -1.17
MCF2-209ENST00000520602 LURAP1LQ8IV03 231 aa7.74□□□□□ -1.17
MCF2-209ENST00000520602 OR11H2Q8NH07 326 aa7.74□□□□□ -1.17
MCF2-209ENST00000520602 TP73-AS1Q9UF72 201 aa7.74□□□□□ -1.17
MCF2-209ENST00000520602 IGHV4OR15-8A0A075B7B6 117 aa7.73□□□□□ -1.17
MCF2-209ENST00000520602 A0A087WW49 117 aa7.73□□□□□ -1.17
MCF2-209ENST00000520602 ELANEP08246 267 aa7.73□□□□□ -1.17
MCF2-209ENST00000520602 SUMO2P61956 95 aaKnown RBP7.73□□□□□ -1.17
MCF2-209ENST00000520602 Q8N8P6 123 aa7.73□□□□□ -1.17
MCF2-209ENST00000520602 BBC3Q96PG8 261 aaPredicted RBP7.73□□□□□ -1.17
MCF2-209ENST00000520602 HIST1H4GQ99525 98 aa7.73□□□□□ -1.17
MCF2-209ENST00000520602 NAA38Q9BRA0 125 aaKnown RBP7.73□□□□□ -1.17
MCF2-209ENST00000520602 FN1P02751 2386 aaKnown RBP7.73□□□□□ -1.17
MCF2-209ENST00000520602 HERVK_113P61574 105 aa7.73□□□□□ -1.17
MCF2-209ENST00000520602 EMP1P54849 157 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms