RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 A0A1B0GW64 132 aa0.43□□□□□ -2.34
SKP1-207ENST00000520417 A0A1B0GX51 115 aa0.43□□□□□ -2.34
SKP1-207ENST00000520417 A6NN06 94 aa0.43□□□□□ -2.34
SKP1-207ENST00000520417 FXYD1O00168 92 aa0.43□□□□□ -2.34
SKP1-207ENST00000520417 RBP4P02753 201 aa0.43□□□□□ -2.34
SKP1-207ENST00000520417 SCTP09683 121 aa0.43□□□□□ -2.34
SKP1-207ENST00000520417 TMEM91Q6ZNR0 172 aa0.43□□□□□ -2.34
SKP1-207ENST00000520417 OR4S1Q8NGB4 309 aa0.43□□□□□ -2.34
SKP1-207ENST00000520417 LZICQ8WZA0 190 aa0.43□□□□□ -2.34
SKP1-207ENST00000520417 DMAC1Q96GE9 116 aa0.43□□□□□ -2.34
SKP1-207ENST00000520417 BANF2Q9H503 90 aa0.43□□□□□ -2.34
SKP1-207ENST00000520417 MRPL35Q9NZE8 188 aaKnown RBP0.43□□□□□ -2.34
SKP1-207ENST00000520417 METTL1Q9UBP6 276 aaKnown RBP0.43□□□□□ -2.34
SKP1-207ENST00000520417 JPT1Q9UK76 154 aa0.43□□□□□ -2.34
SKP1-207ENST00000520417 OVOS2A0A0G2JMS6 1433 aa0.43□□□□□ -2.34
SKP1-207ENST00000520417 FAM135BQ49AJ0 1406 aa0.43□□□□□ -2.34
SKP1-207ENST00000520417 FRMPD1Q5SYB0 1578 aa0.43□□□□□ -2.34
SKP1-207ENST00000520417 MED23Q9ULK4 1368 aa0.43□□□□□ -2.34
SKP1-207ENST00000520417 MUC5ACP98088 5654 aa0.42□□□□□ -2.34
SKP1-207ENST00000520417 A0A0D9SG42 100 aa0.42□□□□□ -2.34
SKP1-207ENST00000520417 K7EIL1 84 aa0.42□□□□□ -2.34
SKP1-207ENST00000520417 OR2H2O95918 312 aa0.42□□□□□ -2.34
SKP1-207ENST00000520417 APOC1P02654 83 aa0.42□□□□□ -2.34
SKP1-207ENST00000520417 TFF1P04155 84 aa0.42□□□□□ -2.34
SKP1-207ENST00000520417 HLA-DRB4P13762 266 aa0.42□□□□□ -2.34
SKP1-207ENST00000520417 AKR1D1P51857 326 aa0.42□□□□□ -2.34
SKP1-207ENST00000520417 SPINK7P58062 85 aa0.42□□□□□ -2.34
SKP1-207ENST00000520417 FXYD3Q14802 87 aa0.42□□□□□ -2.34
SKP1-207ENST00000520417 SPINK13Q1W4C9 94 aa0.42□□□□□ -2.34
SKP1-207ENST00000520417 ASB16-AS1Q495Z4 193 aa0.42□□□□□ -2.34
SKP1-207ENST00000520417 CLLU1Q5K131 121 aa0.42□□□□□ -2.34
SKP1-207ENST00000520417 GLYATL3Q5SZD4 288 aa0.42□□□□□ -2.34
SKP1-207ENST00000520417 SLC25A26Q70HW3 274 aa0.42□□□□□ -2.34
SKP1-207ENST00000520417 MAGOHBQ96A72 148 aaKnown RBP0.42□□□□□ -2.34
SKP1-207ENST00000520417 VPS25Q9BRG1 176 aa0.42□□□□□ -2.34
SKP1-207ENST00000520417 DNAJC15Q9Y5T4 150 aa0.42□□□□□ -2.34
SKP1-207ENST00000520417 HLA-DRB4X5D2U9 266 aa0.42□□□□□ -2.34
SKP1-207ENST00000520417 TRPM1Q7Z4N2 1603 aa0.42□□□□□ -2.34
SKP1-207ENST00000520417 SPAG17Q6Q759 2223 aa0.41□□□□□ -2.34
SKP1-207ENST00000520417 PIK3C2AO00443 1686 aa0.41□□□□□ -2.34
SKP1-207ENST00000520417 J3QR89 54 aa0.41□□□□□ -2.34
SKP1-207ENST00000520417 LY6G6CO95867 125 aa0.41□□□□□ -2.34
SKP1-207ENST00000520417 IGF2P01344 180 aa0.41□□□□□ -2.34
SKP1-207ENST00000520417 CD3DP04234 171 aa0.41□□□□□ -2.34
SKP1-207ENST00000520417 SCGB1A1P11684 91 aa0.41□□□□□ -2.34
SKP1-207ENST00000520417 ADCYAP1P18509 176 aa0.41□□□□□ -2.34
SKP1-207ENST00000520417 CKS1BP61024 79 aa0.41□□□□□ -2.34
SKP1-207ENST00000520417 NCS1P62166 190 aa0.41□□□□□ -2.34
SKP1-207ENST00000520417 PLGLB1Q02325 96 aa0.41□□□□□ -2.34
SKP1-207ENST00000520417 SNX29P2Q8IUI4 249 aa0.41□□□□□ -2.34
SKP1-207ENST00000520417 MMGT1Q8N4V1 131 aa0.41□□□□□ -2.34
SKP1-207ENST00000520417 SLC35B3Q9H1N7 401 aa0.41□□□□□ -2.34
SKP1-207ENST00000520417 C10orf95Q9H7T3 257 aa0.41□□□□□ -2.34
SKP1-207ENST00000520417 ANKRD31Q8N7Z5 1873 aa0.41□□□□□ -2.34
SKP1-207ENST00000520417 TRPM7Q96QT4 1865 aa0.41□□□□□ -2.34
SKP1-207ENST00000520417 ANKRD30AQ9BXX3 1397 aa0.41□□□□□ -2.34
SKP1-207ENST00000520417 PHRF1Q9P1Y6 1649 aaKnown RBP0.41□□□□□ -2.34
SKP1-207ENST00000520417 TCOF1Q13428 1488 aaKnown RBP0.41□□□□□ -2.34
SKP1-207ENST00000520417 ADGBQ8N7X0 1667 aa0.4□□□□□ -2.34
SKP1-207ENST00000520417 USP24Q9UPU5 2620 aa0.4□□□□□ -2.34
SKP1-207ENST00000520417 MEGF8Q7Z7M0 2845 aa0.4□□□□□ -2.35
SKP1-207ENST00000520417 FER1L6Q2WGJ9 1857 aa0.4□□□□□ -2.35
SKP1-207ENST00000520417 SYNE2Q8WXH0 6885 aaKnown RBP0.4□□□□□ -2.35
SKP1-207ENST00000520417 M0R2Z0 102 aa0.4□□□□□ -2.35
SKP1-207ENST00000520417 HIST1H1AQ02539 215 aaPredicted RBP0.4□□□□□ -2.35
SKP1-207ENST00000520417 Q5XG85 94 aa0.4□□□□□ -2.35
SKP1-207ENST00000520417 C10orf99Q6UWK7 81 aa0.4□□□□□ -2.35
SKP1-207ENST00000520417 C5orf56Q8N8D9 126 aa0.4□□□□□ -2.35
SKP1-207ENST00000520417 NOP16Q9Y3C1 178 aaKnown RBP0.4□□□□□ -2.35
SKP1-207ENST00000520417 MYH1P12882 1939 aa0.39□□□□□ -2.35
SKP1-207ENST00000520417 ATG2AQ2TAZ0 1938 aa0.39□□□□□ -2.35
SKP1-207ENST00000520417 TRBV10-1A0A0K0K1A3 114 aa0.39□□□□□ -2.35
SKP1-207ENST00000520417 NBDYA0A0U1RRE5 68 aa0.39□□□□□ -2.35
SKP1-207ENST00000520417 PHGR1C9JFL3 82 aa0.39□□□□□ -2.35
SKP1-207ENST00000520417 YPEL1O60688 119 aa0.39□□□□□ -2.35
SKP1-207ENST00000520417 ATP11AUNQ6ZP68 121 aa0.39□□□□□ -2.35
SKP1-207ENST00000520417 ATP6V0E2Q8NHE4 81 aa0.39□□□□□ -2.35
SKP1-207ENST00000520417 DYNLRB2Q8TF09 96 aa0.39□□□□□ -2.35
SKP1-207ENST00000520417 PPP1R1CQ8WVI7 109 aa0.39□□□□□ -2.35
SKP1-207ENST00000520417 PPDPFLQ8WWR9 84 aa0.39□□□□□ -2.35
SKP1-207ENST00000520417 MAFIPQ8WZ33 124 aa0.39□□□□□ -2.35
SKP1-207ENST00000520417 TMEM141Q96I45 108 aa0.39□□□□□ -2.35
SKP1-207ENST00000520417 SMIM3Q9BZL3 60 aa0.39□□□□□ -2.35
SKP1-207ENST00000520417 COA4Q9NYJ1 87 aa0.39□□□□□ -2.35
SKP1-207ENST00000520417 TAS2R8Q9NYW2 309 aa0.39□□□□□ -2.35
SKP1-207ENST00000520417 GSKIPQ9P0R6 139 aa0.39□□□□□ -2.35
SKP1-207ENST00000520417 ANK1P16157 1881 aa0.39□□□□□ -2.35
SKP1-207ENST00000520417 K7ERU9 68 aa0.38□□□□□ -2.35
SKP1-207ENST00000520417 ARPC5O15511 151 aa0.38□□□□□ -2.35
SKP1-207ENST00000520417 SLC25A6P12236 298 aa0.38□□□□□ -2.35
SKP1-207ENST00000520417 TMEM14BQ9NUH8 114 aa0.38□□□□□ -2.35
SKP1-207ENST00000520417 FSIP2Q5CZC0 6907 aa0.38□□□□□ -2.35
SKP1-207ENST00000520417 HELZP42694 1942 aaKnown RBP0.38□□□□□ -2.35
SKP1-207ENST00000520417 LOC285556D6RIA3 1793 aa0.37□□□□□ -2.35
SKP1-207ENST00000520417 TEX49A0A1B0GTD5 131 aa0.37□□□□□ -2.35
SKP1-207ENST00000520417 A6NIN4 97 aa0.37□□□□□ -2.35
SKP1-207ENST00000520417 ZNF670-ZNF695F2Z2N8 137 aa0.37□□□□□ -2.35
SKP1-207ENST00000520417 IGLC6P0CF74 106 aa0.37□□□□□ -2.35
SKP1-207ENST00000520417 KLKP1Q107X0 134 aa0.37□□□□□ -2.35
SKP1-207ENST00000520417 KRTAP21-1Q3LI58 79 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 741.3 ms