RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 CD7P09564 240 aa7.93□□□□□ -1.14
PDGFRB-207ENST00000520579 PMVKQ15126 192 aa7.93□□□□□ -1.14
PDGFRB-207ENST00000520579 ATP6V0E2Q8NHE4 81 aa7.93□□□□□ -1.14
PDGFRB-207ENST00000520579 ZZEF1O43149 2961 aa7.93□□□□□ -1.14
PDGFRB-207ENST00000520579 SPG11Q96JI7 2443 aa7.93□□□□□ -1.14
PDGFRB-207ENST00000520579 HERVK_113P61574 105 aa7.93□□□□□ -1.14
PDGFRB-207ENST00000520579 NACAE9PAV3 2078 aa7.93□□□□□ -1.14
PDGFRB-207ENST00000520579 DPM2O94777 84 aa7.93□□□□□ -1.14
PDGFRB-207ENST00000520579 AAMDCQ9H7C9 122 aa7.93□□□□□ -1.14
PDGFRB-207ENST00000520579 OTORQ9NRC9 128 aa7.93□□□□□ -1.14
PDGFRB-207ENST00000520579 CTSZQ9UBR2 303 aa7.93□□□□□ -1.14
PDGFRB-207ENST00000520579 PRO0461Q9UI25 63 aa7.93□□□□□ -1.14
PDGFRB-207ENST00000520579 CFAP126Q5VTH2 177 aa7.92□□□□□ -1.14
PDGFRB-207ENST00000520579 LYPD2Q6UXB3 125 aa7.92□□□□□ -1.14
PDGFRB-207ENST00000520579 KLHL30-AS1Q8NEE0 82 aa7.92□□□□□ -1.14
PDGFRB-207ENST00000520579 IGHV3-64A0A075B6Q5 118 aa7.92□□□□□ -1.14
PDGFRB-207ENST00000520579 C10orf142B7Z368 130 aa7.92□□□□□ -1.14
PDGFRB-207ENST00000520579 LYNX1G3V0Z9 82 aa7.92□□□□□ -1.14
PDGFRB-207ENST00000520579 LYNX1P0DP58 116 aa7.92□□□□□ -1.14
PDGFRB-207ENST00000520579 EGR2P11161 476 aaPredicted RBP7.92□□□□□ -1.14
PDGFRB-207ENST00000520579 Q6ZT83 130 aa7.92□□□□□ -1.14
PDGFRB-207ENST00000520579 MYOZ3Q8TDC0 251 aa7.92□□□□□ -1.14
PDGFRB-207ENST00000520579 SVEP1Q4LDE5 3571 aa7.92□□□□□ -1.14
PDGFRB-207ENST00000520579 ZNF785A8K8V0 405 aa7.92□□□□□ -1.14
PDGFRB-207ENST00000520579 SMCPP49901 116 aaPredicted RBP7.92□□□□□ -1.14
PDGFRB-207ENST00000520579 LINC01587Q99440 93 aa7.92□□□□□ -1.14
PDGFRB-207ENST00000520579 NCBP2LA6PVI3 153 aaKnown RBP7.91□□□□□ -1.14
PDGFRB-207ENST00000520579 GAFA1Q96PS6 74 aa7.91□□□□□ -1.14
PDGFRB-207ENST00000520579 SIRPDQ9H106 197 aa7.91□□□□□ -1.14
PDGFRB-207ENST00000520579 PRO3102Q9H379 93 aa7.91□□□□□ -1.14
PDGFRB-207ENST00000520579 TRPT1Q86TN4 253 aaKnown RBP7.91□□□□□ -1.14
PDGFRB-207ENST00000520579 BAALCQ8WXS3 180 aa7.91□□□□□ -1.14
PDGFRB-207ENST00000520579 IGLV2-11P01706 119 aa7.91□□□□□ -1.14
PDGFRB-207ENST00000520579 MYCNOSP40205 109 aa7.91□□□□□ -1.14
PDGFRB-207ENST00000520579 Q1RN00 199 aa7.91□□□□□ -1.14
PDGFRB-207ENST00000520579 FAM57AQ8TBR7 257 aa7.91□□□□□ -1.14
PDGFRB-207ENST00000520579 ZNF80P51504 273 aaPredicted RBP7.9□□□□□ -1.14
PDGFRB-207ENST00000520579 RNF182Q8N6D2 247 aa7.9□□□□□ -1.14
PDGFRB-207ENST00000520579 SCNM1Q9BWG6 230 aa7.9□□□□□ -1.14
PDGFRB-207ENST00000520579 FAM236DA0A1B0GTK5 79 aa7.9□□□□□ -1.14
PDGFRB-207ENST00000520579 RS1O15537 224 aa7.9□□□□□ -1.14
PDGFRB-207ENST00000520579 FAM236CP0DP71 79 aa7.9□□□□□ -1.14
PDGFRB-207ENST00000520579 FAM27E3Q08E93 113 aa7.9□□□□□ -1.14
PDGFRB-207ENST00000520579 WI2-2373I1.2A0A1W2PRP0 233 aa7.9□□□□□ -1.15
PDGFRB-207ENST00000520579 RBAKDNA6NC62 111 aa7.9□□□□□ -1.15
PDGFRB-207ENST00000520579 TRGV3P03979 118 aa7.9□□□□□ -1.15
PDGFRB-207ENST00000520579 THBDP07204 575 aa7.9□□□□□ -1.15
PDGFRB-207ENST00000520579 TMEM200BQ69YZ2 307 aa7.9□□□□□ -1.15
PDGFRB-207ENST00000520579 IL17RELQ6ZVW7 336 aa7.9□□□□□ -1.15
PDGFRB-207ENST00000520579 MGPP08493 103 aa7.89□□□□□ -1.15
PDGFRB-207ENST00000520579 NTN5Q8WTR8 489 aaPredicted RBP7.89□□□□□ -1.15
PDGFRB-207ENST00000520579 ASH1LQ9NR48 2969 aaKnown RBP7.89□□□□□ -1.15
PDGFRB-207ENST00000520579 M0R381 172 aa7.89□□□□□ -1.15
PDGFRB-207ENST00000520579 FSTL3O95633 263 aa7.89□□□□□ -1.15
PDGFRB-207ENST00000520579 CT83Q5H943 113 aa7.89□□□□□ -1.15
PDGFRB-207ENST00000520579 GFRA4Q9GZZ7 299 aa7.89□□□□□ -1.15
PDGFRB-207ENST00000520579 TRGV11A0A075B6L2 103 aa7.89□□□□□ -1.15
PDGFRB-207ENST00000520579 ZNF815PA8K554 130 aa7.89□□□□□ -1.15
PDGFRB-207ENST00000520579 DSCR8Q96T75 97 aa7.89□□□□□ -1.15
PDGFRB-207ENST00000520579 DUSP14O95147 198 aaKnown RBP7.88□□□□□ -1.15
PDGFRB-207ENST00000520579 ASIPP42127 132 aa7.88□□□□□ -1.15
PDGFRB-207ENST00000520579 PMS2CLQ68D20 193 aa7.88□□□□□ -1.15
PDGFRB-207ENST00000520579 TMEM219Q86XT9 240 aa7.88□□□□□ -1.15
PDGFRB-207ENST00000520579 IGHV1-46P01743 117 aa7.88□□□□□ -1.15
PDGFRB-207ENST00000520579 IGHV4-39P01824 125 aa7.88□□□□□ -1.15
PDGFRB-207ENST00000520579 TRBV19A0A075B6N1 114 aa7.88□□□□□ -1.15
PDGFRB-207ENST00000520579 IGKV3-15P01624 115 aa7.88□□□□□ -1.15
PDGFRB-207ENST00000520579 SPANXN1Q5VSR9 72 aa7.88□□□□□ -1.15
PDGFRB-207ENST00000520579 C22orf34Q6ZV56 151 aa7.88□□□□□ -1.15
PDGFRB-207ENST00000520579 TMEM167AQ8TBQ9 72 aa7.88□□□□□ -1.15
PDGFRB-207ENST00000520579 PHLDA1Q8WV24 401 aaPredicted RBP7.88□□□□□ -1.15
PDGFRB-207ENST00000520579 SLC25A16P16260 332 aa7.87□□□□□ -1.15
PDGFRB-207ENST00000520579 PRR30Q53SZ7 412 aaPredicted RBP7.87□□□□□ -1.15
PDGFRB-207ENST00000520579 HHLA3Q9XRX5 114 aa7.87□□□□□ -1.15
PDGFRB-207ENST00000520579 CEP192Q8TEP8 1941 aa7.87□□□□□ -1.15
PDGFRB-207ENST00000520579 LRBAP50851 2863 aa7.87□□□□□ -1.15
PDGFRB-207ENST00000520579 NDUFB3O43676 98 aa7.87□□□□□ -1.15
PDGFRB-207ENST00000520579 ZNF493Q6ZR52 646 aa7.87□□□□□ -1.15
PDGFRB-207ENST00000520579 RNF152Q8N8N0 203 aa7.87□□□□□ -1.15
PDGFRB-207ENST00000520579 RETNQ9HD89 108 aa7.87□□□□□ -1.15
PDGFRB-207ENST00000520579 TECTAO75443 2155 aa7.87□□□□□ -1.15
PDGFRB-207ENST00000520579 CD3EP07766 207 aa7.87□□□□□ -1.15
PDGFRB-207ENST00000520579 DEFB1P60022 68 aa7.87□□□□□ -1.15
PDGFRB-207ENST00000520579 WFDC11Q8NEX6 87 aa7.87□□□□□ -1.15
PDGFRB-207ENST00000520579 PLEKHB2Q96CS7 222 aa7.87□□□□□ -1.15
PDGFRB-207ENST00000520579 NXT2Q9NPJ8 142 aaKnown RBP7.87□□□□□ -1.15
PDGFRB-207ENST00000520579 hADV29S1A0JD25 119 aa7.86□□□□□ -1.15
PDGFRB-207ENST00000520579 CGB3P0DN86 165 aa7.86□□□□□ -1.15
PDGFRB-207ENST00000520579 CGB7P0DN87 165 aa7.86□□□□□ -1.15
PDGFRB-207ENST00000520579 NPC2P61916 151 aa7.86□□□□□ -1.15
PDGFRB-207ENST00000520579 C3orf22Q8N5N4 141 aa7.86□□□□□ -1.15
PDGFRB-207ENST00000520579 IGKV1-17P01599 117 aa7.86□□□□□ -1.15
PDGFRB-207ENST00000520579 TRACP01848 142 aa7.86□□□□□ -1.15
PDGFRB-207ENST00000520579 SCGB3A1Q96QR1 104 aa7.86□□□□□ -1.15
PDGFRB-207ENST00000520579 JPT2Q9H910 190 aa7.86□□□□□ -1.15
PDGFRB-207ENST00000520579 MDFICQ9P1T7 246 aa7.86□□□□□ -1.15
PDGFRB-207ENST00000520579 PRAC2D3DTV9 90 aa7.86□□□□□ -1.15
PDGFRB-207ENST00000520579 NTN3O00634 580 aaPredicted RBP7.86□□□□□ -1.15
PDGFRB-207ENST00000520579 SLC25A20O43772 301 aa7.86□□□□□ -1.15
PDGFRB-207ENST00000520579 THAP8Q8NA92 274 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms