RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 Q6ZS92 163 aa2□□□□□ -2.09
VPS13B-207ENST00000518569 Q6ZUT4 128 aa2□□□□□ -2.09
VPS13B-207ENST00000518569 SLC35E3Q7Z769 313 aa2□□□□□ -2.09
VPS13B-207ENST00000518569 LINC00311Q8N616 119 aa2□□□□□ -2.09
VPS13B-207ENST00000518569 DAND5Q8N907 189 aa2□□□□□ -2.09
VPS13B-207ENST00000518569 ATP6V0E2Q8NHE4 81 aa2□□□□□ -2.09
VPS13B-207ENST00000518569 OTOSQ8NHW6 89 aa2□□□□□ -2.09
VPS13B-207ENST00000518569 STAG3L4Q8TBR4 150 aa2□□□□□ -2.09
VPS13B-207ENST00000518569 DCANP1Q8TF63 244 aa2□□□□□ -2.09
VPS13B-207ENST00000518569 NAA38Q9BRA0 125 aaKnown RBP2□□□□□ -2.09
VPS13B-207ENST00000518569 LINC00467Q9BRT7 94 aa2□□□□□ -2.09
VPS13B-207ENST00000518569 SHANK2-AS3Q9BTD1 123 aa2□□□□□ -2.09
VPS13B-207ENST00000518569 SLC35B3Q9H1N7 401 aa2□□□□□ -2.09
VPS13B-207ENST00000518569 CA10Q9NS85 328 aa2□□□□□ -2.09
VPS13B-207ENST00000518569 NHP2Q9NX24 153 aaKnown RBP2□□□□□ -2.09
VPS13B-207ENST00000518569 UQCR10Q9UDW1 63 aa2□□□□□ -2.09
VPS13B-207ENST00000518569 PRRC2BQ5JSZ5 2229 aaKnown RBP2□□□□□ -2.09
VPS13B-207ENST00000518569 SSC5DA1L4H1 1573 aa2□□□□□ -2.09
VPS13B-207ENST00000518569 PLXNB2O15031 1838 aa2□□□□□ -2.09
VPS13B-207ENST00000518569 PHIPQ8WWQ0 1821 aa2□□□□□ -2.09
VPS13B-207ENST00000518569 PIKFYVEQ9Y2I7 2098 aa2□□□□□ -2.09
VPS13B-207ENST00000518569 A0A1B0GUL6 1792 aa2□□□□□ -2.09
VPS13B-207ENST00000518569 NBEAQ8NFP9 2946 aa2□□□□□ -2.09
VPS13B-207ENST00000518569 BAZ2AQ9UIF9 1905 aaKnown RBP1.99□□□□□ -2.09
VPS13B-207ENST00000518569 MYH2Q9UKX2 1941 aa1.99□□□□□ -2.09
VPS13B-207ENST00000518569 ZNF106Q9H2Y7 1883 aaKnown RBP1.99□□□□□ -2.09
VPS13B-207ENST00000518569 KIF26AQ9ULI4 1882 aaPredicted RBP1.99□□□□□ -2.09
VPS13B-207ENST00000518569 DOCK2Q92608 1830 aa1.99□□□□□ -2.09
VPS13B-207ENST00000518569 PTPRZ1P23471 2315 aaPredicted RBP1.99□□□□□ -2.09
VPS13B-207ENST00000518569 IGLV3-12A0A075B6K2 115 aa1.99□□□□□ -2.09
VPS13B-207ENST00000518569 TRGV5A0A0B4J1U4 118 aa1.99□□□□□ -2.09
VPS13B-207ENST00000518569 IGHV3-43A0A0B4J1X8 118 aa1.99□□□□□ -2.09
VPS13B-207ENST00000518569 IGKV1D-43A0A0B4J1Z2 117 aa1.99□□□□□ -2.09
VPS13B-207ENST00000518569 A0A0D9SEW6 157 aa1.99□□□□□ -2.09
VPS13B-207ENST00000518569 LEPROTO15243 131 aa1.99□□□□□ -2.09
VPS13B-207ENST00000518569 SOCS1O15524 211 aa1.99□□□□□ -2.09
VPS13B-207ENST00000518569 MRPS14O60783 128 aaKnown RBP1.99□□□□□ -2.09
VPS13B-207ENST00000518569 PITX3O75364 302 aa1.99□□□□□ -2.09
VPS13B-207ENST00000518569 IGHV3-7P01780 117 aa1.99□□□□□ -2.09
VPS13B-207ENST00000518569 APCSP02743 223 aa1.99□□□□□ -2.09
VPS13B-207ENST00000518569 SLC25A5P05141 298 aaKnown RBP1.99□□□□□ -2.09
VPS13B-207ENST00000518569 GYPBP06028 91 aa1.99□□□□□ -2.09
VPS13B-207ENST00000518569 SAA1P0DJI8 122 aaPredicted RBP1.99□□□□□ -2.09
VPS13B-207ENST00000518569 FOXA1P55317 472 aa1.99□□□□□ -2.09
VPS13B-207ENST00000518569 DEFA5Q01523 94 aa1.99□□□□□ -2.09
VPS13B-207ENST00000518569 ZNF816Q0VGE8 651 aaPredicted RBP1.99□□□□□ -2.09
VPS13B-207ENST00000518569 CDK5R1Q15078 307 aa1.99□□□□□ -2.09
VPS13B-207ENST00000518569 HMGN3Q15651 99 aa1.99□□□□□ -2.09
VPS13B-207ENST00000518569 MRPL51Q4U2R6 128 aaKnown RBP1.99□□□□□ -2.09
VPS13B-207ENST00000518569 KRTAP13-2Q52LG2 175 aa1.99□□□□□ -2.09
VPS13B-207ENST00000518569 FAM74A1Q5RGS3 127 aa1.99□□□□□ -2.09
VPS13B-207ENST00000518569 NOXRED1Q6NXP6 359 aa1.99□□□□□ -2.09
VPS13B-207ENST00000518569 DPPA3Q6W0C5 159 aa1.99□□□□□ -2.09
VPS13B-207ENST00000518569 AMN1Q8IY45 258 aa1.99□□□□□ -2.09
VPS13B-207ENST00000518569 LINC00052Q96N35 136 aa1.99□□□□□ -2.09
VPS13B-207ENST00000518569 RNF5Q99942 180 aa1.99□□□□□ -2.09
VPS13B-207ENST00000518569 SMDT1Q9H4I9 107 aa1.99□□□□□ -2.09
VPS13B-207ENST00000518569 SND1-IT1Q9HBX3 110 aa1.99□□□□□ -2.09
VPS13B-207ENST00000518569 C8orf17Q9NRJ1 99 aa1.99□□□□□ -2.09
VPS13B-207ENST00000518569 TAS2R4Q9NYW5 299 aa1.99□□□□□ -2.09
VPS13B-207ENST00000518569 TP73-AS1Q9UF72 201 aa1.99□□□□□ -2.09
VPS13B-207ENST00000518569 PHLDA3Q9Y5J5 127 aa1.99□□□□□ -2.09
VPS13B-207ENST00000518569 TRAPPC1Q9Y5R8 145 aa1.99□□□□□ -2.09
VPS13B-207ENST00000518569 ZNF292O60281 2723 aa1.99□□□□□ -2.09
VPS13B-207ENST00000518569 FAM186AA6NE01 2351 aa1.99□□□□□ -2.09
VPS13B-207ENST00000518569 SPTBN2O15020 2390 aa1.99□□□□□ -2.09
VPS13B-207ENST00000518569 TMEM131Q92545 1883 aa1.99□□□□□ -2.09
VPS13B-207ENST00000518569 ASPMQ8IZT6 3477 aa1.98□□□□□ -2.09
VPS13B-207ENST00000518569 ATG2AQ2TAZ0 1938 aa1.98□□□□□ -2.09
VPS13B-207ENST00000518569 IGKV1-9A0A0C4DH69 117 aa1.98□□□□□ -2.09
VPS13B-207ENST00000518569 IGKV1-6A0A0C4DH72 117 aa1.98□□□□□ -2.09
VPS13B-207ENST00000518569 A0A0J9YW62 118 aa1.98□□□□□ -2.09
VPS13B-207ENST00000518569 ZNF736B4DX44 427 aaPredicted RBP1.98□□□□□ -2.09
VPS13B-207ENST00000518569 SDCBPO00560 298 aaPredicted RBP1.98□□□□□ -2.09
VPS13B-207ENST00000518569 CYB5AP00167 134 aa1.98□□□□□ -2.09
VPS13B-207ENST00000518569 NPYP01303 97 aa1.98□□□□□ -2.09
VPS13B-207ENST00000518569 IGKV1-39P01597 117 aa1.98□□□□□ -2.09
VPS13B-207ENST00000518569 IGKV1D-39P04432 117 aa1.98□□□□□ -2.09
VPS13B-207ENST00000518569 INAFM2P0DMQ5 153 aa1.98□□□□□ -2.09
VPS13B-207ENST00000518569 GZMBP10144 247 aa1.98□□□□□ -2.09
VPS13B-207ENST00000518569 SLC25A16P16260 332 aa1.98□□□□□ -2.09
VPS13B-207ENST00000518569 PCBD1P61457 104 aa1.98□□□□□ -2.09
VPS13B-207ENST00000518569 Q0VG73 95 aa1.98□□□□□ -2.09
VPS13B-207ENST00000518569 SP6Q3SY56 376 aa1.98□□□□□ -2.09
VPS13B-207ENST00000518569 ASB16-AS1Q495Z4 193 aa1.98□□□□□ -2.09
VPS13B-207ENST00000518569 LUZP6Q538Z0 58 aa1.98□□□□□ -2.09
VPS13B-207ENST00000518569 KHDC3LQ587J8 217 aa1.98□□□□□ -2.09
VPS13B-207ENST00000518569 LGALS9CQ6DKI2 356 aa1.98□□□□□ -2.09
VPS13B-207ENST00000518569 FAM216BQ8N7L0 139 aa1.98□□□□□ -2.09
VPS13B-207ENST00000518569 SIGLECL1Q8N7X8 197 aa1.98□□□□□ -2.09
VPS13B-207ENST00000518569 WFDC11Q8NEX6 87 aa1.98□□□□□ -2.09
VPS13B-207ENST00000518569 C10orf82Q8WW14 230 aa1.98□□□□□ -2.09
VPS13B-207ENST00000518569 DIRC1Q969H9 104 aa1.98□□□□□ -2.09
VPS13B-207ENST00000518569 PKMYT1Q99640 499 aa1.98□□□□□ -2.09
VPS13B-207ENST00000518569 TSSK6Q9BXA6 273 aa1.98□□□□□ -2.09
VPS13B-207ENST00000518569 FASNP49327 2511 aaKnown RBP1.98□□□□□ -2.09
VPS13B-207ENST00000518569 NLRC5Q86WI3 1866 aa1.98□□□□□ -2.09
VPS13B-207ENST00000518569 DNAH14Q0VDD8 3507 aa1.98□□□□□ -2.09
VPS13B-207ENST00000518569 ZNF236Q9UL36 1845 aa1.98□□□□□ -2.09
VPS13B-207ENST00000518569 FAM208BQ5VWN6 2430 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms