RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 NCR2O95944 276 aa2.66□□□□□ -1.98
CSMD3-209ENST00000519485 LHBP01229 141 aa2.66□□□□□ -1.98
CSMD3-209ENST00000519485 RBP4P02753 201 aa2.66□□□□□ -1.98
CSMD3-209ENST00000519485 P0DMU3 169 aa2.66□□□□□ -1.98
CSMD3-209ENST00000519485 FAM231AP0DMU4 169 aa2.66□□□□□ -1.98
CSMD3-209ENST00000519485 FAM231CP0DMU5 169 aa2.66□□□□□ -1.98
CSMD3-209ENST00000519485 GLRXP35754 106 aa2.66□□□□□ -1.98
CSMD3-209ENST00000519485 UBE2D3P61077 147 aa2.66□□□□□ -1.98
CSMD3-209ENST00000519485 LYZP61626 148 aa2.66□□□□□ -1.98
CSMD3-209ENST00000519485 UBE2D2P62837 147 aa2.66□□□□□ -1.98
CSMD3-209ENST00000519485 RPL32P62910 135 aaKnown RBP2.66□□□□□ -1.98
CSMD3-209ENST00000519485 PAX8Q06710 450 aa2.66□□□□□ -1.98
CSMD3-209ENST00000519485 PMVKQ15126 192 aa2.66□□□□□ -1.98
CSMD3-209ENST00000519485 C17orf58Q2M2W7 97 aa2.66□□□□□ -1.98
CSMD3-209ENST00000519485 C5orf47Q569G3 176 aa2.66□□□□□ -1.98
CSMD3-209ENST00000519485 ADAMTSL4-AS1Q5T5F5 129 aa2.66□□□□□ -1.98
CSMD3-209ENST00000519485 TMEM78Q5T7P6 136 aa2.66□□□□□ -1.98
CSMD3-209ENST00000519485 GUSBP11Q6P575 273 aa2.66□□□□□ -1.98
CSMD3-209ENST00000519485 Q71RC1 249 aaPredicted RBP2.66□□□□□ -1.98
CSMD3-209ENST00000519485 LRRC75A-AS1Q8N1F1 130 aa2.66□□□□□ -1.98
CSMD3-209ENST00000519485 RLN3Q8WXF3 142 aa2.66□□□□□ -1.98
CSMD3-209ENST00000519485 ZC2HC1AQ96GY0 325 aa2.66□□□□□ -1.98
CSMD3-209ENST00000519485 TIMD4Q96H15 378 aa2.66□□□□□ -1.98
CSMD3-209ENST00000519485 TMEM141Q96I45 108 aa2.66□□□□□ -1.98
CSMD3-209ENST00000519485 TMEM101Q96IK0 257 aa2.66□□□□□ -1.98
CSMD3-209ENST00000519485 SCGB3A1Q96QR1 104 aa2.66□□□□□ -1.98
CSMD3-209ENST00000519485 NAA38Q9BRA0 125 aaKnown RBP2.66□□□□□ -1.98
CSMD3-209ENST00000519485 SLC50A1Q9BRV3 221 aa2.66□□□□□ -1.98
CSMD3-209ENST00000519485 MRPL20Q9BYC9 149 aaKnown RBP2.66□□□□□ -1.98
CSMD3-209ENST00000519485 AKIRIN1Q9H9L7 192 aaPredicted RBP2.66□□□□□ -1.98
CSMD3-209ENST00000519485 PRO1854Q9UHT4 67 aa2.66□□□□□ -1.98
CSMD3-209ENST00000519485 FZR1Q9UM11 496 aa2.66□□□□□ -1.98
CSMD3-209ENST00000519485 EP400Q96L91 3159 aa2.66□□□□□ -1.98
CSMD3-209ENST00000519485 EML6Q6ZMW3 1958 aa2.65□□□□□ -1.98
CSMD3-209ENST00000519485 GTF3C1Q12789 2109 aa2.65□□□□□ -1.98
CSMD3-209ENST00000519485 IGLV7-46A0A075B6I9 117 aa2.65□□□□□ -1.99
CSMD3-209ENST00000519485 A0A096LNJ9 63 aa2.65□□□□□ -1.99
CSMD3-209ENST00000519485 TRAV2A0A0B4J234 112 aa2.65□□□□□ -1.99
CSMD3-209ENST00000519485 ZNF815PA8K554 130 aa2.65□□□□□ -1.99
CSMD3-209ENST00000519485 H3BRN7 92 aa2.65□□□□□ -1.99
CSMD3-209ENST00000519485 H3BT86 120 aa2.65□□□□□ -1.99
CSMD3-209ENST00000519485 H3BVH4 76 aa2.65□□□□□ -1.99
CSMD3-209ENST00000519485 M0R381 172 aa2.65□□□□□ -1.99
CSMD3-209ENST00000519485 SLC25A20O43772 301 aa2.65□□□□□ -1.99
CSMD3-209ENST00000519485 SH2D1AO60880 128 aa2.65□□□□□ -1.99
CSMD3-209ENST00000519485 CNIH1O95406 144 aa2.65□□□□□ -1.99
CSMD3-209ENST00000519485 MT-ATP8P03928 68 aa2.65□□□□□ -1.99
CSMD3-209ENST00000519485 IGKV1-16P04430 117 aa2.65□□□□□ -1.99
CSMD3-209ENST00000519485 IGLC6P0CF74 106 aa2.65□□□□□ -1.99
CSMD3-209ENST00000519485 IGHV1-2P23083 117 aa2.65□□□□□ -1.99
CSMD3-209ENST00000519485 MAGEA5P43359 124 aa2.65□□□□□ -1.99
CSMD3-209ENST00000519485 UBE2D1P51668 147 aa2.65□□□□□ -1.99
CSMD3-209ENST00000519485 XGP55808 180 aa2.65□□□□□ -1.99
CSMD3-209ENST00000519485 DLX1P56177 255 aa2.65□□□□□ -1.99
CSMD3-209ENST00000519485 RPS28P62857 69 aaKnown RBP2.65□□□□□ -1.99
CSMD3-209ENST00000519485 HERV-K104P63124 156 aa2.65□□□□□ -1.99
CSMD3-209ENST00000519485 TNFAIP6P98066 277 aaPredicted RBP2.65□□□□□ -1.99
CSMD3-209ENST00000519485 WT1-ASQ06250 92 aa2.65□□□□□ -1.99
CSMD3-209ENST00000519485 FAM106AQ4KMX7 169 aa2.65□□□□□ -1.99
CSMD3-209ENST00000519485 MEIG1Q5JSS6 88 aa2.65□□□□□ -1.99
CSMD3-209ENST00000519485 TMEM170BQ5T4T1 132 aa2.65□□□□□ -1.99
CSMD3-209ENST00000519485 TEX36Q5VZQ5 186 aa2.65□□□□□ -1.99
CSMD3-209ENST00000519485 LINC00322Q6ZN03 302 aaPredicted RBP2.65□□□□□ -1.99
CSMD3-209ENST00000519485 ZNF826PQ6ZT77 177 aa2.65□□□□□ -1.99
CSMD3-209ENST00000519485 IL17RELQ6ZVW7 336 aa2.65□□□□□ -1.99
CSMD3-209ENST00000519485 C10orf126Q8N4M7 172 aa2.65□□□□□ -1.99
CSMD3-209ENST00000519485 ANKRD29Q8N6D5 301 aa2.65□□□□□ -1.99
CSMD3-209ENST00000519485 SAP25Q8TEE9 199 aa2.65□□□□□ -1.99
CSMD3-209ENST00000519485 MRPL53Q96EL3 112 aaKnown RBP2.65□□□□□ -1.99
CSMD3-209ENST00000519485 C18orf15Q96N68 181 aa2.65□□□□□ -1.99
CSMD3-209ENST00000519485 CITED1Q99966 193 aa2.65□□□□□ -1.99
CSMD3-209ENST00000519485 YAE1D1Q9NRH1 226 aa2.65□□□□□ -1.99
CSMD3-209ENST00000519485 MRPL35Q9NZE8 188 aaKnown RBP2.65□□□□□ -1.99
CSMD3-209ENST00000519485 SS18L2Q9UHA2 77 aa2.65□□□□□ -1.99
CSMD3-209ENST00000519485 ZNF256Q9Y2P7 627 aaPredicted RBP2.65□□□□□ -1.99
CSMD3-209ENST00000519485 LENEPQ9Y5L5 61 aa2.65□□□□□ -1.99
CSMD3-209ENST00000519485 PCDH15Q96QU1 1955 aa2.65□□□□□ -1.99
CSMD3-209ENST00000519485 HCFC1P51610 2035 aa2.64□□□□□ -1.99
CSMD3-209ENST00000519485 A0A0B4J2C4 111 aa2.64□□□□□ -1.99
CSMD3-209ENST00000519485 TRBV10-2A0A0K0K1G8 114 aa2.64□□□□□ -1.99
CSMD3-209ENST00000519485 A0A1B0GX51 115 aa2.64□□□□□ -1.99
CSMD3-209ENST00000519485 H3BMM0 161 aa2.64□□□□□ -1.99
CSMD3-209ENST00000519485 J3KT08 172 aa2.64□□□□□ -1.99
CSMD3-209ENST00000519485 K7ERJ3 54 aa2.64□□□□□ -1.99
CSMD3-209ENST00000519485 M0R2P5 195 aa2.64□□□□□ -1.99
CSMD3-209ENST00000519485 UQCRQO14949 82 aa2.64□□□□□ -1.99
CSMD3-209ENST00000519485 ENSAO43768 121 aaKnown RBP2.64□□□□□ -1.99
CSMD3-209ENST00000519485 NDUFA3O95167 84 aa2.64□□□□□ -1.99
CSMD3-209ENST00000519485 CECR9P0C854 216 aa2.64□□□□□ -1.99
CSMD3-209ENST00000519485 CD59P13987 128 aa2.64□□□□□ -1.99
CSMD3-209ENST00000519485 LGALS3P17931 250 aaKnown RBP2.64□□□□□ -1.99
CSMD3-209ENST00000519485 CXCL12P48061 93 aa2.64□□□□□ -1.99
CSMD3-209ENST00000519485 ALKBH6Q3KRA9 238 aa2.64□□□□□ -1.99
CSMD3-209ENST00000519485 FAM201AQ5SY85 155 aa2.64□□□□□ -1.99
CSMD3-209ENST00000519485 UTF1Q5T230 341 aa2.64□□□□□ -1.99
CSMD3-209ENST00000519485 SPANXN1Q5VSR9 72 aa2.64□□□□□ -1.99
CSMD3-209ENST00000519485 SIGLEC15Q6ZMC9 328 aa2.64□□□□□ -1.99
CSMD3-209ENST00000519485 Q6ZS52 159 aa2.64□□□□□ -1.99
CSMD3-209ENST00000519485 NDUFA11Q86Y39 141 aa2.64□□□□□ -1.99
CSMD3-209ENST00000519485 EXOC3-AS1Q8N2X6 119 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms