RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 MBP02144 154 aa11.06□□□□□ -0.64
IGHV3-42-201ENST00000520410 GCHFRP30047 84 aa11.06□□□□□ -0.64
IGHV3-42-201ENST00000520410 PPT1P50897 306 aa11.06□□□□□ -0.64
IGHV3-42-201ENST00000520410 ERVFC1-1P60608 527 aa11.06□□□□□ -0.64
IGHV3-42-201ENST00000520410 PRNTQ86SH4 94 aa11.06□□□□□ -0.64
IGHV3-42-201ENST00000520410 C5orf17Q8NAS9 161 aa11.06□□□□□ -0.64
IGHV3-42-201ENST00000520410 ACTR3CQ9C0K3 210 aaPredicted RBP11.06□□□□□ -0.64
IGHV3-42-201ENST00000520410 SH3BGRL3Q9H299 93 aa11.06□□□□□ -0.64
IGHV3-42-201ENST00000520410 SERTM2A0A1B0GWG4 89 aa11.05□□□□□ -0.64
IGHV3-42-201ENST00000520410 STAG3L2P0CL84 134 aa11.05□□□□□ -0.64
IGHV3-42-201ENST00000520410 STAG3L3P0CL85 134 aa11.05□□□□□ -0.64
IGHV3-42-201ENST00000520410 RASL10AQ92737 203 aa11.05□□□□□ -0.64
IGHV3-42-201ENST00000520410 AQP10Q96PS8 301 aa11.05□□□□□ -0.64
IGHV3-42-201ENST00000520410 PSMG3Q9BT73 122 aaPredicted RBP11.05□□□□□ -0.64
IGHV3-42-201ENST00000520410 PKD1P98161 4303 aa11.04□□□□□ -0.64
IGHV3-42-201ENST00000520410 BORCS7-ASMTA0A0B4J1R7 106 aa11.04□□□□□ -0.64
IGHV3-42-201ENST00000520410 LOC100131303A0A0U1RQF7 123 aa11.04□□□□□ -0.64
IGHV3-42-201ENST00000520410 CXorf1O96002 111 aa11.04□□□□□ -0.64
IGHV3-42-201ENST00000520410 GCGP01275 180 aa11.04□□□□□ -0.64
IGHV3-42-201ENST00000520410 TCRAP04437 139 aa11.04□□□□□ -0.64
IGHV3-42-201ENST00000520410 EVI2AP22794 236 aa11.04□□□□□ -0.64
IGHV3-42-201ENST00000520410 KRTAP10-2P60368 255 aa11.04□□□□□ -0.64
IGHV3-42-201ENST00000520410 SUMO1P63165 101 aaKnown RBP11.04□□□□□ -0.64
IGHV3-42-201ENST00000520410 TDRG1Q3Y452 100 aa11.04□□□□□ -0.64
IGHV3-42-201ENST00000520410 WFDC10BQ8IUB3 73 aa11.04□□□□□ -0.64
IGHV3-42-201ENST00000520410 OR2G3Q8NGZ4 309 aa11.04□□□□□ -0.64
IGHV3-42-201ENST00000520410 TVP23CQ96ET8 276 aa11.04□□□□□ -0.64
IGHV3-42-201ENST00000520410 TMEM167BQ9NRX6 74 aa11.04□□□□□ -0.64
IGHV3-42-201ENST00000520410 PSG8Q9UQ74 426 aa11.04□□□□□ -0.64
IGHV3-42-201ENST00000520410 TNFRSF18Q9Y5U5 241 aa11.04□□□□□ -0.64
IGHV3-42-201ENST00000520410 PKHD1P08F94 4074 aa11.04□□□□□ -0.64
IGHV3-42-201ENST00000520410 IGHV3-73A0A0B4J1V6 119 aa11.03□□□□□ -0.64
IGHV3-42-201ENST00000520410 FBLL1A6NHQ2 334 aaKnown RBP11.03□□□□□ -0.64
IGHV3-42-201ENST00000520410 CDK2AP2O75956 126 aa11.03□□□□□ -0.64
IGHV3-42-201ENST00000520410 IFNA7P01567 189 aa11.03□□□□□ -0.64
IGHV3-42-201ENST00000520410 BTF3P20290 206 aaKnown RBP11.03□□□□□ -0.64
IGHV3-42-201ENST00000520410 NFE4Q86UQ8 179 aa11.03□□□□□ -0.64
IGHV3-42-201ENST00000520410 ARL6IP6Q8N6S5 226 aa11.03□□□□□ -0.64
IGHV3-42-201ENST00000520410 TAAR5O14804 337 aa11.02□□□□□ -0.65
IGHV3-42-201ENST00000520410 GIPP09681 153 aaPredicted RBP11.02□□□□□ -0.65
IGHV3-42-201ENST00000520410 UBE2G2P60604 165 aa11.02□□□□□ -0.65
IGHV3-42-201ENST00000520410 SERF2P84101 59 aa11.02□□□□□ -0.65
IGHV3-42-201ENST00000520410 FLI1Q01543 452 aaPredicted RBP11.02□□□□□ -0.65
IGHV3-42-201ENST00000520410 ZNF876PQ49A33 203 aa11.02□□□□□ -0.65
IGHV3-42-201ENST00000520410 SMUG1Q53HV7 270 aa11.02□□□□□ -0.65
IGHV3-42-201ENST00000520410 CYB561D1Q8N8Q1 229 aa11.02□□□□□ -0.65
IGHV3-42-201ENST00000520410 TMEM75Q8N9X5 138 aa11.02□□□□□ -0.65
IGHV3-42-201ENST00000520410 DNAH11Q96DT5 4516 aa11.01□□□□□ -0.65
IGHV3-42-201ENST00000520410 DYNC1H1Q14204 4646 aaKnown RBP11.01□□□□□ -0.65
IGHV3-42-201ENST00000520410 FUSP35637 526 aaKnown RBP eCLIP11.01□□□□□ -0.65
IGHV3-42-201ENST00000520410 Q5BKY6 102 aa11.01□□□□□ -0.65
IGHV3-42-201ENST00000520410 RPL7L1Q6DKI1 246 aaKnown RBP11.01□□□□□ -0.65
IGHV3-42-201ENST00000520410 PRADC1Q9BSG0 188 aa11.01□□□□□ -0.65
IGHV3-42-201ENST00000520410 EPDR1Q9UM22 224 aa11.01□□□□□ -0.65
IGHV3-42-201ENST00000520410 GGTLC3B5MD39 225 aa11□□□□□ -0.65
IGHV3-42-201ENST00000520410 S100A4P26447 101 aaKnown RBP11□□□□□ -0.65
IGHV3-42-201ENST00000520410 ZNF80P51504 273 aaPredicted RBP11□□□□□ -0.65
IGHV3-42-201ENST00000520410 AKR1C8PQ5T2L2 129 aa11□□□□□ -0.65
IGHV3-42-201ENST00000520410 MSRB1Q9NZV6 116 aa11□□□□□ -0.65
IGHV3-42-201ENST00000520410 TNFSF18Q9UNG2 199 aa11□□□□□ -0.65
IGHV3-42-201ENST00000520410 MUC4Q99102 2169 aa11□□□□□ -0.65
IGHV3-42-201ENST00000520410 TRAV34A0A0B4J273 112 aa10.99□□□□□ -0.65
IGHV3-42-201ENST00000520410 PSCAO43653 123 aa10.99□□□□□ -0.65
IGHV3-42-201ENST00000520410 CRYGDP07320 174 aa10.99□□□□□ -0.65
IGHV3-42-201ENST00000520410 PFN1P07737 140 aaKnown RBP10.99□□□□□ -0.65
IGHV3-42-201ENST00000520410 DNAH10OSP0CZ25 163 aa10.99□□□□□ -0.65
IGHV3-42-201ENST00000520410 FGF8P55075 233 aaPredicted RBP10.99□□□□□ -0.65
IGHV3-42-201ENST00000520410 OR10J3Q5JRS4 329 aa10.99□□□□□ -0.65
IGHV3-42-201ENST00000520410 SH2D6Q7Z4S9 175 aa10.99□□□□□ -0.65
IGHV3-42-201ENST00000520410 OR2T35Q8NGX2 323 aa10.99□□□□□ -0.65
IGHV3-42-201ENST00000520410 KRTAP4-5Q9BYR2 181 aa10.99□□□□□ -0.65
IGHV3-42-201ENST00000520410 GATA1P15976 413 aaPredicted RBP10.98□□□□□ -0.65
IGHV3-42-201ENST00000520410 RHOHQ15669 191 aa10.98□□□□□ -0.65
IGHV3-42-201ENST00000520410 SAPCD1Q5SSQ6 148 aa10.98□□□□□ -0.65
IGHV3-42-201ENST00000520410 Q6ZRN7 208 aaPredicted RBP10.98□□□□□ -0.65
IGHV3-42-201ENST00000520410 C11orf21Q9P2W6 132 aa10.98□□□□□ -0.65
IGHV3-42-201ENST00000520410 PCLOQ9Y6V0 5065 aa10.98□□□□□ -0.65
IGHV3-42-201ENST00000520410 TRAV8-6A0A0B4J262 113 aa10.97□□□□□ -0.65
IGHV3-42-201ENST00000520410 CTXND1A0A1B0GTU2 59 aa10.97□□□□□ -0.65
IGHV3-42-201ENST00000520410 RNF222A6NCQ9 220 aa10.97□□□□□ -0.65
IGHV3-42-201ENST00000520410 LGALSLQ3ZCW2 172 aaPredicted RBP10.97□□□□□ -0.65
IGHV3-42-201ENST00000520410 C10orf126Q8N4M7 172 aa10.97□□□□□ -0.65
IGHV3-42-201ENST00000520410 SLC25A29Q8N8R3 303 aa10.97□□□□□ -0.65
IGHV3-42-201ENST00000520410 SCRT2Q9NQ03 307 aa10.97□□□□□ -0.65
IGHV3-42-201ENST00000520410 ARPC5O15511 151 aa10.96□□□□□ -0.65
IGHV3-42-201ENST00000520410 RS1O15537 224 aa10.96□□□□□ -0.65
IGHV3-42-201ENST00000520410 ZNF506Q5JVG8 444 aa10.96□□□□□ -0.65
IGHV3-42-201ENST00000520410 CFAP126Q5VTH2 177 aa10.96□□□□□ -0.65
IGHV3-42-201ENST00000520410 LINC00479Q96M42 142 aa10.96□□□□□ -0.65
IGHV3-42-201ENST00000520410 Q9HAA7 133 aa10.96□□□□□ -0.65
IGHV3-42-201ENST00000520410 ARL2-SNX15V9GYD0 113 aa10.96□□□□□ -0.65
IGHV3-42-201ENST00000520410 IGHV3-38A0A0C4DH36 116 aa10.95□□□□□ -0.66
IGHV3-42-201ENST00000520410 A0A1W2PRE2 83 aa10.95□□□□□ -0.66
IGHV3-42-201ENST00000520410 PGPEP1LA6NFU8 196 aa10.95□□□□□ -0.66
IGHV3-42-201ENST00000520410 PEX7O00628 323 aa10.95□□□□□ -0.66
IGHV3-42-201ENST00000520410 IGHV3-30P01768 117 aa10.95□□□□□ -0.66
IGHV3-42-201ENST00000520410 IGHV3-33P01772 117 aa10.95□□□□□ -0.66
IGHV3-42-201ENST00000520410 IGHV3-30-3P0DP02 117 aa10.95□□□□□ -0.66
IGHV3-42-201ENST00000520410 IGHV3-30-5P0DP03 117 aa10.95□□□□□ -0.66
IGHV3-42-201ENST00000520410 ASIPP42127 132 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms