RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 TCRAP04437 139 aa4.33□□□□□ -1.72
MRPS28-203ENST00000518371 TPT1P13693 172 aaKnown RBP4.33□□□□□ -1.72
MRPS28-203ENST00000518371 LGALSLQ3ZCW2 172 aaPredicted RBP4.33□□□□□ -1.72
MRPS28-203ENST00000518371 EIF5AL1Q6IS14 154 aaKnown RBP4.33□□□□□ -1.72
MRPS28-203ENST00000518371 EIF4E3Q8N5X7 224 aaKnown RBP4.33□□□□□ -1.72
MRPS28-203ENST00000518371 ZFAND2AQ8N6M9 145 aa4.33□□□□□ -1.72
MRPS28-203ENST00000518371 FAM213BQ8TBF2 198 aa4.33□□□□□ -1.72
MRPS28-203ENST00000518371 SFT2D1Q8WV19 159 aa4.33□□□□□ -1.72
MRPS28-203ENST00000518371 TMED6Q8WW62 240 aa4.33□□□□□ -1.72
MRPS28-203ENST00000518371 SGK494Q96LW2 274 aa4.33□□□□□ -1.72
MRPS28-203ENST00000518371 NDFIP1Q9BT67 221 aa4.33□□□□□ -1.72
MRPS28-203ENST00000518371 NDUFAF3Q9BU61 184 aa4.33□□□□□ -1.72
MRPS28-203ENST00000518371 NKX6-2Q9C056 277 aaPredicted RBP4.33□□□□□ -1.72
MRPS28-203ENST00000518371 TREM1Q9NP99 234 aa4.33□□□□□ -1.72
MRPS28-203ENST00000518371 GSN-AS1Q9NRJ2 163 aa4.33□□□□□ -1.72
MRPS28-203ENST00000518371 LENEPQ9Y5L5 61 aa4.33□□□□□ -1.72
MRPS28-203ENST00000518371 DNAH7Q8WXX0 4024 aa4.33□□□□□ -1.72
MRPS28-203ENST00000518371 TRAV8-1A0A0A6YYK1 113 aa4.32□□□□□ -1.72
MRPS28-203ENST00000518371 A0A1B0GV50 99 aa4.32□□□□□ -1.72
MRPS28-203ENST00000518371 PLAC8L1A1L4L8 177 aa4.32□□□□□ -1.72
MRPS28-203ENST00000518371 GGTLC3B5MD39 225 aa4.32□□□□□ -1.72
MRPS28-203ENST00000518371 F5H768 121 aa4.32□□□□□ -1.72
MRPS28-203ENST00000518371 F6UZH7 168 aa4.32□□□□□ -1.72
MRPS28-203ENST00000518371 GAGE7O76087 117 aa4.32□□□□□ -1.72
MRPS28-203ENST00000518371 ATP5G1P05496 136 aa4.32□□□□□ -1.72
MRPS28-203ENST00000518371 GAGE12FP0CL80 117 aa4.32□□□□□ -1.72
MRPS28-203ENST00000518371 GAGE12GP0CL81 117 aa4.32□□□□□ -1.72
MRPS28-203ENST00000518371 GAGE12IP0CL82 117 aa4.32□□□□□ -1.72
MRPS28-203ENST00000518371 GCSHP23434 173 aa4.32□□□□□ -1.72
MRPS28-203ENST00000518371 ATP5G3P48201 142 aa4.32□□□□□ -1.72
MRPS28-203ENST00000518371 FHITP49789 147 aa4.32□□□□□ -1.72
MRPS28-203ENST00000518371 PPT1P50897 306 aa4.32□□□□□ -1.72
MRPS28-203ENST00000518371 ANXA2RQ3ZCQ2 193 aa4.32□□□□□ -1.72
MRPS28-203ENST00000518371 MUC21Q5SSG8 566 aa4.32□□□□□ -1.72
MRPS28-203ENST00000518371 PRR9Q5T870 116 aa4.32□□□□□ -1.72
MRPS28-203ENST00000518371 CST9LP1Q5W188 147 aa4.32□□□□□ -1.72
MRPS28-203ENST00000518371 FAM159AQ6UWV7 190 aa4.32□□□□□ -1.72
MRPS28-203ENST00000518371 DPPA3Q6W0C5 159 aa4.32□□□□□ -1.72
MRPS28-203ENST00000518371 Q6ZQT7 251 aa4.32□□□□□ -1.72
MRPS28-203ENST00000518371 PRNTQ86SH4 94 aa4.32□□□□□ -1.72
MRPS28-203ENST00000518371 CYB561D1Q8N8Q1 229 aa4.32□□□□□ -1.72
MRPS28-203ENST00000518371 ZNF680Q8NEM1 530 aa4.32□□□□□ -1.72
MRPS28-203ENST00000518371 RNASE8Q8TDE3 154 aaKnown RBP4.32□□□□□ -1.72
MRPS28-203ENST00000518371 MBD3L1Q8WWY6 194 aa4.32□□□□□ -1.72
MRPS28-203ENST00000518371 LINC00467Q9BRT7 94 aa4.32□□□□□ -1.72
MRPS28-203ENST00000518371 NAGKQ9UJ70 344 aa4.32□□□□□ -1.72
MRPS28-203ENST00000518371 APLNQ9ULZ1 77 aa4.32□□□□□ -1.72
MRPS28-203ENST00000518371 PSG8Q9UQ74 426 aa4.32□□□□□ -1.72
MRPS28-203ENST00000518371 TENM2Q9NT68 2774 aa4.31□□□□□ -1.72
MRPS28-203ENST00000518371 TRGV2A0A075B6R0 118 aa4.31□□□□□ -1.72
MRPS28-203ENST00000518371 TRGV1A0A0A0MS02 117 aa4.31□□□□□ -1.72
MRPS28-203ENST00000518371 TRAV34A0A0B4J273 112 aa4.31□□□□□ -1.72
MRPS28-203ENST00000518371 TRAV21A0A0B4J279 112 aa4.31□□□□□ -1.72
MRPS28-203ENST00000518371 FBLL1A6NHQ2 334 aaKnown RBP4.31□□□□□ -1.72
MRPS28-203ENST00000518371 FAM74A7A6NL05 159 aa4.31□□□□□ -1.72
MRPS28-203ENST00000518371 PAGE4O60829 102 aa4.31□□□□□ -1.72
MRPS28-203ENST00000518371 FLI1Q01543 452 aaPredicted RBP4.31□□□□□ -1.72
MRPS28-203ENST00000518371 OR5I1Q13606 314 aa4.31□□□□□ -1.72
MRPS28-203ENST00000518371 TMEM183BQ1AE95 376 aa4.31□□□□□ -1.72
MRPS28-203ENST00000518371 ZFP69Q49AA0 526 aa4.31□□□□□ -1.72
MRPS28-203ENST00000518371 TOR2AQ5JU69 321 aa4.31□□□□□ -1.72
MRPS28-203ENST00000518371 SAPCD1Q5SSQ6 148 aa4.31□□□□□ -1.72
MRPS28-203ENST00000518371 Q6AWC8 147 aa4.31□□□□□ -1.72
MRPS28-203ENST00000518371 LGALS9CQ6DKI2 356 aa4.31□□□□□ -1.72
MRPS28-203ENST00000518371 SLC51BQ86UW2 128 aa4.31□□□□□ -1.72
MRPS28-203ENST00000518371 TMEM183AQ8IXX5 376 aa4.31□□□□□ -1.72
MRPS28-203ENST00000518371 HIST1H2BAQ96A08 127 aa4.31□□□□□ -1.72
MRPS28-203ENST00000518371 TVP23CQ96ET8 276 aa4.31□□□□□ -1.72
MRPS28-203ENST00000518371 FAM210BQ96KR6 192 aa4.31□□□□□ -1.72
MRPS28-203ENST00000518371 ATG101Q9BSB4 218 aa4.31□□□□□ -1.72
MRPS28-203ENST00000518371 TP53TG3Q9ULZ0 132 aa4.31□□□□□ -1.72
MRPS28-203ENST00000518371 KLF12Q9Y4X4 402 aa4.31□□□□□ -1.72
MRPS28-203ENST00000518371 TRGV11A0A075B6L2 103 aa4.3□□□□□ -1.72
MRPS28-203ENST00000518371 A0A1B0GVG6 124 aa4.3□□□□□ -1.72
MRPS28-203ENST00000518371 TEX46H3BTG2 121 aa4.3□□□□□ -1.72
MRPS28-203ENST00000518371 PEX7O00628 323 aa4.3□□□□□ -1.72
MRPS28-203ENST00000518371 GNRH2O43555 120 aa4.3□□□□□ -1.72
MRPS28-203ENST00000518371 GCGP01275 180 aa4.3□□□□□ -1.72
MRPS28-203ENST00000518371 RAB5CP51148 216 aa4.3□□□□□ -1.72
MRPS28-203ENST00000518371 TCL1AP56279 114 aa4.3□□□□□ -1.72
MRPS28-203ENST00000518371 UBE2G1P62253 170 aa4.3□□□□□ -1.72
MRPS28-203ENST00000518371 ZNF415Q09FC8 603 aa4.3□□□□□ -1.72
MRPS28-203ENST00000518371 DAZ2Q13117 558 aaKnown RBP4.3□□□□□ -1.72
MRPS28-203ENST00000518371 SMUG1Q53HV7 270 aa4.3□□□□□ -1.72
MRPS28-203ENST00000518371 IBA57Q5T440 356 aaKnown RBP4.3□□□□□ -1.72
MRPS28-203ENST00000518371 TMEM88Q6PEY1 159 aa4.3□□□□□ -1.72
MRPS28-203ENST00000518371 Q6ZTI0 123 aa4.3□□□□□ -1.72
MRPS28-203ENST00000518371 UBE2DNLQ8IWF7 75 aa4.3□□□□□ -1.72
MRPS28-203ENST00000518371 TMEM75Q8N9X5 138 aa4.3□□□□□ -1.72
MRPS28-203ENST00000518371 C11orf72Q8NBR9 251 aa4.3□□□□□ -1.72
MRPS28-203ENST00000518371 KCNS1Q96KK3 526 aa4.3□□□□□ -1.72
MRPS28-203ENST00000518371 LINC00479Q96M42 142 aa4.3□□□□□ -1.72
MRPS28-203ENST00000518371 STARD9Q9P2P6 4700 aa4.3□□□□□ -1.72
MRPS28-203ENST00000518371 DYNC2H1Q8NCM8 4307 aaKnown RBP4.3□□□□□ -1.72
MRPS28-203ENST00000518371 FABP5P3A8MUU1 101 aa4.29□□□□□ -1.72
MRPS28-203ENST00000518371 IGLV2-11P01706 119 aa4.29□□□□□ -1.72
MRPS28-203ENST00000518371 P0DMU3 169 aa4.29□□□□□ -1.72
MRPS28-203ENST00000518371 FAM231AP0DMU4 169 aa4.29□□□□□ -1.72
MRPS28-203ENST00000518371 FAM231CP0DMU5 169 aa4.29□□□□□ -1.72
MRPS28-203ENST00000518371 AKR1C3P42330 323 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms