RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 LYRM9A8MSI8 78 aa4.24□□□□□ -1.73
PABPC1-207ENST00000518716 UPK2O00526 184 aa4.24□□□□□ -1.73
PABPC1-207ENST00000518716 VCYO14598 125 aa4.24□□□□□ -1.73
PABPC1-207ENST00000518716 NDUFC2O95298 119 aa4.24□□□□□ -1.73
PABPC1-207ENST00000518716 OR5AL1P0C617 328 aa4.24□□□□□ -1.73
PABPC1-207ENST00000518716 CT45A10P0DMU9 189 aa4.24□□□□□ -1.73
PABPC1-207ENST00000518716 RAB5AP20339 215 aa4.24□□□□□ -1.73
PABPC1-207ENST00000518716 PSMB9P28065 219 aa4.24□□□□□ -1.73
PABPC1-207ENST00000518716 OR10J1P30954 320 aa4.24□□□□□ -1.73
PABPC1-207ENST00000518716 TFPI2P48307 235 aa4.24□□□□□ -1.73
PABPC1-207ENST00000518716 AKR1C2P52895 323 aa4.24□□□□□ -1.73
PABPC1-207ENST00000518716 DEFB131AP59861 70 aa4.24□□□□□ -1.73
PABPC1-207ENST00000518716 S100A10P60903 97 aa4.24□□□□□ -1.73
PABPC1-207ENST00000518716 HIST1H1AQ02539 215 aaPredicted RBP4.24□□□□□ -1.73
PABPC1-207ENST00000518716 C4orf26Q17RF5 130 aa4.24□□□□□ -1.73
PABPC1-207ENST00000518716 TIMM50Q3ZCQ8 353 aa4.24□□□□□ -1.73
PABPC1-207ENST00000518716 TMEM91Q6ZNR0 172 aa4.24□□□□□ -1.73
PABPC1-207ENST00000518716 GOLT1AQ6ZVE7 132 aa4.24□□□□□ -1.73
PABPC1-207ENST00000518716 FER1L6-AS1Q8NA97 138 aa4.24□□□□□ -1.73
PABPC1-207ENST00000518716 PCNPQ8WW12 178 aaKnown RBP4.24□□□□□ -1.73
PABPC1-207ENST00000518716 PLEKHB2Q96CS7 222 aa4.24□□□□□ -1.73
PABPC1-207ENST00000518716 HSD17B10Q99714 261 aaKnown RBP4.24□□□□□ -1.73
PABPC1-207ENST00000518716 ZNF586Q9NXT0 402 aa4.24□□□□□ -1.73
PABPC1-207ENST00000518716 C21orf62Q9NYP8 219 aa4.24□□□□□ -1.73
PABPC1-207ENST00000518716 THYN1Q9P016 225 aa4.24□□□□□ -1.73
PABPC1-207ENST00000518716 OR2W1Q9Y3N9 320 aa4.24□□□□□ -1.73
PABPC1-207ENST00000518716 IGHV3-49A0A0A0MS15 119 aa4.23□□□□□ -1.73
PABPC1-207ENST00000518716 TRAV14DV4A0A0A6YYC5 116 aa4.23□□□□□ -1.73
PABPC1-207ENST00000518716 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.23□□□□□ -1.73
PABPC1-207ENST00000518716 GABARAPO95166 117 aa4.23□□□□□ -1.73
PABPC1-207ENST00000518716 NDUFB4O95168 129 aa4.23□□□□□ -1.73
PABPC1-207ENST00000518716 HRASP01112 189 aa4.23□□□□□ -1.73
PABPC1-207ENST00000518716 PMP2P02689 132 aa4.23□□□□□ -1.73
PABPC1-207ENST00000518716 APOHP02749 345 aaPredicted RBP4.23□□□□□ -1.73
PABPC1-207ENST00000518716 PGAM2P15259 253 aa4.23□□□□□ -1.73
PABPC1-207ENST00000518716 GNB3P16520 340 aa4.23□□□□□ -1.73
PABPC1-207ENST00000518716 RPL29P47914 159 aaKnown RBP4.23□□□□□ -1.73
PABPC1-207ENST00000518716 GABARAPL2P60520 117 aa4.23□□□□□ -1.73
PABPC1-207ENST00000518716 MEF2BQ02080 365 aaPredicted RBP4.23□□□□□ -1.73
PABPC1-207ENST00000518716 MSMO1Q15800 293 aa4.23□□□□□ -1.73
PABPC1-207ENST00000518716 GGNBP1Q5YKI7 109 aa4.23□□□□□ -1.73
PABPC1-207ENST00000518716 FAAP20Q6NZ36 180 aa4.23□□□□□ -1.73
PABPC1-207ENST00000518716 SFXN4Q6P4A7 337 aa4.23□□□□□ -1.73
PABPC1-207ENST00000518716 NEGR1Q7Z3B1 354 aa4.23□□□□□ -1.73
PABPC1-207ENST00000518716 GBGT1Q8N5D6 347 aa4.23□□□□□ -1.73
PABPC1-207ENST00000518716 SLC35G3Q8N808 338 aa4.23□□□□□ -1.73
PABPC1-207ENST00000518716 TMEM18Q96B42 140 aa4.23□□□□□ -1.73
PABPC1-207ENST00000518716 FAM3DQ96BQ1 224 aa4.23□□□□□ -1.73
PABPC1-207ENST00000518716 NDUFA4L2Q9NRX3 87 aa4.23□□□□□ -1.73
PABPC1-207ENST00000518716 VAX2Q9UIW0 290 aa4.23□□□□□ -1.73
PABPC1-207ENST00000518716 ANXA10Q9UJ72 324 aa4.23□□□□□ -1.73
PABPC1-207ENST00000518716 LSM2Q9Y333 95 aaKnown RBP4.23□□□□□ -1.73
PABPC1-207ENST00000518716 MRPS16Q9Y3D3 137 aaKnown RBP4.23□□□□□ -1.73
PABPC1-207ENST00000518716 F11RQ9Y624 299 aaKnown RBP4.23□□□□□ -1.73
PABPC1-207ENST00000518716 IGKV3-7A0A075B6H7 116 aa4.22□□□□□ -1.73
PABPC1-207ENST00000518716 IGHV3-21A0A0B4J1V1 117 aa4.22□□□□□ -1.73
PABPC1-207ENST00000518716 TMEM272A0A1B0GTI8 110 aa4.22□□□□□ -1.73
PABPC1-207ENST00000518716 TEX50A0A1B0GTY4 177 aa4.22□□□□□ -1.73
PABPC1-207ENST00000518716 FAM231BA6NCW3 169 aa4.22□□□□□ -1.73
PABPC1-207ENST00000518716 EPM2AB3EWF7 344 aa4.22□□□□□ -1.73
PABPC1-207ENST00000518716 I3L2K1 104 aa4.22□□□□□ -1.73
PABPC1-207ENST00000518716 K7EQG2 157 aa4.22□□□□□ -1.73
PABPC1-207ENST00000518716 TNFSF12O43508 249 aa4.22□□□□□ -1.73
PABPC1-207ENST00000518716 INAFM2P0DMQ5 153 aa4.22□□□□□ -1.73
PABPC1-207ENST00000518716 GZMBP10144 247 aa4.22□□□□□ -1.73
PABPC1-207ENST00000518716 NFYAP23511 347 aaPredicted RBP4.22□□□□□ -1.73
PABPC1-207ENST00000518716 NDUFA6P56556 154 aa4.22□□□□□ -1.73
PABPC1-207ENST00000518716 TMEM183BQ1AE95 376 aa4.22□□□□□ -1.73
PABPC1-207ENST00000518716 ZNF66Q6ZN08 573 aa4.22□□□□□ -1.73
PABPC1-207ENST00000518716 ZNF705AQ6ZN79 300 aaPredicted RBP4.22□□□□□ -1.73
PABPC1-207ENST00000518716 FOXI2Q6ZQN5 318 aa4.22□□□□□ -1.73
PABPC1-207ENST00000518716 HIST3H2BBQ8N257 126 aa4.22□□□□□ -1.73
PABPC1-207ENST00000518716 OR5AP2Q8NGF4 316 aa4.22□□□□□ -1.73
PABPC1-207ENST00000518716 RBKSQ9H477 322 aa4.22□□□□□ -1.73
PABPC1-207ENST00000518716 Q9H8V8 135 aa4.22□□□□□ -1.73
PABPC1-207ENST00000518716 TMEM14BQ9NUH8 114 aa4.22□□□□□ -1.73
PABPC1-207ENST00000518716 IGHV3OR16-13A0A075B7E8 117 aa4.21□□□□□ -1.74
PABPC1-207ENST00000518716 IGHV3-74A0A0B4J1X5 117 aa4.21□□□□□ -1.74
PABPC1-207ENST00000518716 TRAV5A0A0B4J249 113 aa4.21□□□□□ -1.74
PABPC1-207ENST00000518716 NBDYA0A0U1RRE5 68 aa4.21□□□□□ -1.74
PABPC1-207ENST00000518716 ZNF705FA8MVS1 300 aaPredicted RBP4.21□□□□□ -1.74
PABPC1-207ENST00000518716 C9JAW5 83 aa4.21□□□□□ -1.74
PABPC1-207ENST00000518716 MPC2O95563 127 aa4.21□□□□□ -1.74
PABPC1-207ENST00000518716 NCR2O95944 276 aa4.21□□□□□ -1.74
PABPC1-207ENST00000518716 PFN1P07737 140 aaKnown RBP4.21□□□□□ -1.74
PABPC1-207ENST00000518716 ZNF705DP0CH99 300 aaPredicted RBP4.21□□□□□ -1.74
PABPC1-207ENST00000518716 ZNF705BP0CI00 300 aaPredicted RBP4.21□□□□□ -1.74
PABPC1-207ENST00000518716 SNCAP37840 140 aa4.21□□□□□ -1.74
PABPC1-207ENST00000518716 GNG5P63218 68 aa4.21□□□□□ -1.74
PABPC1-207ENST00000518716 SRPXP78539 464 aa4.21□□□□□ -1.74
PABPC1-207ENST00000518716 ARL16Q0P5N6 197 aa4.21□□□□□ -1.74
PABPC1-207ENST00000518716 SPATA12Q7Z6I5 190 aa4.21□□□□□ -1.74
PABPC1-207ENST00000518716 C6orf223Q8N319 242 aa4.21□□□□□ -1.74
PABPC1-207ENST00000518716 C5orf17Q8NAS9 161 aa4.21□□□□□ -1.74
PABPC1-207ENST00000518716 TMEM229BQ8NBD8 167 aa4.21□□□□□ -1.74
PABPC1-207ENST00000518716 OR1B1Q8NGR6 318 aa4.21□□□□□ -1.74
PABPC1-207ENST00000518716 DCANP1Q8TF63 244 aa4.21□□□□□ -1.74
PABPC1-207ENST00000518716 KIR2DL4Q99706 377 aa4.21□□□□□ -1.74
PABPC1-207ENST00000518716 DERL1Q9BUN8 251 aa4.21□□□□□ -1.74
PABPC1-207ENST00000518716 EHFQ9NZC4 300 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms